Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Pdx1

Gene Name Gene ID Reads Annotation
Pdx1 ENSMUSG00000029644 41 pancreatic and duodenal homeobox 1 [Source:MGI Symbol;Acc:MGI:102851]







Genes with expression patterns similar to Pdx1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Pdx1 ENSMUSG00000029644 41 4 - - 1.000 1.000 1.000 1.000 pancreatic and duodenal homeobox 1 [Source:MGI Symbol;Acc:MGI:102851]
2. Gm8806 ENSMUSG00000083367 34 1.798 - - 0.868 - - 0.930 predicted gene 8806 [Source:MGI Symbol;Acc:MGI:3643511]
3. Slc41a3 ENSMUSG00000030089 325 1.732 - - 0.861 0.871 - - solute carrier family 41, member 3 [Source:MGI Symbol;Acc:MGI:1918949]
4. Gm13868 ENSMUSG00000083306 57 1.685 - - 0.718 0.967 - - predicted gene 13868 [Source:MGI Symbol;Acc:MGI:3651789]
5. Npff ENSMUSG00000023052 4 1 - - - - 1.000 - neuropeptide FF-amide peptide precursor [Source:MGI Symbol;Acc:MGI:1891708]
6. Gm6808 ENSMUSG00000090162 21 1 - - - - - 1.000 predicted gene 6808 [Source:MGI Symbol;Acc:MGI:3645881]
7. Gm6133 ENSMUSG00000090451 13 1 - - - - 1.000 - predicted gene 6133 [Source:MGI Symbol;Acc:MGI:3647029]
8. 2810459M11Rik ENSMUSG00000026227 11 1 - - - - 1.000 - RIKEN cDNA 2810459M11 gene [Source:MGI Symbol;Acc:MGI:1920042]
9. I830012O16Rik I830012O16Rik 1 1 - - - - 1.000 -
10. Gm4776 Gm4776 2 1 - - - - 1.000 -
11. Cd1d2 ENSMUSG00000041750 6 1 - - - - - 1.000 CD1d2 antigen [Source:MGI Symbol;Acc:MGI:107675]
12. Gm12874 ENSMUSG00000084196 2 1 - - - - 1.000 - predicted gene 12874 [Source:MGI Symbol;Acc:MGI:3651901]
13. A530072M11Rik ENSMUSG00000085112 8 1 - - - - - 1.000 RIKEN cDNA gene A530072M11 [Source:MGI Symbol;Acc:MGI:4440477]
14. Hao2 ENSMUSG00000027870 3 1 - - - - 1.000 - hydroxyacid oxidase 2 [Source:MGI Symbol;Acc:MGI:96012]
15. Gm6407 ENSMUSG00000093548 1 1 - - - - 1.000 - predicted gene 6407 [Source:MGI Symbol;Acc:MGI:3642965]
16. Gm10417 ENSMUSG00000103580 12 1 - - - - 1.000 - predicted gene 10417 [Source:MGI Symbol;Acc:MGI:3642677]
17. Gm7290 ENSMUSG00000078192 8 1 - - - - - 1.000 predicted pseudogene 7290 [Source:MGI Symbol;Acc:MGI:3646633]
18. Gm24246 ENSMUSG00000087940 1 1 - - - - 1.000 - predicted gene, 24246 [Source:MGI Symbol;Acc:MGI:5454023]
19. Ubl7 ENSMUSG00000055720 10 1 - - - - 1.000 - ubiquitin-like 7 (bone marrow stromal cell-derived) [Source:MGI Symbol;Acc:MGI:1916709]
20. Gm14571 ENSMUSG00000083845 2 1 - - - - 1.000 - predicted gene 14571 [Source:MGI Symbol;Acc:MGI:3644699]
21. Tmem40 ENSMUSG00000059900 110 1 - - - - 1.000 - transmembrane protein 40 [Source:MGI Symbol;Acc:MGI:2137870]
22. Gm15741 ENSMUSG00000082825 4 1 - - - - 1.000 - predicted gene 15741 [Source:MGI Symbol;Acc:MGI:3783183]
23. Crhr1 ENSMUSG00000018634 1 1 - - - - 1.000 - corticotropin releasing hormone receptor 1 [Source:MGI Symbol;Acc:MGI:88498]
24. Itgae ENSMUSG00000005947 13 1 - - - - 1.000 - integrin alpha E, epithelial-associated [Source:MGI Symbol;Acc:MGI:1298377]
25. Ifi204 ENSMUSG00000073489 8 1 - - - - 1.000 - interferon activated gene 204 [Source:MGI Symbol;Acc:MGI:96429]
26. Prl6a1 ENSMUSG00000069259 2 1 - - - - 1.000 - prolactin family 6, subfamily a, member 1 [Source:MGI Symbol;Acc:MGI:1206579]
27. Gm8824 ENSMUSG00000098028 8 1 - - - - - 1.000 predicted gene 8824 [Source:MGI Symbol;Acc:MGI:3647096]
28. Fut2 ENSMUSG00000055978 1 1 - - - - 1.000 - fucosyltransferase 2 [Source:MGI Symbol;Acc:MGI:109374]
29. Gm13619 ENSMUSG00000052865 2 1 - - - - 1.000 - predicted gene 13619 [Source:MGI Symbol;Acc:MGI:3702958]
30. Lipf ENSMUSG00000024768 8 1 - - - - 1.000 - lipase, gastric [Source:MGI Symbol;Acc:MGI:1914967]
31. 5430427O19Rik ENSMUSG00000025058 9 1 - - - - - 1.000 RIKEN cDNA 5430427O19 gene [Source:MGI Symbol;Acc:MGI:1918648]
32. Cyp2f2 ENSMUSG00000052974 4 1 - - - - - 1.000 cytochrome P450, family 2, subfamily f, polypeptide 2 [Source:MGI Symbol;Acc:MGI:88608]
33. Gm15777 ENSMUSG00000085269 1 1 - - - - 1.000 - predicted gene 15777 [Source:MGI Symbol;Acc:MGI:3783219]
34. Nkpd1 ENSMUSG00000060621 2 1 - - - - 1.000 - NTPase, KAP family P-loop domain containing 1 [Source:MGI Symbol;Acc:MGI:1916797]
35. Havcr2 ENSMUSG00000020399 3 1 - - - - 1.000 - hepatitis A virus cellular receptor 2 [Source:MGI Symbol;Acc:MGI:2159682]
36. H2-T10 ENSMUSG00000079491 3 1 - - - - 1.000 - histocompatibility 2, T region locus 10 [Source:MGI Symbol;Acc:MGI:95942]
37. R3hdml ENSMUSG00000078949 4 1 - - - - 1.000 - R3H domain containing-like [Source:MGI Symbol;Acc:MGI:3650937]
38. Gm8802 ENSMUSG00000081226 4 1 - - - - 1.000 - predicted gene 8802 [Source:MGI Symbol;Acc:MGI:3647981]
39. Upk2 ENSMUSG00000041523 4 1 - - - - - 1.000 uroplakin 2 [Source:MGI Symbol;Acc:MGI:98913]
40. A730032A03Rik ENSMUSG00000085649 4 1 - - - - - 1.000 RIKEN cDNA A730032A03 gene [Source:MGI Symbol;Acc:MGI:2444311]
41. A830019P07Rik ENSMUSG00000094707 1 1 - - - - 1.000 - RIKEN cDNA A830019P07 gene [Source:MGI Symbol;Acc:MGI:3028035]
42. Gm9936 ENSMUSG00000107108 1 1 - - - - 1.000 - predicted gene 9936 [Source:MGI Symbol;Acc:MGI:3641854]
43. RP23-452E7.2 RP23-452E7.2 1 1 - - - - 1.000 -
44. 5430402O13Rik ENSMUSG00000085776 4 1 - - - - 1.000 - RIKEN cDNA 5430402O13 gene [Source:MGI Symbol;Acc:MGI:1918631]
45. Vmn2r42 ENSMUSG00000070844 9 1 - - - - - 1.000 vomeronasal 2, receptor 42 [Source:MGI Symbol;Acc:MGI:1316666]
46. Fcer2a ENSMUSG00000005540 20 0.998 - - - - - 0.998 Fc receptor, IgE, low affinity II, alpha polypeptide [Source:MGI Symbol;Acc:MGI:95497]
47. Icos ENSMUSG00000026009 50 0.997 - - - - - 0.997 inducible T cell co-stimulator [Source:MGI Symbol;Acc:MGI:1858745]
48. Ppef2 ENSMUSG00000029410 7 0.993 - - - - - 0.993 protein phosphatase, EF hand calcium-binding domain 2 [Source:MGI Symbol;Acc:MGI:1342304]
49. Prg4 ENSMUSG00000006014 30 0.99 - - - - - 0.990 proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) [Source:MGI Symbol;Acc:MGI:1891344]
50. Timm8a2 ENSMUSG00000071229 14 0.988 - - - - - 0.988 translocase of inner mitochondrial membrane 8A2 [Source:MGI Symbol;Acc:MGI:3615492]
51. Gm25099 ENSMUSG00000095676 10 0.985 - - - - - 0.985 predicted gene, 25099 [Source:MGI Symbol;Acc:MGI:5454876]
52. Chmp4c ENSMUSG00000027536 14 0.985 - - - 0.985 - - charged multivesicular body protein 4C [Source:MGI Symbol;Acc:MGI:1913621]
53. Snord19 ENSMUSG00000077797 12 0.981 - - - 0.981 - - small nucleolar RNA, C/D box 19 [Source:MGI Symbol;Acc:MGI:3819524]
54. Mocos ENSMUSG00000039616 12 0.981 - - - 0.981 - - molybdenum cofactor sulfurase [Source:MGI Symbol;Acc:MGI:1915841]
55. Pde6c ENSMUSG00000024992 28 0.981 - - - 0.981 - - phosphodiesterase 6C, cGMP specific, cone, alpha prime [Source:MGI Symbol;Acc:MGI:105956]
56. Pld6 ENSMUSG00000043648 38 0.977 - - - 0.977 - - phospholipase D family, member 6 [Source:MGI Symbol;Acc:MGI:2687283]
57. St8sia5 ENSMUSG00000025425 36 0.977 - - - 0.977 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:MGI Symbol;Acc:MGI:109243]
58. Gm12469 ENSMUSG00000083624 31 0.975 - - - - - 0.975 predicted gene 12469 [Source:MGI Symbol;Acc:MGI:3652114]
59. Rpl31-ps20 ENSMUSG00000058607 7 0.973 - - - - - 0.973 ribosomal protein L31, pseudogene 20 [Source:MGI Symbol;Acc:MGI:3644512]
60. BC048546 13 0.973 - - - 0.973 - - cDNA sequence BC048546
61. Polh ENSMUSG00000023953 65 0.972 - - - - - 0.972 polymerase (DNA directed), eta (RAD 30 related) [Source:MGI Symbol;Acc:MGI:1891457]
62. Ppp1r3g ENSMUSG00000050423 28 0.972 - - - 0.972 - - protein phosphatase 1, regulatory subunit 3G [Source:MGI Symbol;Acc:MGI:1923737]
63. Gm12463 ENSMUSG00000080916 11 0.97 - - - - - 0.970 predicted gene 12463 [Source:MGI Symbol;Acc:MGI:3650648]
64. Rinl ENSMUSG00000051735 71 0.969 - - - 0.969 - - Ras and Rab interactor-like [Source:MGI Symbol;Acc:MGI:2444024]
65. Ggt1 ENSMUSG00000006345 49 0.968 - - - 0.968 - - gamma-glutamyltransferase 1 [Source:MGI Symbol;Acc:MGI:95706]
66. Echdc3 ENSMUSG00000039063 41 0.968 - - - 0.968 - - enoyl Coenzyme A hydratase domain containing 3 [Source:MGI Symbol;Acc:MGI:1915106]
67. Zfp526 ENSMUSG00000046541 67 0.966 - - - 0.966 - - zinc finger protein 526 [Source:MGI Symbol;Acc:MGI:2445181]
68. Gm2244 ENSMUSG00000092036 15 0.963 - - - - - 0.963 predicted gene 2244 [Source:MGI Symbol;Acc:MGI:3780414]
69. Tor3a ENSMUSG00000060519 66 0.961 - - - 0.961 - - torsin family 3, member A [Source:MGI Symbol;Acc:MGI:1353652]
70. Mlxipl ENSMUSG00000005373 39 0.961 - - - 0.961 - - MLX interacting protein-like [Source:MGI Symbol;Acc:MGI:1927999]
71. Gm5844 ENSMUSG00000082896 73 0.96 - - - - - 0.960 predicted gene 5844 [Source:MGI Symbol;Acc:MGI:3645252]
72. Hist2h4 ENSMUSG00000091405 27 0.957 - - - 0.957 - - histone cluster 2, H4 [Source:MGI Symbol;Acc:MGI:2140113]
73. Celf3 ENSMUSG00000028137 141 0.956 - - - 0.956 - - CUGBP, Elav-like family member 3 [Source:MGI Symbol;Acc:MGI:1926034]
74. 9030025P20Rik ENSMUSG00000116953 36 0.954 - - - 0.954 - - RIKEN cDNA 9030025P20 gene [Source:MGI Symbol;Acc:MGI:3583895]
75. Slc11a1 ENSMUSG00000026177 34 0.954 - - - 0.954 - - solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 [Source:MGI Symbol;Acc:MGI:1345275]
76. Cela1 ENSMUSG00000023031 19 0.954 - - - - - 0.954 chymotrypsin-like elastase family, member 1 [Source:MGI Symbol;Acc:MGI:95314]
77. Ms4a6b ENSMUSG00000024677 67 0.952 - - - 0.952 - - membrane-spanning 4-domains, subfamily A, member 6B [Source:MGI Symbol;Acc:MGI:1917024]
78. Dlgap2 ENSMUSG00000047495 40 0.952 - - - 0.952 - - DLG associated protein 2 [Source:MGI Symbol;Acc:MGI:2443181]
79. Emr1 Emr1 41 0.95 - - - 0.950 - -
80. Lyve1 ENSMUSG00000030787 184 0.949 - - 0.949 - - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:MGI Symbol;Acc:MGI:2136348]
81. Zc3h3 ENSMUSG00000075600 68 0.946 - - - 0.946 - - zinc finger CCCH type containing 3 [Source:MGI Symbol;Acc:MGI:2663721]
82. Tmem54 ENSMUSG00000028786 75 0.946 - - - 0.946 - - transmembrane protein 54 [Source:MGI Symbol;Acc:MGI:1913510]
83. Gm9294 ENSMUSG00000044609 103 0.945 - - - - - 0.945 predicted pseudogene 9294 [Source:MGI Symbol;Acc:MGI:3648888]
84. Rbm11 ENSMUSG00000032940 28 0.943 - - - - - 0.943 RNA binding motif protein 11 [Source:MGI Symbol;Acc:MGI:2447622]
85. Slc5a4b ENSMUSG00000020226 35 0.943 - - - - - 0.943 solute carrier family 5 (neutral amino acid transporters, system A), member 4b [Source:MGI Symbol;Acc:MGI:1890478]
86. 1700007L15Rik ENSMUSG00000097318 104 0.943 - - - 0.943 - - RIKEN cDNA 1700007L15 gene [Source:MGI Symbol;Acc:MGI:1916581]
87. Prima1 ENSMUSG00000041669 38 0.942 - - - - - 0.942 proline rich membrane anchor 1 [Source:MGI Symbol;Acc:MGI:1926097]
88. Gm6297 ENSMUSG00000097123 46 0.94 - - - - - 0.940 predicted gene 6297 [Source:MGI Symbol;Acc:MGI:3779584]
89. Gm26869 ENSMUSG00000097879 104 0.94 - - - 0.940 - - predicted gene, 26869 [Source:MGI Symbol;Acc:MGI:5477363]
90. Tnk1 ENSMUSG00000001583 49 0.939 - - - 0.939 - - tyrosine kinase, non-receptor, 1 [Source:MGI Symbol;Acc:MGI:1930958]
91. Gm7292 ENSMUSG00000104222 68 0.938 - - - - - 0.938 predicted gene 7292 [Source:MGI Symbol;Acc:MGI:3645786]
92. Ptger3 ENSMUSG00000040016 181 0.938 - - - - - 0.938 prostaglandin E receptor 3 (subtype EP3) [Source:MGI Symbol;Acc:MGI:97795]
93. Ptprt ENSMUSG00000053141 127 0.937 - - - 0.937 - - protein tyrosine phosphatase, receptor type, T [Source:MGI Symbol;Acc:MGI:1321152]
94. Ifltd1 Ifltd1 11 0.937 - - - - 0.937 -
95. Gm11263 ENSMUSG00000083496 21 0.935 - - - - - 0.935 predicted gene 11263 [Source:MGI Symbol;Acc:MGI:3651899]
96. AA465934 ENSMUSG00000093483 144 0.935 - - - 0.935 - - expressed sequence AA465934 [Source:MGI Symbol;Acc:MGI:2671018]
97. Tspan4 ENSMUSG00000025511 128 0.934 - - - 0.934 - - tetraspanin 4 [Source:MGI Symbol;Acc:MGI:1928097]
98. Thap1 ENSMUSG00000037214 256 0.934 - - - 0.934 - - THAP domain containing, apoptosis associated protein 1 [Source:MGI Symbol;Acc:MGI:1921004]
99. Mamstr ENSMUSG00000042918 45 0.933 - - - 0.933 - - MEF2 activating motif and SAP domain containing transcriptional regulator [Source:MGI Symbol;Acc:MGI:1921740]
100. Ccdc89 ENSMUSG00000044362 82 0.932 - - - 0.932 - - coiled-coil domain containing 89 [Source:MGI Symbol;Acc:MGI:1917304]

There are 482 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA