Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Pdlim1

Gene Name Gene ID Reads Annotation
Pdlim1 ENSMUSG00000055044 2590 PDZ and LIM domain 1 (elfin) [Source:MGI Symbol;Acc:MGI:1860611]







Genes with expression patterns similar to Pdlim1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Pdlim1 ENSMUSG00000055044 2590 6 1.000 1.000 1.000 1.000 1.000 1.000 PDZ and LIM domain 1 (elfin) [Source:MGI Symbol;Acc:MGI:1860611]
2. Rpl36al ENSMUSG00000049751 6390 0.878 - 0.878 - - - - ribosomal protein L36A-like [Source:MGI Symbol;Acc:MGI:1913733]
3. Ube2i ENSMUSG00000015120 2950 0.819 - 0.819 - - - - ubiquitin-conjugating enzyme E2I [Source:MGI Symbol;Acc:MGI:107365]
4. Rps27a-ps2 ENSMUSG00000058838 2115 0.806 - 0.806 - - - - ribosomal protein S27A, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3643614]
5. Hook3 ENSMUSG00000037234 2994 0.793 - 0.793 - - - - hook microtubule tethering protein 3 [Source:MGI Symbol;Acc:MGI:2443554]
6. Gfpt2 ENSMUSG00000020363 891 0.789 - 0.789 - - - - glutamine fructose-6-phosphate transaminase 2 [Source:MGI Symbol;Acc:MGI:1338883]
7. Tomm20 ENSMUSG00000093904 7015 0.774 - 0.774 - - - - translocase of outer mitochondrial membrane 20 [Source:MGI Symbol;Acc:MGI:1915202]
8. Mrpl45 ENSMUSG00000018882 3172 0.774 - 0.774 - - - - mitochondrial ribosomal protein L45 [Source:MGI Symbol;Acc:MGI:1914286]
9. Pdcd2 ENSMUSG00000014771 871 0.771 - - - - - 0.771 programmed cell death 2 [Source:MGI Symbol;Acc:MGI:104643]
10. Ndufv3 ENSMUSG00000024038 4549 0.769 - 0.769 - - - - NADH:ubiquinone oxidoreductase core subunit V3 [Source:MGI Symbol;Acc:MGI:1890894]
11. Rlim ENSMUSG00000056537 6223 0.768 - 0.768 - - - - ring finger protein, LIM domain interacting [Source:MGI Symbol;Acc:MGI:1342291]
12. Fubp3 ENSMUSG00000026843 2442 0.767 - - - - - 0.767 far upstream element (FUSE) binding protein 3 [Source:MGI Symbol;Acc:MGI:2443699]
13. Glyr1 ENSMUSG00000022536 3441 0.764 - 0.764 - - - - glyoxylate reductase 1 homolog (Arabidopsis) [Source:MGI Symbol;Acc:MGI:1921272]
14. Rnf181 ENSMUSG00000055850, ENSMUSG00000102720 4348 0.759 - 0.759 - - - - ring finger protein 181 [Source:MGI Symbol;Acc:MGI:1913760]
15. Sfn ENSMUSG00000047281 305 0.758 - - - - - 0.758 stratifin [Source:MGI Symbol;Acc:MGI:1891831]
16. Ptrh2 ENSMUSG00000072582 2059 0.758 - - - - - 0.758 peptidyl-tRNA hydrolase 2 [Source:MGI Symbol;Acc:MGI:2444848]
17. Dtnbp1 ENSMUSG00000057531 6806 0.755 - 0.755 - - - - dystrobrevin binding protein 1 [Source:MGI Symbol;Acc:MGI:2137586]
18. Fech ENSMUSG00000024588 2777 0.754 - 0.754 - - - - ferrochelatase [Source:MGI Symbol;Acc:MGI:95513]
19. Ndufa8 ENSMUSG00000026895 8108 0.752 - 0.752 - - - - NADH:ubiquinone oxidoreductase subunit A8 [Source:MGI Symbol;Acc:MGI:1915625]
20. Knop1 ENSMUSG00000030980 2926 0.748 - 0.748 - - - - lysine rich nucleolar protein 1 [Source:MGI Symbol;Acc:MGI:1913606]
21. Alcam ENSMUSG00000022636 2190 0.746 - - - - - 0.746 activated leukocyte cell adhesion molecule [Source:MGI Symbol;Acc:MGI:1313266]
22. Sppl3 ENSMUSG00000029550 3601 0.742 - 0.742 - - - - signal peptide peptidase 3 [Source:MGI Symbol;Acc:MGI:1891433]
23. Nxn ENSMUSG00000020844 5740 0.741 - 0.741 - - - - nucleoredoxin [Source:MGI Symbol;Acc:MGI:109331]
24. Lamtor4 ENSMUSG00000050552 1199 0.741 - 0.741 - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 [Source:MGI Symbol;Acc:MGI:1913346]
25. Fermt2 ENSMUSG00000037712 2474 0.74 - - - - - 0.740 fermitin family member 2 [Source:MGI Symbol;Acc:MGI:2385001]
26. Rbm25 ENSMUSG00000010608 21393 0.74 - 0.740 - - - - RNA binding motif protein 25 [Source:MGI Symbol;Acc:MGI:1914289]
27. Krt7 ENSMUSG00000023039 391 0.738 - - - - - 0.738 keratin 7 [Source:MGI Symbol;Acc:MGI:96704]
28. Ddx11 ENSMUSG00000035842 838 0.735 - 0.735 - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 [Source:MGI Symbol;Acc:MGI:2443590]
29. Sfrp5 ENSMUSG00000018822 686 0.735 - - - 0.735 - - secreted frizzled-related sequence protein 5 [Source:MGI Symbol;Acc:MGI:1860298]
30. Gnas ENSMUSG00000027523 8369 0.734 - 0.734 - - - - GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus [Source:MGI Symbol;Acc:MGI:95777]
31. Lamp2 ENSMUSG00000016534 3440 0.733 - - - - - 0.733 lysosomal-associated membrane protein 2 [Source:MGI Symbol;Acc:MGI:96748]
32. Ubr7 ENSMUSG00000041712 2341 0.729 - - - - - 0.729 ubiquitin protein ligase E3 component n-recognin 7 (putative) [Source:MGI Symbol;Acc:MGI:1913872]
33. Gm15148 ENSMUSG00000082423 4827 0.728 - 0.728 - - - - predicted gene 15148 [Source:MGI Symbol;Acc:MGI:3705350]
34. Kti12 ENSMUSG00000073775 1671 0.728 - - - - - 0.728 KTI12 homolog, chromatin associated [Source:MGI Symbol;Acc:MGI:1923547]
35. Sep-06 Sep-06 4263 0.728 - 0.728 - - - -
36. Nudt4 ENSMUSG00000020029 8071 0.727 - 0.727 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 4 [Source:MGI Symbol;Acc:MGI:1918457]
37. Usf2 ENSMUSG00000058239 5270 0.726 - - - - - 0.726 upstream transcription factor 2 [Source:MGI Symbol;Acc:MGI:99961]
38. Foxa1 ENSMUSG00000035451 548 0.723 - - - 0.723 - - forkhead box A1 [Source:MGI Symbol;Acc:MGI:1347472]
39. Gpr89 ENSMUSG00000028096 598 0.721 - 0.721 - - - - G protein-coupled receptor 89 [Source:MGI Symbol;Acc:MGI:1914799]
40. Gm10031 ENSMUSG00000101523 547 0.721 - 0.721 - - - - predicted pseudogene 10031 [Source:MGI Symbol;Acc:MGI:3704198]
41. Ube2d3 ENSMUSG00000078578 9371 0.719 - 0.719 - - - - ubiquitin-conjugating enzyme E2D 3 [Source:MGI Symbol;Acc:MGI:1913355]
42. Arfip2 ENSMUSG00000030881 1538 0.719 - 0.719 - - - - ADP-ribosylation factor interacting protein 2 [Source:MGI Symbol;Acc:MGI:1924182]
43. Arhgap10 ENSMUSG00000037148 521 0.718 - 0.718 - - - - Rho GTPase activating protein 10 [Source:MGI Symbol;Acc:MGI:1925764]
44. Ptdss1 ENSMUSG00000021518 4429 0.715 - - - - - 0.715 phosphatidylserine synthase 1 [Source:MGI Symbol;Acc:MGI:1276575]
45. 2810004N23Rik ENSMUSG00000031984 3681 0.714 - - - - - 0.714 RIKEN cDNA 2810004N23 gene [Source:MGI Symbol;Acc:MGI:1913773]
46. Gpsm2 ENSMUSG00000027883 1924 0.713 - - - - - 0.713 G-protein signalling modulator 2 (AGS3-like, C. elegans) [Source:MGI Symbol;Acc:MGI:1923373]
47. Rnf185 ENSMUSG00000020448 2485 0.71 - 0.710 - - - - ring finger protein 185 [Source:MGI Symbol;Acc:MGI:1922078]
48. Hnrnpr ENSMUSG00000066037 10123 0.71 - 0.710 - - - - heterogeneous nuclear ribonucleoprotein R [Source:MGI Symbol;Acc:MGI:1891692]
49. Gm2862 ENSMUSG00000089639 2849 0.709 - 0.709 - - - - predicted gene 2862 [Source:MGI Symbol;Acc:MGI:3781038]
50. Slc2a3 ENSMUSG00000003153 5785 0.709 - - - - - 0.709 solute carrier family 2 (facilitated glucose transporter), member 3 [Source:MGI Symbol;Acc:MGI:95757]
51. Hmmr ENSMUSG00000020330 2775 0.708 - - - - - 0.708 hyaluronan mediated motility receptor (RHAMM) [Source:MGI Symbol;Acc:MGI:104667]
52. Fam104a ENSMUSG00000041629 2898 0.708 - - - - - 0.708 family with sequence similarity 104, member A [Source:MGI Symbol;Acc:MGI:106351]
53. Spire2 ENSMUSG00000010154 178 0.707 - 0.707 - - - - spire type actin nucleation factor 2 [Source:MGI Symbol;Acc:MGI:2446256]
54. Usp16 ENSMUSG00000025616 1330 0.707 - - - - - 0.707 ubiquitin specific peptidase 16 [Source:MGI Symbol;Acc:MGI:1921362]
55. Gm15500 ENSMUSG00000086583 10556 0.706 - 0.706 - - - - predicted pseudogene 15500 [Source:MGI Symbol;Acc:MGI:3782947]
56. Hapln3 ENSMUSG00000030606 185 0.706 - 0.706 - - - - hyaluronan and proteoglycan link protein 3 [Source:MGI Symbol;Acc:MGI:1914916]
57. Rtn4r ENSMUSG00000043811, ENSMUSG00000111113 196 0.706 - 0.706 - - - - reticulon 4 receptor [Source:MGI Symbol;Acc:MGI:2136886]
58. Murc 198 0.706 - 0.706 - - - - muscle-related coiled-coil protein
59. Gm14165 ENSMUSG00000081434 180 0.706 - 0.706 - - - - predicted gene 14165 [Source:MGI Symbol;Acc:MGI:3650537]
60. Hcls1 ENSMUSG00000022831 213 0.706 - 0.706 - - - - hematopoietic cell specific Lyn substrate 1 [Source:MGI Symbol;Acc:MGI:104568]
61. AI429214 ENSMUSG00000074384 276 0.705 - 0.705 - - - - expressed sequence AI429214 [Source:MGI Symbol;Acc:MGI:2142538]
62. Immp2l ENSMUSG00000056899 263 0.704 - 0.704 - - - - IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2135611]
63. Upp1 ENSMUSG00000020407 279 0.704 - 0.704 - - - - uridine phosphorylase 1 [Source:MGI Symbol;Acc:MGI:1097668]
64. G6pdx ENSMUSG00000031400 2910 0.703 - - - - - 0.703 glucose-6-phosphate dehydrogenase X-linked [Source:MGI Symbol;Acc:MGI:105979]
65. Zfp568 ENSMUSG00000074221 6903 0.703 - 0.703 - - - - zinc finger protein 568 [Source:MGI Symbol;Acc:MGI:2142347]
66. Snx19 ENSMUSG00000031993 550 0.703 - 0.703 - - - - sorting nexin 19 [Source:MGI Symbol;Acc:MGI:1921581]
67. Ggh ENSMUSG00000073987 640 0.703 - - 0.703 - - - gamma-glutamyl hydrolase [Source:MGI Symbol;Acc:MGI:1329035]
68. Phyhipl ENSMUSG00000037747 636 0.703 - 0.703 - - - - phytanoyl-CoA hydroxylase interacting protein-like [Source:MGI Symbol;Acc:MGI:1918161]
69. Dnaaf2 ENSMUSG00000020973 1187 0.702 - - - 0.702 - - dynein, axonemal assembly factor 2 [Source:MGI Symbol;Acc:MGI:1923566]
70. Fam102a ENSMUSG00000039157 428 0.702 - 0.702 - - - - family with sequence similarity 102, member A [Source:MGI Symbol;Acc:MGI:2138935]
71. Noc2l ENSMUSG00000095567 594 0.702 - 0.702 - - - - NOC2 like nucleolar associated transcriptional repressor [Source:MGI Symbol;Acc:MGI:1931051]
72. Actg2 ENSMUSG00000059430 611 0.701 - 0.701 - - - - actin, gamma 2, smooth muscle, enteric [Source:MGI Symbol;Acc:MGI:104589]
73. 2700050L05Rik 2700050L05Rik 694 0.701 - 0.701 - - - -
74. Cep63 ENSMUSG00000032534 639 0.701 - 0.701 - - - - centrosomal protein 63 [Source:MGI Symbol;Acc:MGI:2158560]
75. Lfng ENSMUSG00000029570 386 0.701 - 0.701 - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:MGI Symbol;Acc:MGI:1095413]
76. Pnpla2 ENSMUSG00000025509 905 0.701 - - - 0.701 - - patatin-like phospholipase domain containing 2 [Source:MGI Symbol;Acc:MGI:1914103]
77. Acbd5 ENSMUSG00000026781 774 0.7 - 0.700 - - - - acyl-Coenzyme A binding domain containing 5 [Source:MGI Symbol;Acc:MGI:1921409]
78. Pak1ip1 ENSMUSG00000038683 5855 0.7 - - - - - 0.700 PAK1 interacting protein 1 [Source:MGI Symbol;Acc:MGI:1915333]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA