Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Pdf

Gene Name Gene ID Reads Annotation
Pdf ENSMUSG00000078931 80 peptide deformylase (mitochondrial) [Source:MGI Symbol;Acc:MGI:1915273]







Genes with expression patterns similar to Pdf

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Pdf ENSMUSG00000078931 80 6 1.000 1.000 1.000 1.000 1.000 1.000 peptide deformylase (mitochondrial) [Source:MGI Symbol;Acc:MGI:1915273]
2. Prima1 ENSMUSG00000041669 38 0.872 - - - - 0.872 - proline rich membrane anchor 1 [Source:MGI Symbol;Acc:MGI:1926097]
3. Gm11431 ENSMUSG00000087407 7 0.869 - - - - 0.869 - predicted gene 11431 [Source:MGI Symbol;Acc:MGI:3650047]
4. 2900093L17Rik 2900093L17Rik 19 0.866 - - - - 0.866 -
5. Gm10364 ENSMUSG00000072492 29 0.866 - - - - 0.866 - predicted pseudogene 10364 [Source:MGI Symbol;Acc:MGI:3643153]
6. 2210408I21Rik ENSMUSG00000071252 189 0.865 - - - - - 0.865 RIKEN cDNA 2210408I21 gene [Source:MGI Symbol;Acc:MGI:1919621]
7. Gm12128 ENSMUSG00000087388 11 0.865 - - - - 0.865 - predicted gene 12128 [Source:MGI Symbol;Acc:MGI:3651507]
8. Gnb3 ENSMUSG00000023439 26 0.865 - - - - 0.865 - guanine nucleotide binding protein (G protein), beta 3 [Source:MGI Symbol;Acc:MGI:95785]
9. Gabrr2 ENSMUSG00000023267 15 0.862 - - - - 0.862 - gamma-aminobutyric acid (GABA) C receptor, subunit rho 2 [Source:MGI Symbol;Acc:MGI:95626]
10. Gm13215 ENSMUSG00000081394 24 0.857 - - - - 0.857 - predicted gene 13215 [Source:MGI Symbol;Acc:MGI:3650813]
11. Gm17244 ENSMUSG00000102997 14 0.857 - - - - 0.857 - predicted gene, 17244 [Source:MGI Symbol;Acc:MGI:4936878]
12. Bcl3 ENSMUSG00000053175 27 0.856 - - - - 0.856 - B cell leukemia/lymphoma 3 [Source:MGI Symbol;Acc:MGI:88140]
13. Gm26901 ENSMUSG00000097797 31 0.853 - - - - 0.853 - predicted gene, 26901 [Source:MGI Symbol;Acc:MGI:5477395]
14. Fgd1 ENSMUSG00000025265 30 0.853 - - - - 0.853 - FYVE, RhoGEF and PH domain containing 1 [Source:MGI Symbol;Acc:MGI:104566]
15. Trim65 ENSMUSG00000054517 56 0.852 - - - - 0.852 - tripartite motif-containing 65 [Source:MGI Symbol;Acc:MGI:2442815]
16. Gm15545 ENSMUSG00000087138 252 0.852 - - 0.852 - - - predicted gene 15545 [Source:MGI Symbol;Acc:MGI:3782994]
17. Gm16938 ENSMUSG00000097749 62 0.847 - - - - 0.847 - predicted gene, 16938 [Source:MGI Symbol;Acc:MGI:4439862]
18. Gm15651 ENSMUSG00000089663 12 0.846 - - 0.846 - - - predicted gene 15651 [Source:MGI Symbol;Acc:MGI:3783095]
19. Slc39a5 ENSMUSG00000039878 18 0.843 - - 0.843 - - - solute carrier family 39 (metal ion transporter), member 5 [Source:MGI Symbol;Acc:MGI:1919336]
20. Grik4 ENSMUSG00000032017 67 0.843 - - - - 0.843 - glutamate receptor, ionotropic, kainate 4 [Source:MGI Symbol;Acc:MGI:95817]
21. Gm13965 ENSMUSG00000085508 24 0.842 - - - - 0.842 - predicted gene 13965 [Source:MGI Symbol;Acc:MGI:3650828]
22. Mir326 ENSMUSG00000065571 32 0.84 - - - - 0.840 - microRNA 326 [Source:MGI Symbol;Acc:MGI:3619338]
23. Gm13166 ENSMUSG00000085525, ENSMUSG00000116487 110 0.839 - - - - 0.839 - predicted gene 13166 [Source:MGI Symbol;Acc:MGI:3705130]
24. Gpr161 ENSMUSG00000040836 49 0.839 - - - - 0.839 - G protein-coupled receptor 161 [Source:MGI Symbol;Acc:MGI:2685054]
25. Cd46 ENSMUSG00000016493 37 0.837 - - - - 0.837 - CD46 antigen, complement regulatory protein [Source:MGI Symbol;Acc:MGI:1203290]
26. Gm15910 ENSMUSG00000087480 47 0.837 - - - - 0.837 - predicted gene 15910 [Source:MGI Symbol;Acc:MGI:3802158]
27. Rem1 ENSMUSG00000000359 10 0.835 - - 0.835 - - - rad and gem related GTP binding protein 1 [Source:MGI Symbol;Acc:MGI:1097696]
28. Fbxl15 ENSMUSG00000025226 33 0.834 - - - - 0.834 - F-box and leucine-rich repeat protein 15 [Source:MGI Symbol;Acc:MGI:1915681]
29. Map7 ENSMUSG00000019996 135 0.833 - - - - 0.833 - microtubule-associated protein 7 [Source:MGI Symbol;Acc:MGI:1328328]
30. Lrfn2 ENSMUSG00000040490 24 0.833 - - - - 0.833 - leucine rich repeat and fibronectin type III domain containing 2 [Source:MGI Symbol;Acc:MGI:1917780]
31. Hbq1b ENSMUSG00000073063 63 0.833 - - - - 0.833 - hemoglobin, theta 1B [Source:MGI Symbol;Acc:MGI:3613460]
32. Gm15834 ENSMUSG00000085054 30 0.832 - - - - 0.832 - predicted gene 15834 [Source:MGI Symbol;Acc:MGI:3802168]
33. Pkhd1 ENSMUSG00000043760 14 0.83 - - 0.830 - - - polycystic kidney and hepatic disease 1 [Source:MGI Symbol;Acc:MGI:2155808]
34. Plek2 ENSMUSG00000021118 62 0.829 - - - - 0.829 - pleckstrin 2 [Source:MGI Symbol;Acc:MGI:1351466]
35. Tst ENSMUSG00000044986 3 0.825 - - 0.825 - - - thiosulfate sulfurtransferase, mitochondrial [Source:MGI Symbol;Acc:MGI:98852]
36. Gm7628 ENSMUSG00000025644 63 0.825 - - - - 0.825 - predicted gene 7628 [Source:MGI Symbol;Acc:MGI:3643956]
37. Parp9 ENSMUSG00000022906 53 0.824 - - - - 0.824 - poly (ADP-ribose) polymerase family, member 9 [Source:MGI Symbol;Acc:MGI:1933117]
38. Apol7d ENSMUSG00000073652 38 0.822 - - - - 0.822 - apolipoprotein L 7d [Source:MGI Symbol;Acc:MGI:3723449]
39. Cntn3 ENSMUSG00000030075 24 0.821 - - 0.821 - - - contactin 3 [Source:MGI Symbol;Acc:MGI:99534]
40. Gm15972 ENSMUSG00000086287 2 0.821 - - 0.821 - - - predicted gene 15972 [Source:MGI Symbol;Acc:MGI:3801965]
41. Slc7a3 ENSMUSG00000031297 48 0.82 - - - - 0.820 - solute carrier family 7 (cationic amino acid transporter, y+ system), member 3 [Source:MGI Symbol;Acc:MGI:1100521]
42. Gm15952 ENSMUSG00000085655 100 0.82 - - - - 0.820 - predicted gene 15952 [Source:MGI Symbol;Acc:MGI:3802149]
43. Ngb ENSMUSG00000021032 5 0.82 - - 0.820 - - - neuroglobin [Source:MGI Symbol;Acc:MGI:2151886]
44. Rab19 ENSMUSG00000029923 11 0.818 - - 0.818 - - - RAB19, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:103292]
45. Lmod3 ENSMUSG00000044086 57 0.818 - - - - 0.818 - leiomodin 3 (fetal) [Source:MGI Symbol;Acc:MGI:2444169]
46. Fam26e 14 0.816 - - 0.816 - - - family with sequence similarity 26, member E
47. Pcdhb14 ENSMUSG00000044043 14 0.815 - - - - - 0.815 protocadherin beta 14 [Source:MGI Symbol;Acc:MGI:2136749]
48. Hcls1 ENSMUSG00000022831 213 0.808 - - - - 0.808 - hematopoietic cell specific Lyn substrate 1 [Source:MGI Symbol;Acc:MGI:104568]
49. Il1f9 ENSMUSG00000044103 18 0.807 - - 0.807 - - - interleukin 1 family, member 9 [Source:MGI Symbol;Acc:MGI:2449929]
50. Usp43 ENSMUSG00000020905 44 0.806 - - - - 0.806 - ubiquitin specific peptidase 43 [Source:MGI Symbol;Acc:MGI:2444541]
51. Hspa1a ENSMUSG00000091971 39 0.806 - - - - 0.806 - heat shock protein 1A [Source:MGI Symbol;Acc:MGI:96244]
52. Asphd1 ENSMUSG00000046378 24 0.806 - - - - 0.806 - aspartate beta-hydroxylase domain containing 1 [Source:MGI Symbol;Acc:MGI:2685014]
53. Oit1 ENSMUSG00000021749 8 0.804 - - 0.804 - - - oncoprotein induced transcript 1 [Source:MGI Symbol;Acc:MGI:1201784]
54. Gm10286 ENSMUSG00000070111 5 0.803 - - 0.803 - - - predicted gene 10286 [Source:MGI Symbol;Acc:MGI:3642117]
55. Gm20432 ENSMUSG00000092181 6 0.802 - - 0.802 - - - predicted gene 20432 [Source:MGI Symbol;Acc:MGI:5141897]
56. Cntnap4 ENSMUSG00000031772 33 0.802 - - - - 0.802 - contactin associated protein-like 4 [Source:MGI Symbol;Acc:MGI:2183572]
57. Gm281 ENSMUSG00000084902 1 0.801 - - 0.801 - - - predicted gene 281 [Source:MGI Symbol;Acc:MGI:2685127]
58. Dsg1c ENSMUSG00000034774 1 0.801 - - 0.801 - - - desmoglein 1 gamma [Source:MGI Symbol;Acc:MGI:2664358]
59. Tmem140 ENSMUSG00000057137 10 0.801 - - 0.801 - - - transmembrane protein 140 [Source:MGI Symbol;Acc:MGI:1915737]
60. Apc-ps1 ENSMUSG00000083152 4 0.801 - - 0.801 - - - adenomatosis polyposis coli, pseudogene 1 [Source:MGI Symbol;Acc:MGI:1930261]
61. Plcb2 ENSMUSG00000040061 54 0.801 - - - - 0.801 - phospholipase C, beta 2 [Source:MGI Symbol;Acc:MGI:107465]
62. Gm14928 ENSMUSG00000082718 1 0.801 - - 0.801 - - - predicted gene 14928 [Source:MGI Symbol;Acc:MGI:3648477]
63. Gm26674 ENSMUSG00000097597 2 0.801 - - 0.801 - - - predicted gene, 26674 [Source:MGI Symbol;Acc:MGI:5477168]
64. Il25 ENSMUSG00000040770 3 0.801 - - 0.801 - - - interleukin 25 [Source:MGI Symbol;Acc:MGI:2155888]
65. Gm8893 ENSMUSG00000090555 1 0.801 - - 0.801 - - - predicted gene 8893 [Source:MGI Symbol;Acc:MGI:3779818]
66. Mei1 ENSMUSG00000068117 2 0.801 - - 0.801 - - - meiotic double-stranded break formation protein 1 [Source:MGI Symbol;Acc:MGI:3028590]
67. 9230106D20Rik ENSMUSG00000042940 2 0.801 - - 0.801 - - - RIKEN cDNA 9230106D20 gene [Source:MGI Symbol;Acc:MGI:3045371]
68. Catsper3 ENSMUSG00000021499 1 0.801 - - 0.801 - - - cation channel, sperm associated 3 [Source:MGI Symbol;Acc:MGI:1924106]
69. Prss43 ENSMUSG00000058398 18 0.801 - - 0.801 - - - protease, serine 43 [Source:MGI Symbol;Acc:MGI:2684822]
70. 1700125G22Rik ENSMUSG00000097584 1 0.801 - - 0.801 - - - RIKEN cDNA 1700125G22 gene [Source:MGI Symbol;Acc:MGI:1923907]
71. Gm4994 ENSMUSG00000082117 1 0.801 - - 0.801 - - - predicted gene 4994 [Source:MGI Symbol;Acc:MGI:3645787]
72. Fam187a ENSMUSG00000075510 5 0.801 - - 0.801 - - - family with sequence similarity 187, member A [Source:MGI Symbol;Acc:MGI:1914034]
73. Ush1g ENSMUSG00000045288 7 0.801 - - 0.801 - - - USH1 protein network component sans [Source:MGI Symbol;Acc:MGI:2450757]
74. Gm16348 ENSMUSG00000085445 5 0.801 - - 0.801 - - - predicted gene 16348 [Source:MGI Symbol;Acc:MGI:3840113]
75. Aldh1b1 ENSMUSG00000035561 147 0.798 - - - - 0.798 - aldehyde dehydrogenase 1 family, member B1 [Source:MGI Symbol;Acc:MGI:1919785]
76. 1700095J07Rik ENSMUSG00000084861 13 0.795 - - 0.795 - - - RIKEN cDNA 1700095J07 gene [Source:MGI Symbol;Acc:MGI:1920824]
77. Themis2 ENSMUSG00000037731 86 0.795 - - - - 0.795 - thymocyte selection associated family member 2 [Source:MGI Symbol;Acc:MGI:2446213]
78. Gm13453 ENSMUSG00000083240 2 0.792 - - 0.792 - - - predicted gene 13453 [Source:MGI Symbol;Acc:MGI:3651618]
79. Mab21l1 ENSMUSG00000056947 39 0.791 - - 0.791 - - - mab-21-like 1 (C. elegans) [Source:MGI Symbol;Acc:MGI:1333773]
80. Tmem254a ENSMUSG00000072676 1 0.791 - - 0.791 - - - transmembrane protein 254a [Source:MGI Symbol;Acc:MGI:1196450]
81. Dio3os ENSMUSG00000113581 22 0.791 - - 0.791 - - - deiodinase, iodothyronine type III, opposite strand [Source:MGI Symbol;Acc:MGI:2664395]
82. Klrb1f ENSMUSG00000030154 6 0.791 - - 0.791 - - - killer cell lectin-like receptor subfamily B member 1F [Source:MGI Symbol;Acc:MGI:2442965]
83. D030028A08Rik ENSMUSG00000078700 73 0.791 - - - - 0.791 - RIKEN cDNA D030028A08 gene [Source:MGI Symbol;Acc:MGI:2441931]
84. Ptk6 ENSMUSG00000038751 6 0.79 - - 0.790 - - - PTK6 protein tyrosine kinase 6 [Source:MGI Symbol;Acc:MGI:99683]
85. Gm5822 ENSMUSG00000089993 4 0.79 - - 0.790 - - - predicted gene 5822 [Source:MGI Symbol;Acc:MGI:3648836]
86. Zfp92 ENSMUSG00000031374 10 0.79 - - 0.790 - - - zinc finger protein 92 [Source:MGI Symbol;Acc:MGI:108094]
87. Gm25857 ENSMUSG00000064722 2 0.79 - - 0.790 - - - predicted gene, 25857 [Source:MGI Symbol;Acc:MGI:5455634]
88. Gm16078 Gm16078 2 0.789 - - 0.789 - - -
89. Dlgap2 ENSMUSG00000047495 40 0.789 - - 0.789 - - - DLG associated protein 2 [Source:MGI Symbol;Acc:MGI:2443181]
90. Gm15417 ENSMUSG00000074466 39 0.789 - - 0.789 - - - predicted gene 15417 [Source:MGI Symbol;Acc:MGI:3642531]
91. 4930444P10Rik ENSMUSG00000067795 20 0.789 - - 0.789 - - - RIKEN cDNA 4930444P10 gene [Source:MGI Symbol;Acc:MGI:1923049]
92. Fyb ENSMUSG00000022148 81 0.786 - - - - 0.786 - FYN binding protein [Source:MGI Symbol;Acc:MGI:1346327]
93. F13a1 ENSMUSG00000039109 59 0.785 - - - - 0.785 - coagulation factor XIII, A1 subunit [Source:MGI Symbol;Acc:MGI:1921395]
94. 2310014L17Rik 2310014L17Rik 153 0.782 - - - - 0.782 -
95. Hist2h2ac ENSMUSG00000068855 48 0.782 - - 0.782 - - - histone cluster 2, H2ac [Source:MGI Symbol;Acc:MGI:2448316]
96. Map6d1 ENSMUSG00000041205 24 0.781 - - 0.781 - - - MAP6 domain containing 1 [Source:MGI Symbol;Acc:MGI:3607784]
97. Elf3 ENSMUSG00000003051 195 0.781 - - 0.781 - - - E74-like factor 3 [Source:MGI Symbol;Acc:MGI:1101781]
98. Gm8186 ENSMUSG00000049124 361 0.78 - - - - 0.780 - predicted gene 8186 [Source:MGI Symbol;Acc:MGI:3643110]
99. Gm9835 Gm9835 15 0.779 - - 0.779 - - -
100. Trpv6 ENSMUSG00000029868 3 0.778 - - 0.778 - - - transient receptor potential cation channel, subfamily V, member 6 [Source:MGI Symbol;Acc:MGI:1927259]

There are 125 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA