Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Pde1a

Gene Name Gene ID Reads Annotation
Pde1a ENSMUSG00000059173 184 phosphodiesterase 1A, calmodulin-dependent [Source:MGI Symbol;Acc:MGI:1201792]







Genes with expression patterns similar to Pde1a

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Pde1a ENSMUSG00000059173 184 6 1.000 1.000 1.000 1.000 1.000 1.000 phosphodiesterase 1A, calmodulin-dependent [Source:MGI Symbol;Acc:MGI:1201792]
2. Mal ENSMUSG00000027375 39 1.751 0.791 - 0.960 - - - myelin and lymphocyte protein, T cell differentiation protein [Source:MGI Symbol;Acc:MGI:892970]
3. Gm25291 ENSMUSG00000084744 16 0.981 - - 0.981 - - - predicted gene, 25291 [Source:MGI Symbol;Acc:MGI:5455068]
4. Arfgap2 ENSMUSG00000027255 8 0.975 - - 0.975 - - - ADP-ribosylation factor GTPase activating protein 2 [Source:MGI Symbol;Acc:MGI:1924288]
5. Ccdc11 Ccdc11 17 0.972 - - 0.972 - - -
6. Gm22806 ENSMUSG00000064672 11 0.971 - - 0.971 - - - predicted gene, 22806 [Source:MGI Symbol;Acc:MGI:5452583]
7. Gm25348 ENSMUSG00000089586 11 0.971 - - 0.971 - - - predicted gene, 25348 [Source:MGI Symbol;Acc:MGI:5455125]
8. Gm10715 ENSMUSG00000096201 18 0.971 - - 0.971 - - - predicted gene 10715 [Source:MGI Symbol;Acc:MGI:3642376]
9. Tlr7 ENSMUSG00000044583 11 0.971 - - 0.971 - - - toll-like receptor 7 [Source:MGI Symbol;Acc:MGI:2176882]
10. Gm25933 ENSMUSG00000095876 6 0.971 - - 0.971 - - - predicted gene, 25933 [Source:MGI Symbol;Acc:MGI:5455710]
11. Abcg3 ENSMUSG00000029299 9 0.97 - - 0.970 - - - ATP binding cassette subfamily G member 3 [Source:MGI Symbol;Acc:MGI:1351624]
12. 5330439K02Rik ENSMUSG00000097827 13 0.968 - - 0.968 - - - RIKEN cDNA 5330439K02 gene [Source:MGI Symbol;Acc:MGI:1925532]
13. Aim1l 28 0.967 - - 0.967 - - - absent in melanoma 1-like, transcript variant X4
14. Gm26704 ENSMUSG00000097875, ENSMUSG00000116724 9 0.967 - - 0.967 - - - predicted gene, 26704 [Source:MGI Symbol;Acc:MGI:5477198]
15. Evi2a ENSMUSG00000078771 27 0.966 - - 0.966 - - - ecotropic viral integration site 2a [Source:MGI Symbol;Acc:MGI:95458]
16. Gm11630 ENSMUSG00000086917 9 0.966 - - 0.966 - - - predicted gene 11630 [Source:MGI Symbol;Acc:MGI:3650475]
17. Gm13961 ENSMUSG00000084094 26 0.965 - - 0.965 - - - predicted gene 13961 [Source:MGI Symbol;Acc:MGI:3650627]
18. Vps13c ENSMUSG00000035284 230 0.962 - - 0.962 - - - vacuolar protein sorting 13C [Source:MGI Symbol;Acc:MGI:2444207]
19. Gm5921 ENSMUSG00000074034 52 0.961 - - 0.961 - - - predicted gene 5921 [Source:MGI Symbol;Acc:MGI:3648968]
20. Mir1983 ENSMUSG00000088148 63 0.96 - - 0.960 - - - microRNA 1983 [Source:MGI Symbol;Acc:MGI:3837223]
21. Gm14138 ENSMUSG00000081572 36 0.959 - - 0.959 - - - predicted gene 14138 [Source:MGI Symbol;Acc:MGI:3649496]
22. Kcnd2 ENSMUSG00000060882 118 0.958 - - 0.958 - - - potassium voltage-gated channel, Shal-related family, member 2 [Source:MGI Symbol;Acc:MGI:102663]
23. Taco1 ENSMUSG00000001983 63 0.954 - - 0.954 - - - translational activator of mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:1917457]
24. Rasgrf2 ENSMUSG00000021708 16 0.953 - - 0.953 - - - RAS protein-specific guanine nucleotide-releasing factor 2 [Source:MGI Symbol;Acc:MGI:109137]
25. Zfp58 ENSMUSG00000071291 34 0.953 - - 0.953 - - - zinc finger protein 58 [Source:MGI Symbol;Acc:MGI:99205]
26. Tbx1 ENSMUSG00000009097 77 0.952 - - 0.952 - - - T-box 1 [Source:MGI Symbol;Acc:MGI:98493]
27. Znf41-ps ENSMUSG00000084350 36 0.951 - - 0.951 - - - ZNF41, pseudogene [Source:MGI Symbol;Acc:MGI:1917255]
28. Hoxa6 ENSMUSG00000043219 83 0.951 - - 0.951 - - - homeobox A6 [Source:MGI Symbol;Acc:MGI:96178]
29. Gm16283 ENSMUSG00000087020 28 0.95 - - 0.950 - - - predicted gene 16283 [Source:MGI Symbol;Acc:MGI:3826591]
30. Gm20696 ENSMUSG00000030068 92 0.944 - - 0.944 - - - predicted gene 20696 [Source:MGI Symbol;Acc:MGI:5313143]
31. Snx11 ENSMUSG00000020876 41 0.943 - - 0.943 - - - sorting nexin 11 [Source:MGI Symbol;Acc:MGI:1921729]
32. Zfp54 ENSMUSG00000023882 41 0.942 - - 0.942 - - - zinc finger protein 54 [Source:MGI Symbol;Acc:MGI:99201]
33. Apobec3 ENSMUSG00000009585 138 0.94 - - 0.940 - - - apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3 [Source:MGI Symbol;Acc:MGI:1933111]
34. Plcl1 ENSMUSG00000038349 34 0.939 - - 0.939 - - - phospholipase C-like 1 [Source:MGI Symbol;Acc:MGI:3036262]
35. 4930426D05Rik ENSMUSG00000043168 40 0.938 - - 0.938 - - - RIKEN cDNA 4930426D05 gene [Source:MGI Symbol;Acc:MGI:1921894]
36. Ampd3 ENSMUSG00000005686 113 0.933 - - 0.933 - - - adenosine monophosphate deaminase 3 [Source:MGI Symbol;Acc:MGI:1096344]
37. Gm3150 ENSMUSG00000096173 83 0.933 - - 0.933 - - - predicted gene 3150 [Source:MGI Symbol;Acc:MGI:3781329]
38. Lhfpl1 ENSMUSG00000041700 92 0.932 - - 0.932 - - - lipoma HMGIC fusion partner-like 1 [Source:MGI Symbol;Acc:MGI:1891214]
39. Ptar1 ENSMUSG00000074925 115 0.931 - - 0.931 - - - protein prenyltransferase alpha subunit repeat containing 1 [Source:MGI Symbol;Acc:MGI:1921875]
40. Fam35a 250 0.929 - - 0.929 - - - family with sequence similarity 35, member A, transcript variant X8
41. 2700081L22Rik 2700081L22Rik 44 0.929 - - 0.929 - - -
42. Prr16 ENSMUSG00000073565 31 0.928 - - 0.928 - - - proline rich 16 [Source:MGI Symbol;Acc:MGI:1918623]
43. Adrm1 ENSMUSG00000039041 219 0.928 - - 0.928 - - - adhesion regulating molecule 1 [Source:MGI Symbol;Acc:MGI:1929289]
44. Gm26734 ENSMUSG00000097460 45 0.926 - - 0.926 - - - predicted gene, 26734 [Source:MGI Symbol;Acc:MGI:5477228]
45. Clcnka ENSMUSG00000033770 16 0.926 - - 0.926 - - - chloride channel, voltage-sensitive Ka [Source:MGI Symbol;Acc:MGI:1329026]
46. 1700007K13Rik ENSMUSG00000026831 52 0.924 - - 0.924 - - - RIKEN cDNA 1700007K13 gene [Source:MGI Symbol;Acc:MGI:1916577]
47. Zfp551 ENSMUSG00000034071 101 0.923 - - 0.923 - - - zinc fingr protein 551 [Source:MGI Symbol;Acc:MGI:3588205]
48. Vwa5a ENSMUSG00000023186 304 0.921 - - 0.921 - - - von Willebrand factor A domain containing 5A [Source:MGI Symbol;Acc:MGI:1915026]
49. Gjb6 ENSMUSG00000040055 80 0.92 - - 0.920 - - - gap junction protein, beta 6 [Source:MGI Symbol;Acc:MGI:107588]
50. Crym ENSMUSG00000030905 71 0.92 - - 0.920 - - - crystallin, mu [Source:MGI Symbol;Acc:MGI:102675]
51. Gm4462 ENSMUSG00000090319 36 0.917 - - 0.917 - - - predicted gene 4462 [Source:MGI Symbol;Acc:MGI:3782646]
52. B130006D01Rik ENSMUSG00000075596 183 0.916 - - 0.916 - - - RIKEN cDNA B130006D01 gene [Source:MGI Symbol;Acc:MGI:2444371]
53. Gm6211 ENSMUSG00000091577 43 0.914 - - 0.914 - - - predicted gene 6211 [Source:MGI Symbol;Acc:MGI:3646534]
54. Rnf135 ENSMUSG00000020707 98 0.912 - - 0.912 - - - ring finger protein 135 [Source:MGI Symbol;Acc:MGI:1919206]
55. 2810433D01Rik ENSMUSG00000086283 23 0.912 - - 0.912 - - - RIKEN cDNA 2810433D01 gene [Source:MGI Symbol;Acc:MGI:1924382]
56. Fgf8 ENSMUSG00000025219 27 0.911 - - 0.911 - - - fibroblast growth factor 8 [Source:MGI Symbol;Acc:MGI:99604]
57. Snora68 ENSMUSG00000077563 99 0.91 - - 0.910 - - - small nucleolar RNA, H/ACA box 68 [Source:MGI Symbol;Acc:MGI:2148181]
58. Ccnb2-ps ENSMUSG00000083718 83 0.91 - - 0.910 - - - cyclin B2, pseudogene [Source:MGI Symbol;Acc:MGI:3779896]
59. Pcdh10 ENSMUSG00000049100 172 0.909 - - 0.909 - - - protocadherin 10 [Source:MGI Symbol;Acc:MGI:1338042]
60. Rapgef5 ENSMUSG00000041992 56 0.908 - - 0.908 - - - Rap guanine nucleotide exchange factor (GEF) 5 [Source:MGI Symbol;Acc:MGI:2444365]
61. A730017L22Rik ENSMUSG00000085566 146 0.907 - - 0.907 - - - RIKEN cDNA A730017L22 gene [Source:MGI Symbol;Acc:MGI:3584452]
62. Fau ENSMUSG00000038274 25 0.906 - - 0.906 - - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived) [Source:MGI Symbol;Acc:MGI:102547]
63. Tle6 ENSMUSG00000034758 116 0.904 - - 0.904 - - - transducin-like enhancer of split 6 [Source:MGI Symbol;Acc:MGI:2149593]
64. Pex12 ENSMUSG00000018733 304 0.901 - - 0.901 - - - peroxisomal biogenesis factor 12 [Source:MGI Symbol;Acc:MGI:2144177]
65. Casp3 ENSMUSG00000031628 475 0.898 - - 0.898 - - - caspase 3 [Source:MGI Symbol;Acc:MGI:107739]
66. Aatk ENSMUSG00000025375 43 0.897 - - 0.897 - - - apoptosis-associated tyrosine kinase [Source:MGI Symbol;Acc:MGI:1197518]
67. Rad23a ENSMUSG00000003813 128 0.895 - - 0.895 - - - RAD23 homolog A, nucleotide excision repair protein [Source:MGI Symbol;Acc:MGI:105126]
68. Gm5258 ENSMUSG00000091806 123 0.893 - - 0.893 - - - predicted gene 5258 [Source:MGI Symbol;Acc:MGI:3647794]
69. Fstl4 ENSMUSG00000036264 74 0.892 - - 0.892 - - - follistatin-like 4 [Source:MGI Symbol;Acc:MGI:2443199]
70. Stxbp3a Stxbp3a 493 0.891 - - 0.891 - - -
71. Tapbpl ENSMUSG00000038213 246 0.887 - - 0.887 - - - TAP binding protein-like [Source:MGI Symbol;Acc:MGI:2384853]
72. Nipal1 ENSMUSG00000067219 50 0.886 - - 0.886 - - - NIPA-like domain containing 1 [Source:MGI Symbol;Acc:MGI:1917951]
73. Cystm1 ENSMUSG00000046727 199 0.883 - - 0.883 - - - cysteine-rich transmembrane module containing 1 [Source:MGI Symbol;Acc:MGI:1913310]
74. Gm12942 332 0.882 - - 0.882 - - - predicted gene 12942
75. Dnase2a ENSMUSG00000003812 117 0.882 - - 0.882 - - - deoxyribonuclease II alpha [Source:MGI Symbol;Acc:MGI:1329019]
76. Oprm1 ENSMUSG00000000766 292 0.877 - - 0.877 - - - opioid receptor, mu 1 [Source:MGI Symbol;Acc:MGI:97441]
77. Naif1 ENSMUSG00000039164 151 0.876 - - 0.876 - - - nuclear apoptosis inducing factor 1 [Source:MGI Symbol;Acc:MGI:1918504]
78. Gm13139 312 0.875 - - 0.875 - - - predicted gene 13139
79. Gm5121 ENSMUSG00000066626 235 0.872 - - 0.872 - - - predicted gene 5121 [Source:MGI Symbol;Acc:MGI:3647258]
80. Ctf2 ENSMUSG00000060034 240 0.871 - - 0.871 - - - cardiotrophin 2 [Source:MGI Symbol;Acc:MGI:2684607]
81. Slco3a1 ENSMUSG00000025790 755 0.867 - - 0.867 - - - solute carrier organic anion transporter family, member 3a1 [Source:MGI Symbol;Acc:MGI:1351867]
82. Dgkk ENSMUSG00000062393, ENSMUSG00000116051 264 0.866 - - 0.866 - - - diacylglycerol kinase kappa [Source:MGI Symbol;Acc:MGI:3580254]
83. 1700030K09Rik ENSMUSG00000052794 252 0.858 - - 0.858 - - - RIKEN cDNA 1700030K09 gene [Source:MGI Symbol;Acc:MGI:1919504]
84. C3 ENSMUSG00000024164 24 0.856 0.856 - - - - - complement component 3 [Source:MGI Symbol;Acc:MGI:88227]
85. BB218582 ENSMUSG00000085218 128 0.855 - - 0.855 - - - expressed sequence BB218582 [Source:MGI Symbol;Acc:MGI:2139448]
86. Yes1 ENSMUSG00000014932 364 0.853 - - 0.853 - - - YES proto-oncogene 1, Src family tyrosine kinase [Source:MGI Symbol;Acc:MGI:99147]
87. Hid1 ENSMUSG00000034586 131 0.851 - - 0.851 - - - HID1 domain containing [Source:MGI Symbol;Acc:MGI:2445087]
88. Faxc ENSMUSG00000028246 115 0.849 - - 0.849 - - - failed axon connections homolog [Source:MGI Symbol;Acc:MGI:1923382]
89. Gm20716 ENSMUSG00000093752 3044 0.849 - - 0.849 - - - predicted gene 20716 [Source:MGI Symbol;Acc:MGI:5313163]
90. Glt1d1 ENSMUSG00000049971 48 0.846 - - 0.846 - - - glycosyltransferase 1 domain containing 1 [Source:MGI Symbol;Acc:MGI:2442755]
91. 2310002L09Rik ENSMUSG00000028396 135 0.846 - - 0.846 - - - RIKEN cDNA 2310002L09 gene [Source:MGI Symbol;Acc:MGI:1916780]
92. 2210015D19Rik 2210015D19Rik 1089 0.845 - - 0.845 - - -
93. Zfc3h1 ENSMUSG00000034163 1104 0.843 - - 0.843 - - - zinc finger, C3H1-type containing [Source:MGI Symbol;Acc:MGI:2446143]
94. Gin1 ENSMUSG00000026333 428 0.841 - - 0.841 - - - gypsy retrotransposon integrase 1 [Source:MGI Symbol;Acc:MGI:2182036]
95. Gpt ENSMUSG00000022546 145 0.841 - - 0.841 - - - glutamic pyruvic transaminase, soluble [Source:MGI Symbol;Acc:MGI:95802]
96. Hlcs ENSMUSG00000040820 526 0.838 - - 0.838 - - - holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) [Source:MGI Symbol;Acc:MGI:894646]
97. Fam188b 233 0.838 - - 0.838 - - - family with sequence similarity 188, member B, transcript variant X5
98. Rspo2 ENSMUSG00000051920 204 0.837 - - 0.837 - - - R-spondin 2 [Source:MGI Symbol;Acc:MGI:1922667]
99. Gm7658 ENSMUSG00000082935 223 0.832 - - 0.832 - - - predicted gene 7658 [Source:MGI Symbol;Acc:MGI:3648029]
100. Spata6 ENSMUSG00000034401 624 0.83 - - 0.830 - - - spermatogenesis associated 6 [Source:MGI Symbol;Acc:MGI:1915196]

There are 185 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA