Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Pax9

Gene Name Gene ID Reads Annotation
Pax9 ENSMUSG00000001497 255 paired box 9 [Source:MGI Symbol;Acc:MGI:97493]







Genes with expression patterns similar to Pax9

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Pax9 ENSMUSG00000001497 255 6 1.000 1.000 1.000 1.000 1.000 1.000 paired box 9 [Source:MGI Symbol;Acc:MGI:97493]
2. Pax1 ENSMUSG00000037034 2297 4.343 0.894 0.889 0.932 0.756 - 0.872 paired box 1 [Source:MGI Symbol;Acc:MGI:97485]
3. Uncx ENSMUSG00000029546 4593 3.795 0.714 0.762 0.811 0.715 - 0.793 UNC homeobox [Source:MGI Symbol;Acc:MGI:108013]
4. AI646519 ENSMUSG00000087521 162 3.003 0.781 0.789 - 0.718 - 0.715 expressed sequence AI646519 [Source:MGI Symbol;Acc:MGI:2139024]
5. Shh ENSMUSG00000002633 468 2.439 0.749 0.836 0.854 - - - sonic hedgehog [Source:MGI Symbol;Acc:MGI:98297]
6. C1qtnf3 ENSMUSG00000058914 1227 2.326 0.778 - 0.831 - - 0.717 C1q and tumor necrosis factor related protein 3 [Source:MGI Symbol;Acc:MGI:1932136]
7. Meox1 ENSMUSG00000001493 3105 2.323 0.871 - 0.741 - - 0.711 mesenchyme homeobox 1 [Source:MGI Symbol;Acc:MGI:103220]
8. Col2a1 ENSMUSG00000022483 6073 2.257 0.707 - 0.765 - - 0.785 collagen, type II, alpha 1 [Source:MGI Symbol;Acc:MGI:88452]
9. Foxd1 ENSMUSG00000078302 2176 2.23 0.748 0.777 - - - 0.705 forkhead box D1 [Source:MGI Symbol;Acc:MGI:1347463]
10. Tcf15 ENSMUSG00000068079 1156 2.187 0.759 0.711 0.717 - - - transcription factor 15 [Source:MGI Symbol;Acc:MGI:104664]
11. Pcp4 ENSMUSG00000090223 384 1.619 - 0.843 0.776 - - - Purkinje cell protein 4 [Source:MGI Symbol;Acc:MGI:97509]
12. Myh3 ENSMUSG00000020908 1729 1.544 0.733 - 0.811 - - - myosin, heavy polypeptide 3, skeletal muscle, embryonic [Source:MGI Symbol;Acc:MGI:1339709]
13. Ttn ENSMUSG00000051747 3015 1.543 0.813 - 0.730 - - - titin [Source:MGI Symbol;Acc:MGI:98864]
14. Ntn1 ENSMUSG00000020902 1175 1.532 0.718 0.814 - - - - netrin 1 [Source:MGI Symbol;Acc:MGI:105088]
15. Spon1 ENSMUSG00000038156 1709 1.514 - 0.757 0.757 - - - spondin 1, (f-spondin) extracellular matrix protein [Source:MGI Symbol;Acc:MGI:2385287]
16. Dmrt2 ENSMUSG00000048138 949 1.495 0.786 - - - - 0.709 doublesex and mab-3 related transcription factor 2 [Source:MGI Symbol;Acc:MGI:1330307]
17. Arx ENSMUSG00000035277 216 1.493 - 0.757 0.736 - - - aristaless related homeobox [Source:MGI Symbol;Acc:MGI:1097716]
18. Mstn ENSMUSG00000026100 212 0.861 - - 0.861 - - - myostatin [Source:MGI Symbol;Acc:MGI:95691]
19. Apobec2 ENSMUSG00000040694, ENSMUSG00000116086 86 0.847 0.847 - - - - - apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2 [Source:MGI Symbol;Acc:MGI:1343178]
20. Nkx3-1 ENSMUSG00000022061 43 0.843 - - 0.843 - - - NK3 homeobox 1 [Source:MGI Symbol;Acc:MGI:97352]
21. Tnnt2 ENSMUSG00000026414 1982 0.832 - - 0.832 - - - troponin T2, cardiac [Source:MGI Symbol;Acc:MGI:104597]
22. Acan ENSMUSG00000030607 13 0.829 - - 0.829 - - - aggrecan [Source:MGI Symbol;Acc:MGI:99602]
23. Xirp1 ENSMUSG00000079243 19 0.817 - - 0.817 - - - xin actin-binding repeat containing 1 [Source:MGI Symbol;Acc:MGI:1333878]
24. Nkd2 ENSMUSG00000021567 1510 0.8 - - 0.800 - - - naked cuticle 2 [Source:MGI Symbol;Acc:MGI:1919543]
25. Srpk3 ENSMUSG00000002007 163 0.788 - - 0.788 - - - serine/arginine-rich protein specific kinase 3 [Source:MGI Symbol;Acc:MGI:1891338]
26. Myoz2 ENSMUSG00000028116 63 0.782 - - 0.782 - - - myozenin 2 [Source:MGI Symbol;Acc:MGI:1913063]
27. Gpr123 Gpr123 55 0.781 - - 0.781 - - -
28. Cbr2 ENSMUSG00000025150 318 0.781 - 0.781 - - - - carbonyl reductase 2 [Source:MGI Symbol;Acc:MGI:107200]
29. Gm14541 ENSMUSG00000084265 6 0.772 - - 0.772 - - - predicted gene 14541 [Source:MGI Symbol;Acc:MGI:3709642]
30. Gm26792 ENSMUSG00000096996 3 0.772 - - 0.772 - - - predicted gene, 26792 [Source:MGI Symbol;Acc:MGI:5477286]
31. A930003A15Rik ENSMUSG00000075330 10 0.772 - - 0.772 - - - RIKEN cDNA A930003A15 gene [Source:MGI Symbol;Acc:MGI:1915412]
32. Icosl ENSMUSG00000000732 44 0.771 - - 0.771 - - - icos ligand [Source:MGI Symbol;Acc:MGI:1354701]
33. Myh7 ENSMUSG00000053093 156 0.763 - - 0.763 - - - myosin, heavy polypeptide 7, cardiac muscle, beta [Source:MGI Symbol;Acc:MGI:2155600]
34. Unc45b ENSMUSG00000018845 221 0.762 - - 0.762 - - - unc-45 myosin chaperone B [Source:MGI Symbol;Acc:MGI:2443377]
35. Tnnc2 ENSMUSG00000017300 2196 0.762 0.762 - - - - - troponin C2, fast [Source:MGI Symbol;Acc:MGI:98780]
36. Foxc1 ENSMUSG00000050295 5789 0.761 - - - - - 0.761 forkhead box C1 [Source:MGI Symbol;Acc:MGI:1347466]
37. Acta1 ENSMUSG00000031972 1386 0.758 - - 0.758 - - - actin, alpha 1, skeletal muscle [Source:MGI Symbol;Acc:MGI:87902]
38. Foxa2 ENSMUSG00000037025 154 0.757 - 0.757 - - - - forkhead box A2 [Source:MGI Symbol;Acc:MGI:1347476]
39. Jag2 ENSMUSG00000002799 43 0.754 - - 0.754 - - - jagged 2 [Source:MGI Symbol;Acc:MGI:1098270]
40. Ache ENSMUSG00000023328 165 0.751 - - 0.751 - - - acetylcholinesterase [Source:MGI Symbol;Acc:MGI:87876]
41. Casq2 ENSMUSG00000027861 587 0.75 - - 0.750 - - - calsequestrin 2 [Source:MGI Symbol;Acc:MGI:1309469]
42. Sim1 ENSMUSG00000019913 382 0.749 0.749 - - - - - single-minded family bHLH transcription factor 1 [Source:MGI Symbol;Acc:MGI:98306]
43. Fibin ENSMUSG00000074971 907 0.747 0.747 - - - - - fin bud initiation factor homolog (zebrafish) [Source:MGI Symbol;Acc:MGI:1914856]
44. Gm12459 ENSMUSG00000083153 32 0.746 0.746 - - - - - predicted gene 12459 [Source:MGI Symbol;Acc:MGI:3651071]
45. Gm24924 ENSMUSG00000094306 8 0.73 - - 0.730 - - - predicted gene, 24924 [Source:MGI Symbol;Acc:MGI:5454701]
46. Edar ENSMUSG00000003227 5 0.73 - - 0.730 - - - ectodysplasin-A receptor [Source:MGI Symbol;Acc:MGI:1343498]
47. Zfp474 ENSMUSG00000046886 1 0.73 - - 0.730 - - - zinc finger protein 474 [Source:MGI Symbol;Acc:MGI:1914008]
48. Gm24489 Gm24489 8 0.73 - - 0.730 - - -
49. Vtn ENSMUSG00000017344 397 0.728 - 0.728 - - - - vitronectin [Source:MGI Symbol;Acc:MGI:98940]
50. Ebf1 ENSMUSG00000057098 3112 0.718 0.718 - - - - - early B cell factor 1 [Source:MGI Symbol;Acc:MGI:95275]
51. Ablim3 ENSMUSG00000032735 497 0.718 - - 0.718 - - - actin binding LIM protein family, member 3 [Source:MGI Symbol;Acc:MGI:2442582]
52. Pappa2 ENSMUSG00000073530 104 0.716 - - 0.716 - - - pappalysin 2 [Source:MGI Symbol;Acc:MGI:3051647]
53. Lmod3 ENSMUSG00000044086 57 0.714 - - 0.714 - - - leiomodin 3 (fetal) [Source:MGI Symbol;Acc:MGI:2444169]
54. Gm5127 ENSMUSG00000073010 12 0.713 - - 0.713 - - - predicted gene 5127 [Source:MGI Symbol;Acc:MGI:3648285]
55. Fap ENSMUSG00000000392 275 0.705 0.705 - - - - - fibroblast activation protein [Source:MGI Symbol;Acc:MGI:109608]
56. Islr ENSMUSG00000037206 338 0.705 0.705 - - - - - immunoglobulin superfamily containing leucine-rich repeat [Source:MGI Symbol;Acc:MGI:1349645]
57. Synpo2l ENSMUSG00000039376 565 0.703 - - 0.703 - - - synaptopodin 2-like [Source:MGI Symbol;Acc:MGI:1916010]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA