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Results for Pax6

Gene Name Gene ID Reads Annotation
Pax6 ENSMUSG00000027168 2751 paired box 6 [Source:MGI Symbol;Acc:MGI:97490]







Genes with expression patterns similar to Pax6

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Pax6 ENSMUSG00000027168 2751 6 1.000 1.000 1.000 1.000 1.000 1.000 paired box 6 [Source:MGI Symbol;Acc:MGI:97490]
2. Sox2 ENSMUSG00000074637 8409 3.143 0.827 - 0.802 0.723 0.791 - SRY (sex determining region Y)-box 2 [Source:MGI Symbol;Acc:MGI:98364]
3. Nhlh1 ENSMUSG00000051251 2017 3.112 0.730 - - 0.888 0.754 0.740 nescient helix loop helix 1 [Source:MGI Symbol;Acc:MGI:98481]
4. Neurod1 ENSMUSG00000034701 1390 3.024 0.745 - 0.703 0.846 0.730 - neurogenic differentiation 1 [Source:MGI Symbol;Acc:MGI:1339708]
5. Pou3f3 ENSMUSG00000045515 5137 2.931 - - 0.734 0.713 0.717 0.767 POU domain, class 3, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102564]
6. Nhlh2 ENSMUSG00000048540 1310 2.449 - - 0.774 0.789 0.886 - nescient helix loop helix 2 [Source:MGI Symbol;Acc:MGI:97324]
7. RP24-312G4.2 RP24-312G4.2 350 2.444 0.783 - - 0.881 0.780 -
8. Nrarp ENSMUSG00000078202 1708 2.441 0.828 - - 0.774 0.839 - Notch-regulated ankyrin repeat protein [Source:MGI Symbol;Acc:MGI:1914372]
9. 2610017I09Rik 2610017I09Rik 1595 2.423 0.801 - - 0.728 0.894 -
10. Scube2 ENSMUSG00000007279 406 2.371 0.862 - 0.734 0.775 - - signal peptide, CUB domain, EGF-like 2 [Source:MGI Symbol;Acc:MGI:1928765]
11. Hes5 ENSMUSG00000048001 1640 2.331 0.818 - 0.784 0.729 - - hes family bHLH transcription factor 5 [Source:MGI Symbol;Acc:MGI:104876]
12. Pou3f2 ENSMUSG00000095139 2416 2.329 0.818 - 0.794 0.717 - - POU domain, class 3, transcription factor 2 [Source:MGI Symbol;Acc:MGI:101895]
13. Tmsb4x ENSMUSG00000049775 61014 2.306 - - 0.713 0.781 0.812 - thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
14. Miat ENSMUSG00000097767 4258 2.304 0.788 - - 0.734 - 0.782 myocardial infarction associated transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444886]
15. Apba2 ENSMUSG00000030519 840 2.296 0.728 - 0.740 - 0.828 - amyloid beta (A4) precursor protein-binding, family A, member 2 [Source:MGI Symbol;Acc:MGI:1261791]
16. Trim2 ENSMUSG00000027993 3587 2.291 0.751 - - 0.788 0.752 - tripartite motif-containing 2 [Source:MGI Symbol;Acc:MGI:1933163]
17. Tubb3 ENSMUSG00000062380 9211 2.281 - - 0.703 0.795 0.783 - tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
18. Ppp1r17 ENSMUSG00000002930 374 2.243 0.730 - 0.732 0.781 - - protein phosphatase 1, regulatory subunit 17 [Source:MGI Symbol;Acc:MGI:1333876]
19. Phf21b ENSMUSG00000016624 849 2.208 0.730 - - 0.744 - 0.734 PHD finger protein 21B [Source:MGI Symbol;Acc:MGI:2443812]
20. Map1b ENSMUSG00000052727 28977 1.738 - 0.971 - 0.767 - - microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
21. Gm3764 ENSMUSG00000097156 474 1.701 - - - - 0.905 0.796 predicted gene 3764 [Source:MGI Symbol;Acc:MGI:3781938]
22. Gpr98 Gpr98 1797 1.629 0.902 - - 0.727 - -
23. Sox3 ENSMUSG00000045179 1137 1.623 0.861 - 0.762 - - - SRY (sex determining region Y)-box 3 [Source:MGI Symbol;Acc:MGI:98365]
24. Neurog1 ENSMUSG00000048904 327 1.618 0.804 - - 0.814 - - neurogenin 1 [Source:MGI Symbol;Acc:MGI:107754]
25. Cntn2 ENSMUSG00000053024 1798 1.612 - - - 0.786 - 0.826 contactin 2 [Source:MGI Symbol;Acc:MGI:104518]
26. Elavl4 ENSMUSG00000028546 6084 1.578 - - - 0.798 0.780 - ELAV like RNA binding protein 4 [Source:MGI Symbol;Acc:MGI:107427]
27. Sst ENSMUSG00000004366 517 1.554 0.735 - - 0.819 - - somatostatin [Source:MGI Symbol;Acc:MGI:98326]
28. Trp53i11 ENSMUSG00000068735 15944 1.528 0.719 - - 0.809 - - transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
29. Tubb2b ENSMUSG00000045136 41060 1.527 - - - 0.755 0.772 - tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
30. Soga3 ENSMUSG00000038916 3972 1.525 - - - 0.723 0.802 - SOGA family member 3 [Source:MGI Symbol;Acc:MGI:1914662]
31. Srgap3 ENSMUSG00000030257 2941 1.524 0.817 - - 0.707 - - SLIT-ROBO Rho GTPase activating protein 3 [Source:MGI Symbol;Acc:MGI:2152938]
32. Pdpn ENSMUSG00000028583, ENSMUSG00000096951 1719 1.524 - - 0.735 - - 0.789 podoplanin [Source:MGI Symbol;Acc:MGI:103098]
33. Zic1 ENSMUSG00000032368 7734 1.51 - - 0.721 - - 0.789 zinc finger protein of the cerebellum 1 [Source:MGI Symbol;Acc:MGI:106683]
34. Ebf1 ENSMUSG00000057098 3112 1.509 - - - 0.779 0.730 - early B cell factor 1 [Source:MGI Symbol;Acc:MGI:95275]
35. Tuba1a ENSMUSG00000072235 51129 1.506 - - - 0.763 0.743 - tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
36. Dner ENSMUSG00000036766 209 1.505 - - - 0.702 0.803 - delta/notch-like EGF repeat containing [Source:MGI Symbol;Acc:MGI:2152889]
37. Chrna3 ENSMUSG00000032303 294 1.505 0.790 - 0.715 - - - cholinergic receptor, nicotinic, alpha polypeptide 3 [Source:MGI Symbol;Acc:MGI:87887]
38. Hoxb9 ENSMUSG00000020875 2764 1.503 0.701 - 0.802 - - - homeobox B9 [Source:MGI Symbol;Acc:MGI:96190]
39. Spock2 ENSMUSG00000058297 1096 1.502 0.786 - - - 0.716 - sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 [Source:MGI Symbol;Acc:MGI:1891351]
40. Zic3 ENSMUSG00000067860 549 1.501 0.773 - - 0.728 - - zinc finger protein of the cerebellum 3 [Source:MGI Symbol;Acc:MGI:106676]
41. Pgpep1 ENSMUSG00000056204 2455 1.499 0.701 - - 0.798 - - pyroglutamyl-peptidase I [Source:MGI Symbol;Acc:MGI:1913772]
42. Phyhipl ENSMUSG00000037747 636 1.495 - - - 0.725 0.770 - phytanoyl-CoA hydroxylase interacting protein-like [Source:MGI Symbol;Acc:MGI:1918161]
43. Prmt8 ENSMUSG00000030350 342 1.489 - - - 0.788 0.701 - protein arginine N-methyltransferase 8 [Source:MGI Symbol;Acc:MGI:3043083]
44. C130071C03Rik ENSMUSG00000050334 1582 1.485 0.746 - 0.739 - - - RIKEN cDNA C130071C03 gene [Source:MGI Symbol;Acc:MGI:2443574]
45. Ckb ENSMUSG00000001270 8443 1.484 0.784 - - 0.700 - - creatine kinase, brain [Source:MGI Symbol;Acc:MGI:88407]
46. Rhbdl3 ENSMUSG00000017692 783 1.473 - - - 0.722 0.751 - rhomboid like 3 [Source:MGI Symbol;Acc:MGI:2179276]
47. Hoxc6 ENSMUSG00000001661 9818 1.466 - - - - 0.762 0.704 homeobox C6 [Source:MGI Symbol;Acc:MGI:96197]
48. Pcdh8 ENSMUSG00000036422 452 1.443 0.741 - - - 0.702 - protocadherin 8 [Source:MGI Symbol;Acc:MGI:1306800]
49. Rgs4 ENSMUSG00000038530 539 1.439 - - 0.723 0.716 - - regulator of G-protein signaling 4 [Source:MGI Symbol;Acc:MGI:108409]
50. Btg2 ENSMUSG00000020423 1222 1.438 - - - 0.728 0.710 - B cell translocation gene 2, anti-proliferative [Source:MGI Symbol;Acc:MGI:108384]
51. Enc1 ENSMUSG00000041773 2185 1.435 - - - 0.726 0.709 - ectodermal-neural cortex 1 [Source:MGI Symbol;Acc:MGI:109610]
52. Wnt7b ENSMUSG00000022382 367 1.435 - - - 0.721 0.714 - wingless-type MMTV integration site family, member 7B [Source:MGI Symbol;Acc:MGI:98962]
53. Fez1 ENSMUSG00000032118 2537 1.434 - - - 0.717 0.717 - fasciculation and elongation protein zeta 1 (zygin I) [Source:MGI Symbol;Acc:MGI:2670976]
54. Tagln3 ENSMUSG00000022658 6054 1.43 - - - 0.716 0.714 - transgelin 3 [Source:MGI Symbol;Acc:MGI:1926784]
55. Ednrb ENSMUSG00000022122 1909 1.429 - - - 0.715 - 0.714 endothelin receptor type B [Source:MGI Symbol;Acc:MGI:102720]
56. Elavl3 ENSMUSG00000003410 2830 1.413 - - - 0.712 0.701 - ELAV like RNA binding protein 3 [Source:MGI Symbol;Acc:MGI:109157]
57. Rfc4 ENSMUSG00000022881 1797 0.999 - 0.999 - - - - replication factor C (activator 1) 4 [Source:MGI Symbol;Acc:MGI:2146571]
58. Nufip2 ENSMUSG00000037857 4757 0.999 - 0.999 - - - - nuclear fragile X mental retardation protein interacting protein 2 [Source:MGI Symbol;Acc:MGI:1915814]
59. Ssbp2 ENSMUSG00000003992 5516 0.999 - 0.999 - - - - single-stranded DNA binding protein 2 [Source:MGI Symbol;Acc:MGI:1914220]
60. Jpx ENSMUSG00000097571 1606 0.999 - 0.999 - - - - Jpx transcript, Xist activator (non-protein coding) [Source:MGI Symbol;Acc:MGI:2180008]
61. Metap1 ENSMUSG00000005813 5209 0.999 - 0.999 - - - - methionyl aminopeptidase 1 [Source:MGI Symbol;Acc:MGI:1922874]
62. Fhl2 ENSMUSG00000008136 2073 0.999 - 0.999 - - - - four and a half LIM domains 2 [Source:MGI Symbol;Acc:MGI:1338762]
63. Poc1b ENSMUSG00000019952 3527 0.999 - 0.999 - - - - POC1 centriolar protein B [Source:MGI Symbol;Acc:MGI:1918511]
64. Mtfr1l ENSMUSG00000046671 3218 0.999 - 0.999 - - - - mitochondrial fission regulator 1-like [Source:MGI Symbol;Acc:MGI:1924074]
65. B9d2 ENSMUSG00000063439 1774 0.999 - 0.999 - - - - B9 protein domain 2 [Source:MGI Symbol;Acc:MGI:2387643]
66. Mbd4 ENSMUSG00000030322 3686 0.999 - 0.999 - - - - methyl-CpG binding domain protein 4 [Source:MGI Symbol;Acc:MGI:1333850]
67. Nus1 ENSMUSG00000023068 4291 0.999 - 0.999 - - - - NUS1 dehydrodolichyl diphosphate synthase subunit [Source:MGI Symbol;Acc:MGI:1196365]
68. RP24-570C10.6 RP24-570C10.6 1922 0.999 - 0.999 - - - -
69. Oxsr1 ENSMUSG00000036737 2902 0.999 - 0.999 - - - - oxidative-stress responsive 1 [Source:MGI Symbol;Acc:MGI:1917378]
70. Qk ENSMUSG00000062078 10985 0.999 - 0.999 - - - - quaking [Source:MGI Symbol;Acc:MGI:97837]
71. Ddx54 ENSMUSG00000029599 3371 0.999 - 0.999 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Source:MGI Symbol;Acc:MGI:1919240]
72. Sf3b2 ENSMUSG00000024853 10455 0.998 - 0.998 - - - - splicing factor 3b, subunit 2 [Source:MGI Symbol;Acc:MGI:2441856]
73. Ptdss1 ENSMUSG00000021518 4429 0.998 - 0.998 - - - - phosphatidylserine synthase 1 [Source:MGI Symbol;Acc:MGI:1276575]
74. Zyg11b ENSMUSG00000034636 4618 0.998 - 0.998 - - - - zyg-ll family member B, cell cycle regulator [Source:MGI Symbol;Acc:MGI:2685277]
75. Klhdc10 ENSMUSG00000029775 6240 0.998 - 0.998 - - - - kelch domain containing 10 [Source:MGI Symbol;Acc:MGI:1924038]
76. Kif22 ENSMUSG00000030677 4914 0.997 - 0.997 - - - - kinesin family member 22 [Source:MGI Symbol;Acc:MGI:109233]
77. Psma2 ENSMUSG00000015671 11365 0.996 - 0.996 - - - - proteasome (prosome, macropain) subunit, alpha type 2 [Source:MGI Symbol;Acc:MGI:104885]
78. Bre 3054 0.996 - 0.996 - - - - brain and reproductive organ-expressed protein, transcript variant X1
79. Meis2 ENSMUSG00000027210 12084 0.996 - 0.996 - - - - Meis homeobox 2 [Source:MGI Symbol;Acc:MGI:108564]
80. Smarcc2 ENSMUSG00000025369 11776 0.995 - 0.995 - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 [Source:MGI Symbol;Acc:MGI:1915344]
81. Tnpo1 ENSMUSG00000009470 10504 0.994 - 0.994 - - - - transportin 1 [Source:MGI Symbol;Acc:MGI:2681523]
82. Igf2r ENSMUSG00000023830 12577 0.994 - 0.994 - - - - insulin-like growth factor 2 receptor [Source:MGI Symbol;Acc:MGI:96435]
83. Kif5b ENSMUSG00000006740 15165 0.994 - 0.994 - - - - kinesin family member 5B [Source:MGI Symbol;Acc:MGI:1098268]
84. Sec31a ENSMUSG00000035325 20178 0.991 - 0.991 - - - - Sec31 homolog A (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1916412]
85. Hax1 ENSMUSG00000027944 7599 0.988 - 0.988 - - - - HCLS1 associated X-1 [Source:MGI Symbol;Acc:MGI:1346319]
86. Snap47 ENSMUSG00000009894 8699 0.983 - 0.983 - - - - synaptosomal-associated protein, 47 [Source:MGI Symbol;Acc:MGI:1915076]
87. Gm8738 ENSMUSG00000092540 9001 0.98 - 0.980 - - - - predicted gene 8738 [Source:MGI Symbol;Acc:MGI:3644778]
88. Hmgn1 ENSMUSG00000040681 55060 0.976 - 0.976 - - - - high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
89. Lman1 ENSMUSG00000041891 6635 0.974 - 0.974 - - - - lectin, mannose-binding, 1 [Source:MGI Symbol;Acc:MGI:1917611]
90. Rps5 ENSMUSG00000012848 49542 0.955 - 0.955 - - - - ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
91. Rps4x ENSMUSG00000031320 60937 0.943 - 0.943 - - - - ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
92. Hba-x ENSMUSG00000055609 87325 0.931 - 0.931 - - - - hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
93. Tecr ENSMUSG00000031708 37176 0.925 - 0.925 - - - - trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
94. Rpl23 ENSMUSG00000071415 83209 0.898 - 0.898 - - - - ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
95. Trim28 ENSMUSG00000005566 48788 0.896 - 0.896 - - - - tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
96. Prdm12 ENSMUSG00000079466 202 0.865 0.865 - - - - - PR domain containing 12 [Source:MGI Symbol;Acc:MGI:2685844]
97. Foxb1 ENSMUSG00000059246 293 0.859 0.859 - - - - - forkhead box B1 [Source:MGI Symbol;Acc:MGI:1927549]
98. Ildr2 ENSMUSG00000040612 1142 0.837 0.837 - - - - - immunoglobulin-like domain containing receptor 2 [Source:MGI Symbol;Acc:MGI:1196370]
99. Fam181b ENSMUSG00000051515 734 0.831 0.831 - - - - - family with sequence similarity 181, member B [Source:MGI Symbol;Acc:MGI:1930951]
100. St18 ENSMUSG00000033740 408 0.821 - - - - 0.821 - suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]

There are 83 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA