Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Pax1

Gene Name Gene ID Reads Annotation
Pax1 ENSMUSG00000037034 2297 paired box 1 [Source:MGI Symbol;Acc:MGI:97485]







Genes with expression patterns similar to Pax1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Pax1 ENSMUSG00000037034 2297 6 1.000 1.000 1.000 1.000 1.000 1.000 paired box 1 [Source:MGI Symbol;Acc:MGI:97485]
2. C1qtnf3 ENSMUSG00000058914 1227 4.652 0.844 0.774 0.814 0.717 0.780 0.723 C1q and tumor necrosis factor related protein 3 [Source:MGI Symbol;Acc:MGI:1932136]
3. Pax9 ENSMUSG00000001497 255 4.343 0.894 0.889 0.932 0.756 - 0.872 paired box 9 [Source:MGI Symbol;Acc:MGI:97493]
4. Col2a1 ENSMUSG00000022483 6073 3.942 - 0.701 0.782 0.820 0.770 0.869 collagen, type II, alpha 1 [Source:MGI Symbol;Acc:MGI:88452]
5. Uncx ENSMUSG00000029546 4593 3.891 - 0.829 0.781 0.810 0.707 0.764 UNC homeobox [Source:MGI Symbol;Acc:MGI:108013]
6. Meox1 ENSMUSG00000001493 3105 3.846 0.777 - 0.800 0.702 0.836 0.731 mesenchyme homeobox 1 [Source:MGI Symbol;Acc:MGI:103220]
7. Dmrt2 ENSMUSG00000048138 949 3.111 0.847 0.748 - 0.729 - 0.787 doublesex and mab-3 related transcription factor 2 [Source:MGI Symbol;Acc:MGI:1330307]
8. AI646519 ENSMUSG00000087521 162 3.024 0.745 0.808 - 0.731 - 0.740 expressed sequence AI646519 [Source:MGI Symbol;Acc:MGI:2139024]
9. Myh3 ENSMUSG00000020908 1729 2.428 0.794 0.782 0.852 - - - myosin, heavy polypeptide 3, skeletal muscle, embryonic [Source:MGI Symbol;Acc:MGI:1339709]
10. Tcf15 ENSMUSG00000068079 1156 2.356 0.774 0.825 0.757 - - - transcription factor 15 [Source:MGI Symbol;Acc:MGI:104664]
11. Ntn1 ENSMUSG00000020902 1175 2.352 0.815 0.791 - - 0.746 - netrin 1 [Source:MGI Symbol;Acc:MGI:105088]
12. Col9a1 ENSMUSG00000026147 4752 2.248 - - - 0.750 0.737 0.761 collagen, type IX, alpha 1 [Source:MGI Symbol;Acc:MGI:88465]
13. Shh ENSMUSG00000002633 468 1.617 - 0.758 0.859 - - - sonic hedgehog [Source:MGI Symbol;Acc:MGI:98297]
14. Tnnt2 ENSMUSG00000026414 1982 1.589 - 0.714 0.875 - - - troponin T2, cardiac [Source:MGI Symbol;Acc:MGI:104597]
15. Ttn ENSMUSG00000051747 3015 1.569 0.811 - 0.758 - - - titin [Source:MGI Symbol;Acc:MGI:98864]
16. Spon1 ENSMUSG00000038156 1709 1.565 - 0.789 0.776 - - - spondin 1, (f-spondin) extracellular matrix protein [Source:MGI Symbol;Acc:MGI:2385287]
17. Acan ENSMUSG00000030607 13 1.529 - - 0.805 - 0.724 - aggrecan [Source:MGI Symbol;Acc:MGI:99602]
18. Foxc1 ENSMUSG00000050295 5789 1.522 - - - - 0.768 0.754 forkhead box C1 [Source:MGI Symbol;Acc:MGI:1347466]
19. Pcp4 ENSMUSG00000090223 384 1.52 - 0.768 0.752 - - - Purkinje cell protein 4 [Source:MGI Symbol;Acc:MGI:97509]
20. Ablim3 ENSMUSG00000032735 497 1.512 0.747 - 0.765 - - - actin binding LIM protein family, member 3 [Source:MGI Symbol;Acc:MGI:2442582]
21. Wnt16 ENSMUSG00000029671 196 1.495 0.757 0.738 - - - - wingless-type MMTV integration site family, member 16 [Source:MGI Symbol;Acc:MGI:2136018]
22. Casq2 ENSMUSG00000027861 587 1.445 - 0.717 0.728 - - - calsequestrin 2 [Source:MGI Symbol;Acc:MGI:1309469]
23. Prss34 ENSMUSG00000056399 33 0.863 - - - - 0.863 - protease, serine 34 [Source:MGI Symbol;Acc:MGI:2681414]
24. Foxd1 ENSMUSG00000078302 2176 0.842 - 0.842 - - - - forkhead box D1 [Source:MGI Symbol;Acc:MGI:1347463]
25. Irx1 ENSMUSG00000060969 545 0.815 - - - - 0.815 - Iroquois homeobox 1 [Source:MGI Symbol;Acc:MGI:1197515]
26. Acta1 ENSMUSG00000031972 1386 0.807 - - 0.807 - - - actin, alpha 1, skeletal muscle [Source:MGI Symbol;Acc:MGI:87902]
27. Irx2 ENSMUSG00000001504 819 0.803 - - - - 0.803 - Iroquois homeobox 2 [Source:MGI Symbol;Acc:MGI:1197526]
28. Foxa2 ENSMUSG00000037025 154 0.799 0.799 - - - - - forkhead box A2 [Source:MGI Symbol;Acc:MGI:1347476]
29. Nkx2-2 ENSMUSG00000027434 69 0.791 0.791 - - - - - NK2 homeobox 2 [Source:MGI Symbol;Acc:MGI:97347]
30. Tnnc2 ENSMUSG00000017300 2196 0.783 0.783 - - - - - troponin C2, fast [Source:MGI Symbol;Acc:MGI:98780]
31. Myoz2 ENSMUSG00000028116 63 0.776 - - 0.776 - - - myozenin 2 [Source:MGI Symbol;Acc:MGI:1913063]
32. Plod2 ENSMUSG00000032374 2682 0.774 - - - 0.774 - - procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:MGI Symbol;Acc:MGI:1347007]
33. Mstn ENSMUSG00000026100 212 0.774 - - 0.774 - - - myostatin [Source:MGI Symbol;Acc:MGI:95691]
34. Cbr2 ENSMUSG00000025150 318 0.774 - 0.774 - - - - carbonyl reductase 2 [Source:MGI Symbol;Acc:MGI:107200]
35. Cd36 ENSMUSG00000002944 142 0.762 0.762 - - - - - CD36 molecule [Source:MGI Symbol;Acc:MGI:107899]
36. Sim1 ENSMUSG00000019913 382 0.758 0.758 - - - - - single-minded family bHLH transcription factor 1 [Source:MGI Symbol;Acc:MGI:98306]
37. Srpk3 ENSMUSG00000002007 163 0.757 - - 0.757 - - - serine/arginine-rich protein specific kinase 3 [Source:MGI Symbol;Acc:MGI:1891338]
38. Mylpf ENSMUSG00000030672 5024 0.751 0.751 - - - - - myosin light chain, phosphorylatable, fast skeletal muscle [Source:MGI Symbol;Acc:MGI:97273]
39. Nkd2 ENSMUSG00000021567 1510 0.749 - - 0.749 - - - naked cuticle 2 [Source:MGI Symbol;Acc:MGI:1919543]
40. Mgp ENSMUSG00000030218 88 0.749 - - - - 0.749 - matrix Gla protein [Source:MGI Symbol;Acc:MGI:96976]
41. Unc45b ENSMUSG00000018845 221 0.741 - - 0.741 - - - unc-45 myosin chaperone B [Source:MGI Symbol;Acc:MGI:2443377]
42. Tbx1 ENSMUSG00000009097 77 0.739 - - - - - 0.739 T-box 1 [Source:MGI Symbol;Acc:MGI:98493]
43. Nkx3-1 ENSMUSG00000022061 43 0.739 - - 0.739 - - - NK3 homeobox 1 [Source:MGI Symbol;Acc:MGI:97352]
44. Synpo2l ENSMUSG00000039376 565 0.737 - - 0.737 - - - synaptopodin 2-like [Source:MGI Symbol;Acc:MGI:1916010]
45. Neb ENSMUSG00000026950 948 0.732 0.732 - - - - - nebulin [Source:MGI Symbol;Acc:MGI:97292]
46. Tbx15 ENSMUSG00000027868 23 0.729 - - - - 0.729 - T-box 15 [Source:MGI Symbol;Acc:MGI:1277234]
47. Foxf2 ENSMUSG00000038402 667 0.727 0.727 - - - - - forkhead box F2 [Source:MGI Symbol;Acc:MGI:1347479]
48. Atp2a1 ENSMUSG00000030730 8 0.727 - - - - - 0.727 ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 [Source:MGI Symbol;Acc:MGI:105058]
49. Xirp1 ENSMUSG00000079243 19 0.72 - - 0.720 - - - xin actin-binding repeat containing 1 [Source:MGI Symbol;Acc:MGI:1333878]
50. Nkx2-9 ENSMUSG00000058669 17 0.72 0.720 - - - - - NK2 homeobox 9 [Source:MGI Symbol;Acc:MGI:1270158]
51. Ache ENSMUSG00000023328 165 0.72 - - 0.720 - - - acetylcholinesterase [Source:MGI Symbol;Acc:MGI:87876]
52. Scg2 ENSMUSG00000050711 91 0.719 0.719 - - - - - secretogranin II [Source:MGI Symbol;Acc:MGI:103033]
53. Hrk ENSMUSG00000046607 35 0.718 0.718 - - - - - harakiri, BCL2 interacting protein (contains only BH3 domain) [Source:MGI Symbol;Acc:MGI:1201608]
54. Gm11267 ENSMUSG00000084851 17 0.718 - - 0.718 - - - predicted gene 11267 [Source:MGI Symbol;Acc:MGI:3649847]
55. 2310002L09Rik ENSMUSG00000028396 135 0.715 - - - - - 0.715 RIKEN cDNA 2310002L09 gene [Source:MGI Symbol;Acc:MGI:1916780]
56. Myh7 ENSMUSG00000053093 156 0.715 - - 0.715 - - - myosin, heavy polypeptide 7, cardiac muscle, beta [Source:MGI Symbol;Acc:MGI:2155600]
57. Cdh15 ENSMUSG00000031962 318 0.712 - 0.712 - - - - cadherin 15 [Source:MGI Symbol;Acc:MGI:106672]
58. Myf5 ENSMUSG00000000435 593 0.707 0.707 - - - - - myogenic factor 5 [Source:MGI Symbol;Acc:MGI:97252]
59. Apobec2 ENSMUSG00000040694, ENSMUSG00000116086 86 0.707 0.707 - - - - - apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2 [Source:MGI Symbol;Acc:MGI:1343178]
60. Fap ENSMUSG00000000392 275 0.703 - 0.703 - - - - fibroblast activation protein [Source:MGI Symbol;Acc:MGI:109608]
61. Fgf4 ENSMUSG00000050917 68 0.702 - - 0.702 - - - fibroblast growth factor 4 [Source:MGI Symbol;Acc:MGI:95518]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA