Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Palb2

Gene Name Gene ID Reads Annotation
Palb2 ENSMUSG00000044702 600 partner and localizer of BRCA2 [Source:MGI Symbol;Acc:MGI:3040695]







Genes with expression patterns similar to Palb2

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Palb2 ENSMUSG00000044702 600 6 1.000 1.000 1.000 1.000 1.000 1.000 partner and localizer of BRCA2 [Source:MGI Symbol;Acc:MGI:3040695]
2. Timp1 ENSMUSG00000001131 780 0.83 - - - - - 0.830 tissue inhibitor of metalloproteinase 1 [Source:MGI Symbol;Acc:MGI:98752]
3. Gm15457 ENSMUSG00000087374 23 0.806 - - - - - 0.806 predicted gene 15457 [Source:MGI Symbol;Acc:MGI:3705190]
4. Gm16070 ENSMUSG00000085125 40 0.806 - - - - - 0.806 predicted gene 16070 [Source:MGI Symbol;Acc:MGI:3801761]
5. 6330416G13Rik 684 0.804 - - 0.804 - - - RIKEN cDNA 6330416G13 gene, transcript variant X5
6. Gm10822 ENSMUSG00000097377 9 0.803 - - - - - 0.803 predicted gene 10822 [Source:MGI Symbol;Acc:MGI:3641955]
7. Gm13648 ENSMUSG00000086549 21 0.803 - - - - - 0.803 predicted gene 13648 [Source:MGI Symbol;Acc:MGI:3652033]
8. Gm12368 ENSMUSG00000083934 7 0.803 - - - - - 0.803 predicted gene 12368 [Source:MGI Symbol;Acc:MGI:3649555]
9. Crb3 ENSMUSG00000044279 54 0.801 - - - - - 0.801 crumbs family member 3 [Source:MGI Symbol;Acc:MGI:2670904]
10. Srcrb4d Srcrb4d 20 0.798 - - - - - 0.798
11. Leprel1 Leprel1 49 0.793 - - - - - 0.793
12. 1700109H08Rik ENSMUSG00000008307 17 0.792 - - - - - 0.792 RIKEN cDNA 1700109H08 gene [Source:MGI Symbol;Acc:MGI:1924286]
13. 5330417C22Rik ENSMUSG00000040412 23 0.791 - - - - - 0.791 RIKEN cDNA 5330417C22 gene [Source:MGI Symbol;Acc:MGI:1923930]
14. Gm10166 Gm10166 15 0.79 - - - - - 0.790
15. 9130017K11Rik ENSMUSG00000055134 33 0.787 - - - - - 0.787 RIKEN cDNA 9130017K11 gene [Source:MGI Symbol;Acc:MGI:1926030]
16. Gm6169 ENSMUSG00000057762 16 0.786 - - - - - 0.786 predicted gene 6169 [Source:MGI Symbol;Acc:MGI:3646298]
17. C1ra ENSMUSG00000055172 76 0.783 - - - - - 0.783 complement component 1, r subcomponent A [Source:MGI Symbol;Acc:MGI:1355313]
18. Camkmt ENSMUSG00000071037 246 0.783 - - - - - 0.783 calmodulin-lysine N-methyltransferase [Source:MGI Symbol;Acc:MGI:1920832]
19. Il18 ENSMUSG00000039217 25 0.782 - - - - - 0.782 interleukin 18 [Source:MGI Symbol;Acc:MGI:107936]
20. Adra2a ENSMUSG00000033717 147 0.78 - - - - - 0.780 adrenergic receptor, alpha 2a [Source:MGI Symbol;Acc:MGI:87934]
21. Gm15613 ENSMUSG00000080753 37 0.78 - - - - - 0.780 predicted gene 15613 [Source:MGI Symbol;Acc:MGI:3783058]
22. Ankef1 ENSMUSG00000074771 14 0.777 0.777 - - - - - ankyrin repeat and EF-hand domain containing 1 [Source:MGI Symbol;Acc:MGI:2441685]
23. Pibf1 ENSMUSG00000022064 297 0.776 0.776 - - - - - progesterone immunomodulatory binding factor 1 [Source:MGI Symbol;Acc:MGI:1261910]
24. Prrx2 ENSMUSG00000039476 1259 0.776 - - - - - 0.776 paired related homeobox 2 [Source:MGI Symbol;Acc:MGI:98218]
25. Ripk2 ENSMUSG00000041135 299 0.776 - - - - - 0.776 receptor (TNFRSF)-interacting serine-threonine kinase 2 [Source:MGI Symbol;Acc:MGI:1891456]
26. Gm8773 ENSMUSG00000073234 31 0.774 - - - - - 0.774 predicted gene 8773 [Source:MGI Symbol;Acc:MGI:3646213]
27. Agpat9 43 0.773 0.773 - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 9, transcript variant X4
28. 1110054M08Rik 1110054M08Rik 99 0.773 0.773 - - - - -
29. Hist1h3g ENSMUSG00000099517 97 0.772 0.772 - - - - - histone cluster 1, H3g [Source:MGI Symbol;Acc:MGI:2145541]
30. Ccdc142 ENSMUSG00000107499 18 0.772 0.772 - - - - - coiled-coil domain containing 142 [Source:MGI Symbol;Acc:MGI:3045292]
31. C230014O12Rik ENSMUSG00000087461 17 0.772 - - - - - 0.772 RIKEN cDNA C230014O12 gene [Source:MGI Symbol;Acc:MGI:3045377]
32. 2010110K18Rik ENSMUSG00000097755 62 0.771 - - - - - 0.771 RIKEN cDNA 2010110K18 gene [Source:MGI Symbol;Acc:MGI:1922951]
33. Nup210l ENSMUSG00000027939 61 0.771 - - - - - 0.771 nucleoporin 210-like [Source:MGI Symbol;Acc:MGI:1924845]
34. Rep15 ENSMUSG00000040121 131 0.771 0.771 - - - - - RAB15 effector protein [Source:MGI Symbol;Acc:MGI:1913782]
35. P2ry14 ENSMUSG00000036381 17 0.771 - - - - - 0.771 purinergic receptor P2Y, G-protein coupled, 14 [Source:MGI Symbol;Acc:MGI:2155705]
36. Gm6472 ENSMUSG00000095597 22 0.769 0.769 - - - - - predicted pseudogene 6472 [Source:MGI Symbol;Acc:MGI:3648396]
37. Nkrf ENSMUSG00000044149 445 0.769 0.769 - - - - - NF-kappaB repressing factor [Source:MGI Symbol;Acc:MGI:1924536]
38. Gm22813 ENSMUSG00000105450, ENSMUSG00000105886 91 0.768 - - - - - 0.768 predicted gene, 22813 [Source:MGI Symbol;Acc:MGI:5452590]
39. Gm9999 ENSMUSG00000056509 10 0.767 - - - - - 0.767 predicted gene 9999 [Source:MGI Symbol;Acc:MGI:3642801]
40. Ccdc68 ENSMUSG00000038903 129 0.766 0.766 - - - - - coiled-coil domain containing 68 [Source:MGI Symbol;Acc:MGI:3612676]
41. Tmed8 ENSMUSG00000034111 381 0.766 - - - - - 0.766 transmembrane p24 trafficking protein 8 [Source:MGI Symbol;Acc:MGI:1923480]
42. Vmac ENSMUSG00000054723 731 0.766 - - 0.766 - - - vimentin-type intermediate filament associated coiled-coil protein [Source:MGI Symbol;Acc:MGI:2146912]
43. 1700001L05Rik ENSMUSG00000075511 15 0.764 - - - - - 0.764 RIKEN cDNA 1700001L05 gene [Source:MGI Symbol;Acc:MGI:1916541]
44. Gm14127 ENSMUSG00000082740 101 0.764 - - - - - 0.764 predicted gene 14127 [Source:MGI Symbol;Acc:MGI:3652004]
45. Gm17388 Gm17388 500 0.763 - - - - - 0.763
46. BC048403 ENSMUSG00000053684 84 0.763 - - - - - 0.763 cDNA sequence BC048403 [Source:MGI Symbol;Acc:MGI:2670984]
47. Pcdhb18 ENSMUSG00000048347 44 0.762 0.762 - - - - - protocadherin beta 18 [Source:MGI Symbol;Acc:MGI:2136756]
48. Gad2 ENSMUSG00000026787 118 0.761 0.761 - - - - - glutamic acid decarboxylase 2 [Source:MGI Symbol;Acc:MGI:95634]
49. Gm9516 ENSMUSG00000081280 11 0.761 0.761 - - - - - predicted gene 9516 [Source:MGI Symbol;Acc:MGI:3779926]
50. 4732465J04Rik ENSMUSG00000101517 8 0.761 0.761 - - - - - RIKEN cDNA 4732465J04 gene [Source:MGI Symbol;Acc:MGI:3041208]
51. Gm16292 Gm16292 40 0.761 0.761 - - - - -
52. Hsbp1l1 ENSMUSG00000078963 61 0.761 0.761 - - - - - heat shock factor binding protein 1-like 1 [Source:MGI Symbol;Acc:MGI:1913505]
53. Cox11 ENSMUSG00000020544 17 0.76 0.760 - - - - - cytochrome c oxidase assembly protein 11, copper chaperone [Source:MGI Symbol;Acc:MGI:1917052]
54. Ifi203 ENSMUSG00000039997 17 0.759 0.759 - - - - - interferon activated gene 203 [Source:MGI Symbol;Acc:MGI:96428]
55. Gm12097 ENSMUSG00000081887 11 0.759 0.759 - - - - - predicted gene 12097 [Source:MGI Symbol;Acc:MGI:3651582]
56. Mmp9 ENSMUSG00000017737 16 0.758 0.758 - - - - - matrix metallopeptidase 9 [Source:MGI Symbol;Acc:MGI:97011]
57. Gm6415 Gm6415 635 0.757 0.757 - - - - -
58. RNF8 RNF8 23 0.757 0.757 - - - - -
59. Gm11837 ENSMUSG00000086587 10 0.757 0.757 - - - - - predicted gene 11837 [Source:MGI Symbol;Acc:MGI:3702175]
60. Lrrc2 ENSMUSG00000032495 179 0.756 - - - - - 0.756 leucine rich repeat containing 2 [Source:MGI Symbol;Acc:MGI:1921499]
61. Eif2b2 ENSMUSG00000004788 1257 0.756 0.756 - - - - - eukaryotic translation initiation factor 2B, subunit 2 beta [Source:MGI Symbol;Acc:MGI:2145118]
62. 6330403A02Rik 6330403A02Rik 84 0.756 - - - - - 0.756
63. Rsl1 ENSMUSG00000058900 68 0.756 0.756 - - - - - regulator of sex limited protein 1 [Source:MGI Symbol;Acc:MGI:3044162]
64. Gm6043 ENSMUSG00000075245 56 0.755 0.755 - - - - - predicted gene 6043 [Source:MGI Symbol;Acc:MGI:3805955]
65. Sgcg ENSMUSG00000035296 66 0.755 0.755 - - - - - sarcoglycan, gamma (dystrophin-associated glycoprotein) [Source:MGI Symbol;Acc:MGI:1346524]
66. Cdc42bpg ENSMUSG00000024769, ENSMUSG00000107268 97 0.754 - - - - - 0.754 CDC42 binding protein kinase gamma (DMPK-like) [Source:MGI Symbol;Acc:MGI:2652845]
67. Ltc4s ENSMUSG00000020377 18 0.753 0.753 - - - - - leukotriene C4 synthase [Source:MGI Symbol;Acc:MGI:107498]
68. 3110021N24Rik ENSMUSG00000094958 110 0.752 - - - - - 0.752 RIKEN cDNA 3110021N24 gene [Source:MGI Symbol;Acc:MGI:1920383]
69. Zfp759 ENSMUSG00000057396 92 0.751 0.751 - - - - - zinc finger protein 759 [Source:MGI Symbol;Acc:MGI:2446280]
70. Gjb5 ENSMUSG00000042357 51 0.751 0.751 - - - - - gap junction protein, beta 5 [Source:MGI Symbol;Acc:MGI:95723]
71. Capn1 ENSMUSG00000024942 102 0.749 0.749 - - - - - calpain 1 [Source:MGI Symbol;Acc:MGI:88263]
72. Pgm3 ENSMUSG00000056131 59 0.749 - - - - - 0.749 phosphoglucomutase 3 [Source:MGI Symbol;Acc:MGI:97566]
73. Gm26891 ENSMUSG00000097455 8 0.747 0.747 - - - - - predicted gene, 26891 [Source:MGI Symbol;Acc:MGI:5477385]
74. Crem ENSMUSG00000063889 328 0.746 0.746 - - - - - cAMP responsive element modulator [Source:MGI Symbol;Acc:MGI:88495]
75. Ccdc146 ENSMUSG00000064280 65 0.745 - - - - - 0.745 coiled-coil domain containing 146 [Source:MGI Symbol;Acc:MGI:1922422]
76. Tm6sf2 ENSMUSG00000036151 39 0.744 0.744 - - - - - transmembrane 6 superfamily member 2 [Source:MGI Symbol;Acc:MGI:1933210]
77. Gcfc2 ENSMUSG00000035125 367 0.744 - - - - - 0.744 GC-rich sequence DNA binding factor 2 [Source:MGI Symbol;Acc:MGI:2141656]
78. Gm8618 ENSMUSG00000073559 115 0.744 0.744 - - - - - predicted gene 8618 [Source:MGI Symbol;Acc:MGI:3647540]
79. Gm25177 ENSMUSG00000084583 50 0.744 - - - - - 0.744 predicted gene, 25177 [Source:MGI Symbol;Acc:MGI:5454954]
80. Rpl30-ps3 ENSMUSG00000080873 111 0.743 0.743 - - - - - ribosomal protein L30, pseudogene 3 [Source:MGI Symbol;Acc:MGI:1321401]
81. P4htm ENSMUSG00000006675 104 0.743 - - - - - 0.743 prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) [Source:MGI Symbol;Acc:MGI:1921693]
82. Dock8 ENSMUSG00000052085 64 0.742 0.742 - - - - - dedicator of cytokinesis 8 [Source:MGI Symbol;Acc:MGI:1921396]
83. Gm26507 ENSMUSG00000097618 43 0.741 0.741 - - - - - predicted gene, 26507 [Source:MGI Symbol;Acc:MGI:5477001]
84. Dhps ENSMUSG00000060038 420 0.741 - - 0.741 - - - deoxyhypusine synthase [Source:MGI Symbol;Acc:MGI:2683592]
85. Hhip ENSMUSG00000064325 170 0.74 - - - - - 0.740 Hedgehog-interacting protein [Source:MGI Symbol;Acc:MGI:1341847]
86. Gfra2 ENSMUSG00000022103 94 0.739 0.739 - - - - - glial cell line derived neurotrophic factor family receptor alpha 2 [Source:MGI Symbol;Acc:MGI:1195462]
87. Tssk4 ENSMUSG00000007591 75 0.739 0.739 - - - - - testis-specific serine kinase 4 [Source:MGI Symbol;Acc:MGI:1918349]
88. Gm10307 ENSMUSG00000101093 159 0.739 - - 0.739 - - - predicted gene 10307 [Source:MGI Symbol;Acc:MGI:3642371]
89. Tom1l1 ENSMUSG00000020541 468 0.738 0.738 - - - - - target of myb1-like 1 (chicken) [Source:MGI Symbol;Acc:MGI:1919193]
90. Smim22 ENSMUSG00000096215 66 0.736 - - - - - 0.736 small integral membrane protein 22 [Source:MGI Symbol;Acc:MGI:3643379]
91. Cd46 ENSMUSG00000016493 37 0.736 0.736 - - - - - CD46 antigen, complement regulatory protein [Source:MGI Symbol;Acc:MGI:1203290]
92. Gabra1 ENSMUSG00000010803 177 0.736 - - - - - 0.736 gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1 [Source:MGI Symbol;Acc:MGI:95613]
93. Man1b1 ENSMUSG00000036646 1312 0.734 0.734 - - - - - mannosidase, alpha, class 1B, member 1 [Source:MGI Symbol;Acc:MGI:2684954]
94. Cldn3 ENSMUSG00000070473 65 0.734 0.734 - - - - - claudin 3 [Source:MGI Symbol;Acc:MGI:1329044]
95. Pygb ENSMUSG00000033059 1366 0.733 - - - - - 0.733 brain glycogen phosphorylase [Source:MGI Symbol;Acc:MGI:97828]
96. Ptgr2 ENSMUSG00000072946 410 0.733 - - - - - 0.733 prostaglandin reductase 2 [Source:MGI Symbol;Acc:MGI:1916372]
97. Apom ENSMUSG00000024391 200 0.73 - - - - - 0.730 apolipoprotein M [Source:MGI Symbol;Acc:MGI:1930124]
98. Cacna1g ENSMUSG00000020866 225 0.729 0.729 - - - - - calcium channel, voltage-dependent, T type, alpha 1G subunit [Source:MGI Symbol;Acc:MGI:1201678]
99. Wdr59 ENSMUSG00000031959 222 0.728 0.728 - - - - - WD repeat domain 59 [Source:MGI Symbol;Acc:MGI:2442115]
100. Tsku ENSMUSG00000049580 103 0.728 - - - - - 0.728 tsukushi, small leucine rich proteoglycan [Source:MGI Symbol;Acc:MGI:2443855]

There are 55 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA