Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Pabpc1

Gene Name Gene ID Reads Annotation
Pabpc1 ENSMUSG00000022283 50385 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]







Genes with expression patterns similar to Pabpc1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Pabpc1 ENSMUSG00000022283 50385 6 1.000 1.000 1.000 1.000 1.000 1.000 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
2. Arhgap5 ENSMUSG00000035133 1989 1.453 0.712 - 0.741 - - - Rho GTPase activating protein 5 [Source:MGI Symbol;Acc:MGI:1332637]
3. Rplp1 ENSMUSG00000007892 57321 0.826 0.826 - - - - - ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
4. Ube3a ENSMUSG00000025326 5067 0.823 - - 0.823 - - - ubiquitin protein ligase E3A [Source:MGI Symbol;Acc:MGI:105098]
5. Top1 ENSMUSG00000070544 27667 0.807 - - 0.807 - - - topoisomerase (DNA) I [Source:MGI Symbol;Acc:MGI:98788]
6. Prdx2 ENSMUSG00000005161 13464 0.795 0.795 - - - - - peroxiredoxin 2 [Source:MGI Symbol;Acc:MGI:109486]
7. Coro1c ENSMUSG00000004530 8028 0.79 0.790 - - - - - coronin, actin binding protein 1C [Source:MGI Symbol;Acc:MGI:1345964]
8. H2afy ENSMUSG00000015937 24294 0.785 - 0.785 - - - - H2A histone family, member Y [Source:MGI Symbol;Acc:MGI:1349392]
9. Pbrm1 ENSMUSG00000042323 25383 0.784 - - 0.784 - - - polybromo 1 [Source:MGI Symbol;Acc:MGI:1923998]
10. Zfhx4 ENSMUSG00000025255 6456 0.781 - - 0.781 - - - zinc finger homeodomain 4 [Source:MGI Symbol;Acc:MGI:2137668]
11. Csde1 ENSMUSG00000068823 18265 0.78 - - 0.780 - - - cold shock domain containing E1, RNA binding [Source:MGI Symbol;Acc:MGI:92356]
12. Ptp4a1 ENSMUSG00000026064, ENSMUSG00000117310 16237 0.779 - - 0.779 - - - protein tyrosine phosphatase 4a1 [Source:NCBI gene;Acc:19243]
13. Gm9846 Gm9846 21238 0.772 0.772 - - - - -
14. Smc6 ENSMUSG00000020608 5466 0.77 - - 0.770 - - - structural maintenance of chromosomes 6 [Source:MGI Symbol;Acc:MGI:1914491]
15. H2afv ENSMUSG00000041126 16296 0.768 0.768 - - - - - H2A histone family, member V [Source:MGI Symbol;Acc:MGI:1924855]
16. Gm11478 ENSMUSG00000083992 5384 0.756 0.756 - - - - - predicted gene 11478 [Source:MGI Symbol;Acc:MGI:3650888]
17. Matr3 ENSMUSG00000037236 11220 0.752 - - 0.752 - - - matrin 3 [Source:MGI Symbol;Acc:MGI:1298379]
18. Cfl1 ENSMUSG00000056201 106966 0.751 0.751 - - - - - cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
19. Dnaja2 ENSMUSG00000031701 16608 0.751 - - 0.751 - - - DnaJ heat shock protein family (Hsp40) member A2 [Source:MGI Symbol;Acc:MGI:1931882]
20. Oaz1 ENSMUSG00000035242 25670 0.748 - 0.748 - - - - ornithine decarboxylase antizyme 1 [Source:MGI Symbol;Acc:MGI:109433]
21. Ddx3x ENSMUSG00000000787 27968 0.747 - - 0.747 - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked [Source:MGI Symbol;Acc:MGI:103064]
22. Usp1 ENSMUSG00000028560 6559 0.746 0.746 - - - - - ubiquitin specific peptidase 1 [Source:MGI Symbol;Acc:MGI:2385198]
23. Foxp2 ENSMUSG00000029563 3505 0.746 - - 0.746 - - - forkhead box P2 [Source:MGI Symbol;Acc:MGI:2148705]
24. Yipf5 ENSMUSG00000024487 11380 0.741 - - 0.741 - - - Yip1 domain family, member 5 [Source:MGI Symbol;Acc:MGI:1914430]
25. Gm9769 12765 0.739 - 0.739 - - - - predicted pseudogene 9769
26. C1qbp ENSMUSG00000018446 17499 0.738 0.738 - - - - - complement component 1, q subcomponent binding protein [Source:MGI Symbol;Acc:MGI:1194505]
27. Ncl ENSMUSG00000026234 29206 0.73 - 0.730 - - - - nucleolin [Source:MGI Symbol;Acc:MGI:97286]
28. Srm ENSMUSG00000006442 7421 0.729 - 0.729 - - - - spermidine synthase [Source:MGI Symbol;Acc:MGI:102690]
29. Anp32b ENSMUSG00000028333 39524 0.727 0.727 - - - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
30. Zfp386 ENSMUSG00000042063 16828 0.723 - - 0.723 - - - zinc finger protein 386 (Kruppel-like) [Source:MGI Symbol;Acc:MGI:1930708]
31. Srsf1 ENSMUSG00000018379, ENSMUSG00000098301 13087 0.722 - - 0.722 - - - serine/arginine-rich splicing factor 1 [Source:MGI Symbol;Acc:MGI:98283]
32. Rock1 ENSMUSG00000024290 4094 0.721 - - 0.721 - - - Rho-associated coiled-coil containing protein kinase 1 [Source:MGI Symbol;Acc:MGI:107927]
33. Gnaq ENSMUSG00000024639 4432 0.721 0.721 - - - - - guanine nucleotide binding protein, alpha q polypeptide [Source:MGI Symbol;Acc:MGI:95776]
34. Kitl ENSMUSG00000019966 2254 0.713 0.713 - - - - - kit ligand [Source:MGI Symbol;Acc:MGI:96974]
35. Hnrnph1 ENSMUSG00000007850 31456 0.711 0.711 - - - - - heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
36. Gm12715 ENSMUSG00000059195 10137 0.709 - - 0.709 - - - predicted gene 12715 [Source:MGI Symbol;Acc:MGI:3650759]
37. Ftl1 ENSMUSG00000050708 13516 0.708 - 0.708 - - - - ferritin light polypeptide 1 [Source:MGI Symbol;Acc:MGI:95589]
38. Mtf2 ENSMUSG00000029267 8936 0.708 - - 0.708 - - - metal response element binding transcription factor 2 [Source:MGI Symbol;Acc:MGI:105050]
39. Nudcd2 ENSMUSG00000020328 7198 0.706 - - 0.706 - - - NudC domain containing 2 [Source:MGI Symbol;Acc:MGI:1277103]
40. Serp1 ENSMUSG00000027808 14116 0.704 - - 0.704 - - - stress-associated endoplasmic reticulum protein 1 [Source:MGI Symbol;Acc:MGI:92638]
41. Ccdc88a ENSMUSG00000032740 5218 0.704 - - 0.704 - - - coiled coil domain containing 88A [Source:MGI Symbol;Acc:MGI:1925177]
42. Sltm ENSMUSG00000032212 5014 0.702 0.702 - - - - - SAFB-like, transcription modulator [Source:MGI Symbol;Acc:MGI:1913910]
43. Ikzf5 ENSMUSG00000040167 2156 0.701 - - 0.701 - - - IKAROS family zinc finger 5 [Source:MGI Symbol;Acc:MGI:1914393]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA