Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PUM2

Gene Name Gene ID Reads Annotation
PUM2 ENSGALG00000016481 23625 pumilio RNA binding family member 2 [Source:NCBI gene;Acc:421961]











Genes with expression patterns similar to PUM2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PUM2 ENSGALG00000016481 23625 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pumilio RNA binding family member 2 [Source:NCBI gene;Acc:421961]
2. DYNC1LI1 ENSGALG00000011491 11011 1.771 - - - - 0.815 - - 0.956 - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
3. FOXK2 ENSGALG00000001577 6346 1.663 - - - - 0.795 - - 0.868 - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
4. YWHAH ENSGALG00000006743 29828 1.639 - - - - - - 0.774 0.865 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta [Source:NCBI gene;Acc:416955]
5. ATP2B4 ENSGALG00000003601 3746 1.609 - - 0.804 - - - 0.805 - - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
6. SOD2 ENSGALG00000011661 13178 1.609 - - 0.803 - 0.806 - - - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
7. PCMTD2 ENSGALG00000005901 1833 1.596 - - 0.734 - - - - 0.862 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
8. BCCIP ENSGALG00000006617 13291 1.595 - - 0.762 - 0.833 - - - - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
9. DECR1 ENSGALG00000036990 6360 1.594 - - 0.805 - 0.789 - - - - - 2,4-dienoyl-CoA reductase 1 [Source:HGNC Symbol;Acc:HGNC:2753]
10. S100A11 ENSGALG00000036711 23454 1.571 - - 0.785 - - - 0.786 - - - S100 calcium binding protein A11 [Source:NCBI gene;Acc:396075]
11. TXNDC12 ENSGALG00000010569 13822 1.571 - - 0.754 - - - - 0.817 - - thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
12. EIF3H ENSGALG00000040522 39919 1.57 - - 0.778 - - - 0.792 - - - eukaryotic translation initiation factor 3 subunit H [Source:NCBI gene;Acc:420288]
13. ASPM ENSGALG00000032398 12784 1.561 - - 0.745 - 0.816 - - - - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
14. C5H14ORF166 C5H14ORF166 24176 1.537 - - 0.749 - 0.788 - - - - -
15. HP1BP3 ENSGALG00000010079 33723 1.511 - - 0.742 - - - 0.769 - - - heterochromatin protein 1 binding protein 3 [Source:NCBI gene;Acc:425543]
16. SUCLG1 ENSGALG00000015961 14323 0.968 - - - - - - - 0.968 - - succinate-CoA ligase alpha subunit [Source:NCBI gene;Acc:422932]
17. POLR2H ENSGALG00000008534 21521 0.964 - - - - - - - 0.964 - - RNA polymerase II subunit H [Source:NCBI gene;Acc:424954]
18. DEK ENSGALG00000012684 14179 0.96 - - - - - - - 0.960 - - DEK proto-oncogene [Source:NCBI gene;Acc:420828]
19. XPR1 ENSGALG00000003893 5642 0.958 - - - - - - - 0.958 - - xenotropic and polytropic retrovirus receptor 1 [Source:HGNC Symbol;Acc:HGNC:12827]
20. UBE2B ENSGALG00000032664 6069 0.955 - - - - - - - 0.955 - - ubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]
21. PPP2R5D ENSGALG00000040005 6804 0.955 - - - - - - - 0.955 - - protein phosphatase 2 regulatory subunit B'delta [Source:HGNC Symbol;Acc:HGNC:9312]
22. C4orf46 ENSGALG00000009432 3255 0.955 - - - - - - - 0.955 - - chromosome 4 open reading frame 46 [Source:HGNC Symbol;Acc:HGNC:27320]
23. ACTN1 ENSGALG00000042458 10477 0.954 - - - - - - - 0.954 - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
24. PFDN2 ENSGALG00000026374 22020 0.954 - - - - - - - 0.954 - - prefoldin subunit 2 [Source:HGNC Symbol;Acc:HGNC:8867]
25. LUC7L2 ENSGALG00000036238 11817 0.953 - - - - - - - 0.953 - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
26. TBC1D1 ENSGALG00000039380 4423 0.952 - - - - - - - 0.952 - - TBC1 domain family member 1 [Source:NCBI gene;Acc:426162]
27. CMPK CMPK 9569 0.952 - - - - - - - 0.952 - -
28. TAB2 ENSGALG00000012356 3467 0.952 - - - - - - - 0.952 - - TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17075]
29. ZEB1 ENSGALG00000007260 9277 0.95 - - - - - - - 0.950 - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
30. EIF1AY ENSGALG00000016410 6431 0.95 - - - - - - - 0.950 - - eukaryotic translation initiation factor 1A, Y-linked [Source:NCBI gene;Acc:418606]
31. PES1 ENSGALG00000007778 12248 0.949 - - - - - - - 0.949 - - pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8848]
32. EMC7 ENSGALG00000009637 4969 0.948 - - - - - - - 0.948 - - ER membrane protein complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:24301]
33. SDHA ENSGALG00000013167 6509 0.947 - - - - - - - 0.947 - - succinate dehydrogenase complex flavoprotein subunit A [Source:NCBI gene;Acc:395758]
34. SOX9 ENSGALG00000004386 14802 0.945 - - - - - - - 0.945 - - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
35. SPINT1 ENSGALG00000008469 5735 0.945 - - - - - - - 0.945 - - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
36. WDR92 ENSGALG00000008760 3934 0.945 - - - - - - - 0.945 - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
37. WDR61 ENSGALG00000003221 11352 0.945 - - - - - - - 0.945 - - WD repeat domain 61 [Source:NCBI gene;Acc:415359]
38. SURF6 ENSGALG00000038413 11178 0.945 - - - - - - - 0.945 - - surfeit 6 [Source:NCBI gene;Acc:417160]
39. SHISA5 ENSGALG00000004661 8573 0.944 - - - - - - - 0.944 - - shisa family member 5 [Source:NCBI gene;Acc:415948]
40. ARPC5L ENSGALG00000001014 5642 0.944 - - - - - - - 0.944 - - actin related protein 2/3 complex subunit 5 like [Source:HGNC Symbol;Acc:HGNC:23366]
41. VPS39 ENSGALG00000008991 4018 0.943 - - - - - - - 0.943 - - VPS39, HOPS complex subunit [Source:NCBI gene;Acc:423230]
42. C28H19ORF10 C28H19ORF10 16529 0.942 - - - - - - - 0.942 - -
43. BCL2L1 ENSGALG00000006211 2490 0.942 - - - - - - - 0.942 - - BCL2 like 1 [Source:NCBI gene;Acc:373954]
44. CABIN1 ENSGALG00000006363 4415 0.941 - - - - - - - 0.941 - - calcineurin binding protein 1 [Source:HGNC Symbol;Acc:HGNC:24187]
45. IFT81 ENSGALG00000003854 2534 0.94 - - - - - - - 0.940 - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
46. ATOX1 ENSGALG00000004176 16486 0.939 - - - - - - - 0.939 - - antioxidant 1 copper chaperone [Source:NCBI gene;Acc:770231]
47. ELP3 ENSGALG00000016624 4483 0.938 - - - - - - - 0.938 - - elongator acetyltransferase complex subunit 3 [Source:NCBI gene;Acc:422021]
48. DCTN6 ENSGALG00000010298 7507 0.938 - - - - - - - 0.938 - - dynactin subunit 6 [Source:NCBI gene;Acc:771257]
49. MED1 ENSGALG00000001708 9556 0.938 - - - - - - - 0.938 - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
50. ANKRD49 ENSGALG00000017210 3247 0.937 - - - - - - - 0.937 - - ankyrin repeat domain 49 [Source:HGNC Symbol;Acc:HGNC:25970]
51. PDLIM1 ENSGALG00000005422 3385 0.937 - - - - - - - 0.937 - - PDZ and LIM domain 1 [Source:HGNC Symbol;Acc:HGNC:2067]
52. FZD6 ENSGALG00000030626 3336 0.937 - - - - - - - 0.937 - - frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
53. SMNDC1 ENSGALG00000008561 14415 0.937 - - - - - - - 0.937 - - survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16900]
54. NEK1 ENSGALG00000009683 4305 0.936 - - - - - - - 0.936 - - NIMA related kinase 1 [Source:HGNC Symbol;Acc:HGNC:7744]
55. FABP3 ENSGALG00000037050 873 0.936 - - - - - - - 0.936 - - fatty acid binding protein 3 [Source:NCBI gene;Acc:419557]
56. UQCC UQCC 5913 0.935 - - - - - - - 0.935 - -
57. PDS5B ENSGALG00000017070 3998 0.935 - - - - - - - 0.935 - - PDS5 cohesin associated factor B [Source:NCBI gene;Acc:418910]
58. SIAH1 ENSGALG00000003916 6682 0.935 - - - - - - 0.935 - - - siah E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:10857]
59. YTHDF2 ENSGALG00000034831 15118 0.935 - - - - - - 0.935 - - - YTH N6-methyladenosine RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:31675]
60. CHEK2 ENSGALG00000005695 1558 0.934 - - - - - - - 0.934 - - checkpoint kinase 2 [Source:NCBI gene;Acc:768913]
61. EFNB1 ENSGALG00000036539 2706 0.934 - - - - - - - 0.934 - - ephrin B1 [Source:NCBI gene;Acc:395896]
62. PDIA3 ENSGALG00000008348 4982 0.933 - - - - - - - 0.933 - - protein disulfide isomerase family A member 3 [Source:NCBI gene;Acc:373899]
63. FPGS ENSGALG00000042460 1749 0.932 - - - - - - - 0.932 - - folylpolyglutamate synthase [Source:HGNC Symbol;Acc:HGNC:3824]
64. HEXA ENSGALG00000043828 4789 0.932 - - - - - - - 0.932 - - hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
65. DUSP3 ENSGALG00000035369 1790 0.932 - - - - - - - 0.932 - - dual specificity phosphatase 3
66. C20ORF7 C20ORF7 2383 0.932 - - - - - - - 0.932 - -
67. XPOT ENSGALG00000009835 2953 0.931 - - - - - - - 0.931 - - exportin for tRNA [Source:NCBI gene;Acc:417824]
68. STXBP3 ENSGALG00000002001 1740 0.931 - - - - - - - 0.931 - - syntaxin binding protein 3 [Source:NCBI gene;Acc:424341]
69. GTF2H1 ENSGALG00000042340 1553 0.93 - - - - - - - 0.930 - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
70. PIK3C2B ENSGALG00000037043 4522 0.93 - - - - - - - 0.930 - - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:HGNC Symbol;Acc:HGNC:8972]
71. FAM69B ENSGALG00000002437 1253 0.929 - - - - - - - 0.929 - - family with sequence similarity 69 member B [Source:HGNC Symbol;Acc:HGNC:28290]
72. C12orf45 C12orf45 2445 0.929 - - - - - - - 0.929 - -
73. CRADD ENSGALG00000011297 1653 0.929 - - - - - - - 0.929 - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:NCBI gene;Acc:417900]
74. ERICH1 ENSGALG00000031021 1495 0.928 - - - - - - - 0.928 - - glutamate rich 1 [Source:NCBI gene;Acc:421904]
75. ACTR3 ENSGALG00000012159 16020 0.927 - - - - - - - 0.927 - - ARP3 actin related protein 3 homolog [Source:NCBI gene;Acc:374197]
76. ADAMTSL1 1479 0.926 - - - - - - - 0.926 - - ADAMTS like 1, transcript variant X3
77. ANKS1B ENSGALG00000011549 440 0.926 - - - - - - - 0.926 - - ankyrin repeat and sterile alpha motif domain containing 1B [Source:NCBI gene;Acc:417927]
78. ERAL1 ENSGALG00000003995 1114 0.926 - - - - - - - 0.926 - - Era like 12S mitochondrial rRNA chaperone 1 [Source:NCBI gene;Acc:374084]
79. PDE4B ENSGALG00000011094 1871 0.926 - - - - - - - 0.926 - - phosphodiesterase 4B [Source:NCBI gene;Acc:424700]
80. MAP9 ENSGALG00000020253 785 0.925 - - - - - - - 0.925 - - microtubule associated protein 9, transcript variant X7
81. CHP1 ENSGALG00000008569 6876 0.914 - - - - - - - 0.914 - - calcineurin like EF-hand protein 1 [Source:NCBI gene;Acc:423211]
82. CASK ENSGALG00000042400 8485 0.896 - - - - - - - 0.896 - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
83. KIF2A ENSGALG00000014737 16391 0.895 - - - - - - - 0.895 - - kinesin heavy chain member 2A [Source:NCBI gene;Acc:427156]
84. HLX ENSGALG00000037257 5834 0.895 - - - - - - - 0.895 - - H2.0 like homeobox [Source:HGNC Symbol;Acc:HGNC:4978]
85. TET1 ENSGALG00000031604 13002 0.889 - - - - - - - 0.889 - - tet methylcytosine dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:29484]
86. ASF1A ENSGALG00000014887 11319 0.888 - - - - - - - 0.888 - - anti-silencing function 1A histone chaperone [Source:NCBI gene;Acc:723780]
87. TBCA ENSGALG00000004353 18510 0.884 - - - - - - - 0.884 - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
88. ENSGALG00000014171 ENSGALG00000014171 10383 0.883 - - - - - - - 0.883 - -
89. MIPEP ENSGALG00000017118 8666 0.88 - - - - - - - 0.880 - - mitochondrial intermediate peptidase [Source:HGNC Symbol;Acc:HGNC:7104]
90. KIAA1551 ENSGALG00000045168 3435 0.876 - - 0.876 - - - - - - - KIAA1551, transcript variant X1
91. AP3D1 ENSGALG00000000996 16143 0.874 - - 0.874 - - - - - - - adaptor related protein complex 3 delta 1 subunit, transcript variant X2
92. RBM5 30998 0.869 - - - - 0.869 - - - - - RNA binding motif protein 5, transcript variant X1
93. TLE4 TLE4 7278 0.869 - - - - - - - 0.869 - -
94. ARHGAP18 ENSGALG00000031843 2117 0.866 - - - - - - - 0.866 - - Rho GTPase activating protein 18 [Source:HGNC Symbol;Acc:HGNC:21035]
95. EHMT1 ENSGALG00000033678 5720 0.862 - - - - - - - 0.862 - - euchromatic histone lysine methyltransferase 1 [Source:NCBI gene;Acc:417250]
96. GATA6 ENSGALG00000014976 3256 0.861 - - - - - - - 0.861 - - GATA binding protein 6 [Source:NCBI gene;Acc:396390]
97. BASP1 ENSGALG00000012952 19549 0.861 - - - - - - - 0.861 - - brain abundant membrane attached signal protein 1 [Source:NCBI gene;Acc:373905]
98. RAB14 ENSGALG00000001474 12617 0.861 - - - - - - - 0.861 - - RAB14, member RAS oncogene family [Source:NCBI gene;Acc:417119]
99. POC1A ENSGALG00000034572 1572 0.859 - - - - - - - 0.859 - - POC1 centriolar protein A [Source:HGNC Symbol;Acc:HGNC:24488]
100. PALLD ENSGALG00000009650 10803 0.85 - - 0.850 - - - - - - - palladin, cytoskeletal associated protein [Source:HGNC Symbol;Acc:HGNC:17068]

There are 396 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA