Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PUM1

Gene Name Gene ID Reads Annotation
PUM1 ENSGALG00000042598 9392 pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]











Genes with expression patterns similar to PUM1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PUM1 ENSGALG00000042598 9392 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
2. TLK2 ENSGALG00000000410 4690 1.979 - - - - 0.984 - - 0.995 - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
3. AATF ENSGALG00000005420 6501 1.942 - - - - 0.970 - - 0.972 - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
4. KPNA3 ENSGALG00000017009 17330 1.814 - - - - 0.963 - - 0.851 - - karyopherin subunit alpha 3 [Source:NCBI gene;Acc:418870]
5. COIL ENSGALG00000003158 7806 1.777 - - - - 0.981 - 0.796 - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
6. LZTFL1 ENSGALG00000033928 3493 1.775 - - - - - - 0.782 0.993 - - leucine zipper transcription factor like 1 [Source:HGNC Symbol;Acc:HGNC:6741]
7. GBAS 18453 1.759 - - - - 0.934 - - 0.825 - - glioblastoma amplified sequence
8. RCAN3 ENSGALG00000004282 7778 1.689 - - - - 0.952 - 0.737 - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
9. IGDCC4 ENSGALG00000007410 5457 1.679 - - - - 0.964 - 0.715 - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
10. CDC42SE2 ENSGALG00000027258 4725 1.678 - - - - 0.970 - 0.708 - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
11. MRPS18A ENSGALG00000010296 11039 1.665 - - - - - - 0.702 0.963 - - mitochondrial ribosomal protein S18A [Source:NCBI gene;Acc:421445]
12. SKP2 ENSGALG00000003547 14637 1.66 - - - - 0.944 - 0.716 - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
13. PNRC2 ENSGALG00000004122 19228 1.659 - - - - 0.945 - 0.714 - - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
14. CPSF6 ENSGALG00000019355 7634 1.648 - - - - - - 0.703 0.945 - - cleavage and polyadenylation specific factor 6 [Source:NCBI gene;Acc:417844]
15. RRP9 ENSGALG00000043359 9747 1.642 - - - - - - 0.777 0.865 - - ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]
16. ZNF644 ENSGALG00000034253 28348 1.593 0.717 - - - - - - 0.876 - - zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
17. MCTS1 ENSGALG00000008517 27514 1.548 - - - - - - 0.714 0.834 - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
18. PTP4A2 ENSGALG00000003265 24826 1.462 - - - - - - 0.709 - - 0.753 protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:HGNC:9635]
19. ITGA1 ENSGALG00000014891 11378 0.996 - - - - - - - 0.996 - - integrin subunit alpha 1 [Source:NCBI gene;Acc:395951]
20. URB1 ENSGALG00000015887 5854 0.995 - - - - - - - 0.995 - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:17344]
21. TCTN3 ENSGALG00000010517 3985 0.995 - - - - - - - 0.995 - - tectonic family member 3 [Source:NCBI gene;Acc:100857412]
22. VATB VATB 13756 0.995 - - - - - - - 0.995 - -
23. VIMENTIN VIMENTIN 33105 0.995 - - - - - - - 0.995 - -
24. PRKRIP1 ENSGALG00000001833 5092 0.994 - - - - - - - 0.994 - - PRKR interacting protein 1 [Source:NCBI gene;Acc:417508]
25. COX20 ENSGALG00000027440 5881 0.994 - - - - - - - 0.994 - - COX20, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:421493]
26. SPTAN1 ENSGALG00000004719 20251 0.994 - - - - - - - 0.994 - - spectrin alpha, non-erythrocytic 1 [Source:NCBI gene;Acc:374234]
27. KIAA1324L ENSGALG00000030324 1695 0.993 - - - - - - - 0.993 - - KIAA1324 like [Source:HGNC Symbol;Acc:HGNC:21945]
28. EXOC4 ENSGALG00000008477 4684 0.993 - - - - - - - 0.993 - - exocyst complex component 4 [Source:NCBI gene;Acc:416700]
29. AMOTL2 5217 0.993 - - - - - - - 0.993 - - angiomotin like 2, transcript variant X3
30. CDCA9 ENSGALG00000021225 2244 0.993 - - - - - - - 0.993 - - cell division cycle associated 9 [Source:NCBI gene;Acc:415745]
31. ACAD8 ENSGALG00000001557 2562 0.993 - - - - - - - 0.993 - - acyl-CoA dehydrogenase family member 8 [Source:NCBI gene;Acc:419739]
32. SLC25A15 ENSGALG00000017032 6773 0.993 - - - - - - - 0.993 - - solute carrier family 25 member 15 [Source:NCBI gene;Acc:418886]
33. ARL4A ENSGALG00000027757 4285 0.992 - - - - - - - 0.992 - - ADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]
34. PLA2R1 ENSGALG00000011149 1964 0.992 - - - - - - - 0.992 - - phospholipase A2 receptor 1 [Source:NCBI gene;Acc:404304]
35. SLC35E1 ENSGALG00000003794 2563 0.992 - - - - - - - 0.992 - - solute carrier family 35 member E1 [Source:HGNC Symbol;Acc:HGNC:20803]
36. PDCD2 ENSGALG00000011169 3594 0.992 - - - - - - - 0.992 - - programmed cell death 2 [Source:NCBI gene;Acc:421550]
37. KIAA1598 KIAA1598 989 0.992 - - - - - - - 0.992 - -
38. KCTD10 ENSGALG00000005138 1191 0.991 - - - - - - - 0.991 - - potassium channel tetramerization domain containing 10 [Source:HGNC Symbol;Acc:HGNC:23236]
39. PPP2R3C ENSGALG00000010052 637 0.991 - - - - - - - 0.991 - - protein phosphatase 2 regulatory subunit B''gamma [Source:HGNC Symbol;Acc:HGNC:17485]
40. PPP1R21 ENSGALG00000008937 2343 0.991 - - - - - - - 0.991 - - protein phosphatase 1 regulatory subunit 21 [Source:NCBI gene;Acc:421287]
41. SLC2A10 ENSGALG00000004498 421 0.991 - - - - - - - 0.991 - - solute carrier family 2 member 10 [Source:HGNC Symbol;Acc:HGNC:13444]
42. FBN2 ENSGALG00000014686 4538 0.991 - - - - - - - 0.991 - - fibrillin 2 [Source:HGNC Symbol;Acc:HGNC:3604]
43. PKIB ENSGALG00000027036 1663 0.991 - - - - - - - 0.991 - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:NCBI gene;Acc:769402]
44. KCNE3 ENSGALG00000022696 561 0.99 - - - - - - - 0.990 - - potassium voltage-gated channel subfamily E regulatory subunit 3 [Source:HGNC Symbol;Acc:HGNC:6243]
45. KDELR3 ENSGALG00000032313 4376 0.989 - - - - - - - 0.989 - - KDEL endoplasmic reticulum protein retention receptor 3 [Source:NCBI gene;Acc:418026]
46. MYO1B ENSGALG00000007712 8755 0.986 - - - - - - - 0.986 - - myosin IB [Source:HGNC Symbol;Acc:HGNC:7596]
47. ZBTB10 ENSGALG00000034376 3271 0.985 - - - - 0.985 - - - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
48. IGBP1 ENSGALG00000044628 9200 0.984 - - - - 0.984 - - - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
49. LATS2 4776 0.984 - - - - 0.984 - - - - - large tumor suppressor kinase 2
50. ENSGALG00000011687 ENSGALG00000011687 4553 0.983 - - - - 0.983 - - - - -
51. CBWD1 ENSGALG00000010147 2765 0.983 - - - - 0.983 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
52. ELL2 ENSGALG00000014678 1111 0.983 - - - - 0.983 - - - - - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
53. SIRT1 ENSGALG00000002761 9028 0.983 - - - - 0.983 - - - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
54. NAP1L1 ENSGALG00000010238 14506 0.983 - - - - 0.983 - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
55. KNOP1 ENSGALG00000002042 6251 0.982 - - - - 0.982 - - - - - lysine-rich nucleolar protein 1, transcript variant X1
56. XPO7 ENSGALG00000001838 1875 0.982 - - - - 0.982 - - - - - exportin 7 [Source:NCBI gene;Acc:426925]
57. COMMD8 ENSGALG00000026279 13509 0.982 - - - - 0.982 - - - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
58. REST 2394 0.982 - - - - 0.982 - - - - - RE1 silencing transcription factor
59. TLCD1 ENSGALG00000003973 17569 0.982 - - - - 0.982 - - - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
60. EAPP ENSGALG00000010007 5080 0.982 - - - - 0.982 - - - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
61. TRAPPC12 ENSGALG00000016387 2593 0.982 - - - - 0.982 - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
62. IGF1R ENSGALG00000040651 772 0.982 - - - - 0.982 - - - - - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
63. CTSZ ENSGALG00000007462 630 0.981 - - - - 0.981 - - - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
64. NFASC ENSGALG00000031776 4264 0.981 - - - - 0.981 - - - - - neurofascin [Source:NCBI gene;Acc:419824]
65. SSPN ENSGALG00000014042 638 0.981 - - - - 0.981 - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
66. ATG5 ENSGALG00000015387 7752 0.98 - - - - 0.980 - - - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
67. MRPS27 ENSGALG00000015002 6541 0.98 - - - - 0.980 - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
68. DNAJC12 ENSGALG00000002769 1418 0.98 - - - - 0.980 - - - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
69. TCP11L1 ENSGALG00000011688 2427 0.98 - - - - 0.980 - - - - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
70. MRPS25 ENSGALG00000008506 12131 0.979 - - - - 0.979 - - - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
71. DDX55 ENSGALG00000003298 2315 0.979 - - - - 0.979 - - - - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
72. CZH9ORF41 CZH9ORF41 3492 0.979 - - - - 0.979 - - - - -
73. WDR82 ENSGALG00000025904 4783 0.979 - - - - 0.979 - - - - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
74. BAG4 ENSGALG00000003254 5751 0.978 - - - - 0.978 - - - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
75. MRPL23 ENSGALG00000006561 13737 0.978 - - - - 0.978 - - - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
76. CSNK1G1 ENSGALG00000030812 31618 0.978 - - - - 0.978 - - - - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
77. MKI67 ENSGALG00000025996 28136 0.978 - - - - 0.978 - - - - - marker of proliferation Ki-67, transcript variant X3
78. SSR2 ENSGALG00000000764 32190 0.978 - - - - 0.978 - - - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
79. STK3 ENSGALG00000032850 6339 0.977 - - - - 0.977 - - - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
80. POLR2B ENSGALG00000011387 4864 0.977 - - - - 0.977 - - - - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
81. RABEP1 ENSGALG00000001737 2650 0.977 - - - - 0.977 - - - - - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
82. SHROOM2 ENSGALG00000030802 4517 0.977 - - - - 0.977 - - - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
83. POLR3F ENSGALG00000008749 5645 0.976 - - - - 0.976 - - - - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
84. REEP5 ENSGALG00000023157 6282 0.976 - - - - 0.976 - - - - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
85. SFSWAP ENSGALG00000002487 9977 0.976 - - - - 0.976 - - - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
86. FH ENSGALG00000013165 13669 0.975 - - - - 0.975 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
87. KBTBD2 ENSGALG00000038704 2821 0.974 - - - - - - - 0.974 - - kelch repeat and BTB domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21751]
88. FERMT2 ENSGALG00000012425 5480 0.974 - - - - 0.974 - - - - - fermitin family member 2 [Source:HGNC Symbol;Acc:HGNC:15767]
89. ENSGALG00000014852 ENSGALG00000014852 15288 0.974 - - - - 0.974 - - - - -
90. TMEM165 ENSGALG00000027886 5468 0.974 - - - - 0.974 - - - - - transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
91. PSPC1 ENSGALG00000017142 13036 0.973 - - - - 0.973 - - - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
92. YY1 ENSGALG00000017388 1933 0.973 - - - - 0.973 - - - - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
93. CDC45 ENSGALG00000001616 8432 0.973 - - - - - - - 0.973 - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
94. DGKD ENSGALG00000001730 4456 0.973 - - - - - - - 0.973 - - diacylglycerol kinase delta [Source:HGNC Symbol;Acc:HGNC:2851]
95. SAR1B ENSGALG00000038753 6493 0.972 - - - - 0.972 - - - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
96. FBXO9 ENSGALG00000016320 9600 0.971 - - - - 0.971 - - - - - F-box protein 9 [Source:NCBI gene;Acc:421895]
97. ENSGALG00000004132 ENSGALG00000004132 9287 0.971 - - - - - - - 0.971 - -
98. TK2 ENSGALG00000034216 5394 0.97 - - - - 0.970 - - - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
99. PLAA ENSGALG00000001782 5459 0.97 - - - - 0.970 - - - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
100. PCBP4 ENSGALG00000027695 7937 0.969 - - - - 0.969 - - - - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]

There are 355 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA