Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PUF60

Gene Name Gene ID Reads Annotation
PUF60 ENSGALG00000039901 26902 poly(U) binding splicing factor 60 [Source:NCBI gene;Acc:426402]











Genes with expression patterns similar to PUF60

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PUF60 ENSGALG00000039901 26902 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 poly(U) binding splicing factor 60 [Source:NCBI gene;Acc:426402]
2. TBRG4 ENSGALG00000038102 9269 2.711 - - - - 0.966 - 0.993 0.752 - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
3. CENPE ENSGALG00000013208 12337 1.955 - - - - 0.974 - 0.981 - - - centromere protein E, transcript variant X4
4. MCM4 ENSGALG00000012915 13151 1.795 - - - - 0.976 - - 0.819 - - minichromosome maintenance complex component 4
5. UBE2I ENSGALG00000006428 18421 1.765 - - - - 0.786 - 0.979 - - - ubiquitin conjugating enzyme E2 I [Source:NCBI gene;Acc:374123]
6. MAP1B ENSGALG00000014999 6288 1.764 - - - - 0.969 - - 0.795 - - microtubule associated protein 1B
7. TM2D2 ENSGALG00000003356 7088 1.762 - - - - 0.970 - - 0.792 - - TM2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24127]
8. C4orf27 C4orf27 16724 1.734 - - - - 0.970 - - 0.764 - -
9. INCENP ENSGALG00000007537 16617 1.725 - - - - 0.961 - - 0.764 - - inner centromere protein [Source:NCBI gene;Acc:396270]
10. ANO5 ENSGALG00000003748 3959 1.718 - - - - - - 0.983 0.735 - - anoctamin 5 [Source:NCBI gene;Acc:422973]
11. SEC63 ENSGALG00000015308 11596 1.705 - - - - 0.950 - - 0.755 - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
12. SEC61A2 ENSGALG00000036300 4235 1.704 - - - - 0.965 - - 0.739 - - Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321620]
13. CREPT CREPT 17142 1.674 - - - - 0.973 - - 0.701 - -
14. AZIN1 ENSGALG00000029295 11085 1.621 - - - - 0.820 - - 0.801 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
15. ZNF217 ZNF217 14511 1.551 - - - - - - 0.824 0.727 - -
16. NCL ENSGALG00000032930 66655 0.994 - - - - - - 0.994 - - - nucleolin [Source:NCBI gene;Acc:396201]
17. SDC3 ENSGALG00000035184 14096 0.993 - - - - - - 0.993 - - - syndecan 3 [Source:NCBI gene;Acc:396343]
18. SERPINE2 ENSGALG00000005135 16108 0.99 - - - - - - 0.990 - - - serpin family E member 2 [Source:NCBI gene;Acc:424805]
19. PCMT1 ENSGALG00000012388 7778 0.987 - - - - - - 0.987 - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:NCBI gene;Acc:428607]
20. KIF23 ENSGALG00000008095 9919 0.985 - - - - - - 0.985 - - - kinesin family member 23 [Source:NCBI gene;Acc:415567]
21. RND3 ENSGALG00000026313 9271 0.984 - - - - - - 0.984 - - - Rho family GTPase 3 [Source:HGNC Symbol;Acc:HGNC:671]
22. OGT ENSGALG00000005425 31074 0.984 - - - - - - 0.984 - - - O-linked N-acetylglucosamine (GlcNAc) transferase [Source:HGNC Symbol;Acc:HGNC:8127]
23. DIABLO ENSGALG00000004412 9499 0.984 - - - - - - 0.984 - - - diablo IAP-binding mitochondrial protein, transcript variant X3
24. AP1M1 ENSGALG00000003959 31761 0.984 - - - - - - 0.984 - - - adaptor related protein complex 1 subunit mu 1 [Source:NCBI gene;Acc:420149]
25. STRAP ENSGALG00000013092 13100 0.984 - - - - - - 0.984 - - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
26. ARG2 ENSGALG00000009519 19523 0.983 - - - - - - 0.983 - - - arginase 2 [Source:NCBI gene;Acc:423272]
27. TRAPPC8 ENSGALG00000015157 4308 0.983 - - - - - - 0.983 - - - trafficking protein particle complex 8, transcript variant X5
28. SEPHS1 ENSGALG00000014575 10701 0.983 - - - - - - 0.983 - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
29. C4H8ORF40 C4H8ORF40 6145 0.983 - - - - - - 0.983 - - -
30. RALGDS ENSGALG00000003412 4478 0.982 - - - - - - 0.982 - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
31. PRKX ENSGALG00000042759 2418 0.982 - - - - - - 0.982 - - - protein kinase X-linked [Source:HGNC Symbol;Acc:HGNC:9441]
32. SGK1 ENSGALG00000013971 2608 0.982 - - - - - - 0.982 - - - serum/glucocorticoid regulated kinase 1 [Source:NCBI gene;Acc:395133]
33. ZNF462 ENSGALG00000015451 12653 0.982 - - - - - - 0.982 - - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
34. RBM24 ENSGALG00000012712 4138 0.982 - - - - - - 0.982 - - - RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
35. C5H15ORF57 C5H15ORF57 4113 0.982 - - - - - - 0.982 - - -
36. LYN ENSGALG00000042321 3539 0.982 - - - - - - 0.982 - - - LYN proto-oncogene, Src family tyrosine kinase [Source:NCBI gene;Acc:421127]
37. SPPL2A ENSGALG00000031348 16700 0.981 - - - - - - 0.981 - - - signal peptide peptidase like 2A [Source:NCBI gene;Acc:415450]
38. CAMK2D ENSGALG00000041635 3384 0.981 - - - - - - 0.981 - - - calcium/calmodulin dependent protein kinase II delta [Source:NCBI gene;Acc:422688]
39. VPS13B 2293 0.981 - - - - - - 0.981 - - - vacuolar protein sorting 13 homolog B
40. WWP1 ENSGALG00000041795 2291 0.981 - - - - - - 0.981 - - - WW domain containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:420212]
41. ENSGALG00000027132 ENSGALG00000027132 1704 0.981 - - - - - - 0.981 - - -
42. C10orf54 C10orf54 2444 0.981 - - - - - - 0.981 - - -
43. TMEM18 ENSGALG00000028744 11779 0.98 - - - - 0.980 - - - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
44. CHTOP ENSGALG00000042129 24112 0.98 - - - - - - 0.980 - - - chromatin target of PRMT1 [Source:HGNC Symbol;Acc:HGNC:24511]
45. NDUFA4 ENSGALG00000025999 53323 0.979 - - - - - - 0.979 - - - NDUFA4, mitochondrial complex associated [Source:NCBI gene;Acc:772135]
46. GOLPH3 ENSGALG00000028267 9692 0.979 - - - - - - 0.979 - - - golgi phosphoprotein 3, transcript variant X1
47. TMF1 ENSGALG00000013408 3344 0.978 - - - - - - 0.978 - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
48. TF ENSGALG00000006453 14007 0.977 - - - - - - 0.977 - - - transferrin (ovotransferrin) [Source:NCBI gene;Acc:396241]
49. ARHGDIA ENSGALG00000008443 39103 0.975 - - - - - - 0.975 - - - Rho GDP dissociation inhibitor alpha [Source:NCBI gene;Acc:769231]
50. THBS1 ENSGALG00000009626 3521 0.973 - - - - 0.973 - - - - - thrombospondin 1 [Source:NCBI gene;Acc:373987]
51. HMGB3 ENSGALG00000009071 12011 0.973 - - - - 0.973 - - - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
52. MRPS11 ENSGALG00000006777 16009 0.973 - - - - 0.973 - - - - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
53. TRIM33 ENSGALG00000001976 7404 0.972 - - - - 0.972 - - - - - tripartite motif containing 33 [Source:HGNC Symbol;Acc:HGNC:16290]
54. PGAM5 ENSGALG00000002137 7700 0.971 - - - - 0.971 - - - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
55. EPB41L1 ENSGALG00000034171 3616 0.971 - - - - 0.971 - - - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
56. CCDC59 ENSGALG00000028648 9272 0.971 - - - - 0.971 - - - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
57. USP1 ENSGALG00000010957 8297 0.971 - - - - 0.971 - - - - - ubiquitin specific peptidase 1 [Source:NCBI gene;Acc:424685]
58. DNAJC2 ENSGALG00000008249 28064 0.971 - - - - 0.971 - - - - - DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
59. WHSC1L1 4065 0.97 - - - - 0.970 - - - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X8
60. MRPL22 ENSGALG00000003919 2760 0.97 - - - - 0.970 - - - - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
61. BCL9 ENSGALG00000037655 4620 0.97 - - - - 0.970 - - - - - B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
62. NOL6 ENSGALG00000030730 7191 0.97 - - - - 0.970 - - - - - nucleolar protein 6
63. HOXB3 ENSGALG00000043219 5198 0.97 - - - - 0.970 - - - - - homeobox B3 [Source:NCBI gene;Acc:395502]
64. MYEOV2 MYEOV2 5155 0.97 - - - - 0.970 - - - - -
65. TBC1D7 ENSGALG00000012731 4891 0.97 - - - - 0.970 - - - - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
66. MED1 ENSGALG00000001708 9556 0.97 - - - - 0.970 - - - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
67. ANXA2 ENSGALG00000003770 18252 0.969 - - - - - - 0.969 - - - annexin A2 [Source:NCBI gene;Acc:396297]
68. CCT8 ENSGALG00000015821 12161 0.969 - - - - - - 0.969 - - - chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
69. AGPAT3 ENSGALG00000031932 6903 0.969 - - - - 0.969 - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
70. LUC7L2 ENSGALG00000036238 11817 0.969 - - - - 0.969 - - - - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
71. M6PR ENSGALG00000031681 9442 0.968 - - - - 0.968 - - - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
72. ETF1 ENSGALG00000002262 14560 0.968 - - - - 0.968 - - - - - eukaryotic translation termination factor 1 [Source:HGNC Symbol;Acc:HGNC:3477]
73. RNF113A ENSGALG00000000538 3985 0.968 - - - - 0.968 - - - - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
74. NDST2 ENSGALG00000005107 4224 0.968 - - - - 0.968 - - - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
75. IBA57 ENSGALG00000005328 4362 0.967 - - - - 0.967 - - - - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
76. KCTD9 ENSGALG00000000275 3455 0.967 - - - - 0.967 - - - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
77. gga-mir-6584 ENSGALG00000028834 1481 0.967 - - - - 0.967 - - - - - gga-mir-6584 [Source:miRBase;Acc:MI0022404]
78. BRP44L BRP44L 30452 0.967 - - - - 0.967 - - - - -
79. RAE1 ENSGALG00000007653 8930 0.966 - - - - 0.966 - - - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
80. HYOU1 ENSGALG00000007659 3555 0.966 - - - - 0.966 - - - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
81. NSG1 ENSGALG00000015010 5829 0.966 - - - - 0.966 - - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
82. NUP37 ENSGALG00000012759 9985 0.966 - - - - 0.966 - - - - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
83. TMEM39B ENSGALG00000003287 4125 0.966 - - - - 0.966 - - - - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
84. TCF7L2 ENSGALG00000008883 13688 0.966 - - - - 0.966 - - - - - transcription factor 7-like 2 (T-cell specific, HMG-box) [Source:NCBI gene;Acc:395508]
85. SAMM50 ENSGALG00000014194 20437 0.966 - - - - 0.966 - - - - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
86. MRPL46 ENSGALG00000006782 5033 0.966 - - - - 0.966 - - - - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
87. PPAPDC1B PPAPDC1B 6698 0.965 - - - - 0.965 - - - - -
88. OAF ENSGALG00000006715 12518 0.965 - - - - 0.965 - - - - - out at first homolog [Source:NCBI gene;Acc:395161]
89. HTRA3 ENSGALG00000034673 512 0.965 - - - - 0.965 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
90. ABCC1 ENSGALG00000006646 2596 0.965 - - - - 0.965 - - - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
91. OPTC ENSGALG00000003554 3698 0.964 - - - - 0.964 - - - - - opticin [Source:NCBI gene;Acc:395130]
92. PHKA1 ENSGALG00000004801 2510 0.963 - - - - 0.963 - - - - - phosphorylase kinase regulatory subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:8925]
93. ENSGALG00000026041 ENSGALG00000026041 13390 0.962 - - - - 0.962 - - - - -
94. MORN4 ENSGALG00000006149 7772 0.962 - - - - 0.962 - - - - - MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
95. ENSGALG00000000360 ENSGALG00000000360 15320 0.962 - - - - 0.962 - - - - -
96. RILPL2 ENSGALG00000003321 5632 0.961 - - - - 0.961 - - - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
97. UQCRC2 ENSGALG00000002490 23477 0.961 - - - - 0.961 - - - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
98. RAB21 ENSGALG00000010183 7718 0.961 - - - - 0.961 - - - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
99. C15H12ORF49 C15H12ORF49 13250 0.959 - - - - 0.959 - - - - -
100. VPS8 ENSGALG00000006704 5419 0.959 - - - - 0.959 - - - - - VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]

There are 366 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA