Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PTRHD1

Gene Name Gene ID Reads Annotation
PTRHD1 ENSGALG00000016610 3636 peptidyl-tRNA hydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33782]











Genes with expression patterns similar to PTRHD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTRHD1 ENSGALG00000016610 3636 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 peptidyl-tRNA hydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33782]
2. HINT3 ENSGALG00000044342 5674 1.829 - - - 0.837 - - 0.992 - - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
3. C5orf22 ENSGALG00000012909 3537 1.756 - - - 0.764 - - 0.992 - - - chromosome 5 open reading frame 22 [Source:HGNC Symbol;Acc:HGNC:25639]
4. KIN ENSGALG00000030702 1608 1.637 - - - 0.820 - - - 0.817 - - Kin17 DNA and RNA binding protein [Source:HGNC Symbol;Acc:HGNC:6327]
5. DEPDC5 ENSGALG00000006766 1592 1.594 - - - 0.868 - - - 0.726 - - DEP domain containing 5, transcript variant X6
6. ENTPD4 ENSGALG00000000390 1394 1.54 - - 0.722 0.818 - - - - - - ectonucleoside triphosphate diphosphohydrolase 4 [Source:HGNC Symbol;Acc:HGNC:14573]
7. LRP12 ENSGALG00000033630 2534 1.505 - - - 0.751 - - - 0.754 - - LDL receptor related protein 12 [Source:HGNC Symbol;Acc:HGNC:31708]
8. ARMC1 ENSGALG00000036567 5476 1 - - - - - - 1.000 - - - armadillo repeat containing 1 [Source:NCBI gene;Acc:429406]
9. BMP7 ENSGALG00000007668 6645 0.998 - - - - - - 0.998 - - - bone morphogenetic protein 7 [Source:HGNC Symbol;Acc:HGNC:1074]
10. ZFP91 ENSGALG00000007287 13681 0.997 - - - - - - 0.997 - - - ZFP91 zinc finger protein
11. MTRR ENSGALG00000039424 3197 0.993 - - - - - - 0.993 - - - 5-methyltetrahydrofolate-homocysteine methyltransferase reductase [Source:HGNC Symbol;Acc:HGNC:7473]
12. D1A D1A 1026 0.993 - - - - - - 0.993 - - -
13. PPP2R3B ENSGALG00000016702 1538 0.993 - - - - - - 0.993 - - - protein phosphatase 2 regulatory subunit B''beta, transcript variant X5
14. IRX2 ENSGALG00000013193 2170 0.993 - - - - - - 0.993 - - - iroquois homeobox 2 [Source:NCBI gene;Acc:373975]
15. NAE1 ENSGALG00000038957 13777 0.993 - - - - - - 0.993 - - - NEDD8 activating enzyme E1 subunit 1 [Source:NCBI gene;Acc:415792]
16. GRSF1 2406 0.993 - - - - - - 0.993 - - - G-rich RNA sequence binding factor 1, transcript variant X2
17. ELP3 ENSGALG00000016624 4483 0.992 - - - - - - 0.992 - - - elongator acetyltransferase complex subunit 3 [Source:NCBI gene;Acc:422021]
18. SEC62 ENSGALG00000009379 15745 0.992 - - - - - - 0.992 - - - SEC62 homolog, preprotein translocation factor [Source:NCBI gene;Acc:424993]
19. SUPT4H1 ENSGALG00000000944 8675 0.992 - - - - - - 0.992 - - - SPT4 homolog, DSIF elongation factor subunit [Source:NCBI gene;Acc:417470]
20. ARL14EP ENSGALG00000012139 4690 0.992 - - - - - - 0.992 - - - ADP ribosylation factor like GTPase 14 effector protein [Source:NCBI gene;Acc:421605]
21. RBM38 ENSGALG00000026081 7115 0.992 - - - - - - 0.992 - - - RNA binding motif protein 38 [Source:NCBI gene;Acc:768866]
22. PSIP1 ENSGALG00000015105 8322 0.992 - - - - - - 0.992 - - - PC4 and SFRS1 interacting protein 1 [Source:NCBI gene;Acc:431605]
23. ZWILCH ENSGALG00000007736 4939 0.991 - - - - - - 0.991 - - - zwilch kinetochore protein [Source:HGNC Symbol;Acc:HGNC:25468]
24. EPCAM ENSGALG00000008969 10014 0.991 - - - - - - 0.991 - - - epithelial cell adhesion molecule [Source:NCBI gene;Acc:421292]
25. ISY1 ENSGALG00000005012 7477 0.991 - - - - - - 0.991 - - - ISY1 splicing factor homolog
26. MAP3K4 ENSGALG00000020003 6378 0.991 - - - - - - 0.991 - - - mitogen-activated protein kinase kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6856]
27. FAM72A ENSGALG00000000791 17723 0.99 - - - - - - 0.990 - - - family with sequence similarity 72 member A, transcript variant X1
28. UBLCP1 ENSGALG00000003672 9332 0.985 - - - - - - 0.985 - - - ubiquitin like domain containing CTD phosphatase 1 [Source:NCBI gene;Acc:416237]
29. PDAP1 ENSGALG00000036552 28881 0.983 - - - - - - 0.983 - - - PDGFA associated protein 1 [Source:HGNC Symbol;Acc:HGNC:14634]
30. COX7B ENSGALG00000007863 59194 0.971 - - - - - - 0.971 - - - cytochrome c oxidase subunit 7B [Source:NCBI gene;Acc:771947]
31. RBM5 30998 0.97 - - - - - - 0.970 - - - RNA binding motif protein 5, transcript variant X1
32. POLR2L ENSGALG00000006841 33915 0.97 - - - - - - 0.970 - - - RNA polymerase II subunit L [Source:NCBI gene;Acc:770704]
33. GDI2 ENSGALG00000008169 67151 0.969 - - - - - - 0.969 - - - GDP dissociation inhibitor 2 [Source:NCBI gene;Acc:395854]
34. EIF3E ENSGALG00000037067 36561 0.966 - - - - - - 0.966 - - - eukaryotic translation initiation factor 3 subunit E [Source:NCBI gene;Acc:420272]
35. HSPD1 ENSGALG00000008094 40870 0.965 - - - - - - 0.965 - - - heat shock protein family D (Hsp60) member 1 [Source:NCBI gene;Acc:424059]
36. CDC42SE1 ENSGALG00000028119 14813 0.948 - - - - - - 0.948 - - - CDC42 small effector 1 [Source:HGNC Symbol;Acc:HGNC:17719]
37. CAPZB ENSGALG00000004034 19630 0.946 - - - - - - 0.946 - - - capping actin protein of muscle Z-line beta subunit [Source:NCBI gene;Acc:396418]
38. PNRC1 ENSGALG00000015780 75894 0.932 - - - - - - 0.932 - - - proline rich nuclear receptor coactivator 1 [Source:NCBI gene;Acc:421817]
39. TYMS ENSGALG00000014897 20484 0.927 - - - - - - 0.927 - - - thymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]
40. MLF2 ENSGALG00000014468 45953 0.924 - - - - - - 0.924 - - - myeloid leukemia factor 2 [Source:NCBI gene;Acc:418284]
41. HSP90B1 ENSGALG00000033789 58910 0.921 - - - - - - 0.921 - - - heat shock protein 90 beta family member 1 [Source:NCBI gene;Acc:374163]
42. RPL27A ENSGALG00000005948 363481 0.908 - - - - - - 0.908 - - - ribosomal protein L27a [Source:NCBI gene;Acc:770018]
43. ENSGALG00000027412 ENSGALG00000027412 202 0.896 - - - 0.896 - - - - - -
44. TBK1 ENSGALG00000009840 1650 0.896 - - - 0.896 - - - - - - TANK binding kinase 1 [Source:NCBI gene;Acc:417825]
45. NECAB3 ENSGALG00000003065 417 0.894 - - - 0.894 - - - - - - N-terminal EF-hand calcium binding protein 3 [Source:NCBI gene;Acc:419154]
46. SNORA31 SNORA31 183 0.893 - - - 0.893 - - - - - -
47. TRIM62 ENSGALG00000028437 5124 0.892 - - - 0.892 - - - - - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
48. MLH3 ENSGALG00000010304 231 0.891 - - - 0.891 - - - - - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]
49. KIF6 ENSGALG00000010057 84 0.889 - - - 0.889 - - - - - - kinesin family member 6 [Source:HGNC Symbol;Acc:HGNC:21202]
50. PANK1 ENSGALG00000006431 2910 0.889 - - - 0.889 - - - - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
51. ZBTB17 ENSGALG00000035352 280 0.888 - - - 0.888 - - - - - - zinc finger and BTB domain containing 17 [Source:NCBI gene;Acc:396541]
52. KIAA1462 1612 0.887 - - - 0.887 - - - - - - KIAA1462, transcript variant X4
53. GFPT2 ENSGALG00000039705 562 0.887 - - - 0.887 - - - - - - glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]
54. DBN1 ENSGALG00000033405 216 0.886 - - - 0.886 - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
55. MRPS30 ENSGALG00000014874 3416 0.885 - - - 0.885 - - - - - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
56. KIAA1432 KIAA1432 1792 0.885 - - - 0.885 - - - - - -
57. RBFOX1 ENSGALG00000034325 2133 0.883 - - - 0.883 - - - - - - RNA binding fox-1 homolog 1 [Source:HGNC Symbol;Acc:HGNC:18222]
58. GUF1 ENSGALG00000014217 211 0.882 - - - 0.882 - - - - - - GUF1 homolog, GTPase [Source:HGNC Symbol;Acc:HGNC:25799]
59. FRRS1 ENSGALG00000005418 332 0.88 - - - 0.880 - - - - - - ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
60. ELMOD1 ENSGALG00000017169 2303 0.878 - - - 0.878 - - - - - - ELMO domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25334]
61. ASRGL1 ENSGALG00000015949 403 0.878 - - - 0.878 - - - - - - asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
62. VWDE ENSGALG00000042443 160 0.878 - - - 0.878 - - - - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
63. VPS13B 2293 0.876 - - - 0.876 - - - - - - vacuolar protein sorting 13 homolog B
64. ASCC1 ENSGALG00000026019 3583 0.875 - - - 0.875 - - - - - - activating signal cointegrator 1 complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:24268]
65. RNPC3 ENSGALG00000005162 269 0.874 - - - 0.874 - - - - - - RNA binding region (RNP1, RRM) containing 3 [Source:HGNC Symbol;Acc:HGNC:18666]
66. ABCD2 ENSGALG00000042554 1607 0.873 - - - 0.873 - - - - - - ATP binding cassette subfamily D member 2 [Source:NCBI gene;Acc:417694]
67. GALNT12 ENSGALG00000013197 1330 0.872 - - - 0.872 - - - - - - polypeptide N-acetylgalactosaminyltransferase 12 [Source:HGNC Symbol;Acc:HGNC:19877]
68. TAX1BP3 ENSGALG00000004618 35172 0.872 - - - - - - 0.872 - - - Tax1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30684]
69. PRKD1 ENSGALG00000009900 2094 0.87 - - - 0.870 - - - - - - protein kinase D1 [Source:NCBI gene;Acc:423302]
70. IRF6 ENSGALG00000001405 3144 0.866 - - - 0.866 - - - - - - interferon regulatory factor 6 [Source:HGNC Symbol;Acc:HGNC:6121]
71. CA3 CA3 200 0.866 - - - 0.866 - - - - - -
72. ADCY9 ENSGALG00000007779 766 0.866 - - - 0.866 - - - - - - adenylate cyclase 9 [Source:NCBI gene;Acc:395339]
73. WDR96 WDR96 255 0.865 - - - 0.865 - - - - - -
74. MOSPD1 ENSGALG00000006132 8503 0.864 - - - 0.864 - - - - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
75. CYP20A1 ENSGALG00000008730 930 0.862 - - - 0.862 - - - - - - cytochrome P450 family 20 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:20576]
76. TGS1 ENSGALG00000015340 5897 0.86 - - - 0.860 - - - - - - trimethylguanosine synthase 1 [Source:NCBI gene;Acc:421126]
77. MRPL40 ENSGALG00000001587 20893 0.857 - - - 0.857 - - - - - - mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:HGNC:14491]
78. CHCHD3 ENSGALG00000006489 18592 0.856 - - - 0.856 - - - - - - coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21906]
79. NCOA3 ENSGALG00000004570 243 0.856 - - - 0.856 - - - - - - nuclear receptor coactivator 3 [Source:HGNC Symbol;Acc:HGNC:7670]
80. DPP8 ENSGALG00000007437 1763 0.856 - - - 0.856 - - - - - - dipeptidyl peptidase 8 [Source:HGNC Symbol;Acc:HGNC:16490]
81. GFPT1 ENSGALG00000036391 14025 0.854 - - - 0.854 - - - - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
82. PFKL ENSGALG00000006543 4361 0.853 - - - 0.853 - - - - - - Gallus gallus phosphofructokinase, liver type (PFKL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318442]
83. SLC39A9 ENSGALG00000009438 4838 0.852 - - - 0.852 - - - - - - solute carrier family 39 member 9 [Source:NCBI gene;Acc:423261]
84. DPY30 ENSGALG00000010621 6818 0.851 - - - 0.851 - - - - - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
85. PRDM4 ENSGALG00000012619 876 0.851 - - - 0.851 - - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
86. YARS ENSGALG00000003563 11093 0.85 - - - 0.850 - - - - - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
87. EIF3F ENSGALG00000005326 76059 0.849 - - - - - - 0.849 - - - eukaryotic translation initiation factor 3 subunit F
88. FKBP25 FKBP25 38434 0.849 - - - - - - 0.849 - - -
89. CBX3 ENSGALG00000011038 40977 0.848 - - - 0.848 - - - - - - chromobox 3 [Source:NCBI gene;Acc:395355]
90. ITGA9 ENSGALG00000029378 415 0.848 - - - 0.848 - - - - - - integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
91. HPS5 ENSGALG00000027716 2466 0.847 - - - 0.847 - - - - - - HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
92. IFT43 ENSGALG00000020415 1218 0.845 - - - 0.845 - - - - - - intraflagellar transport 43 [Source:HGNC Symbol;Acc:HGNC:29669]
93. MCCC2L ENSGALG00000011255 889 0.845 - - - 0.845 - - - - - - methylcrotonoyl-Coenzyme A carboxylase 2-like [Source:NCBI gene;Acc:429115]
94. NUDT4 ENSGALG00000011285 2998 0.845 - - - 0.845 - - - - - - nudix hydrolase 4, transcript variant X5
95. ITPKB ENSGALG00000009068 324 0.844 - - - 0.844 - - - - - - inositol-trisphosphate 3-kinase B [Source:HGNC Symbol;Acc:HGNC:6179]
96. SUMO1 ENSGALG00000008435 19847 0.844 - - - 0.844 - - - - - - small ubiquitin-like modifier 1 [Source:NCBI gene;Acc:373930]
97. LRRCC1 ENSGALG00000039499 480 0.843 - - - 0.843 - - - - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:HGNC Symbol;Acc:HGNC:29373]
98. UTP18 ENSGALG00000002985 7129 0.842 - - - 0.842 - - - - - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
99. HMHA1 HMHA1 929 0.841 - - - 0.841 - - - - - -
100. PASK ENSGALG00000006016 3096 0.841 - - - 0.841 - - - - - - PAS domain containing serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:17270]

There are 286 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA