Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PTRH2

Gene Name Gene ID Reads Annotation
PTRH2 ENSGALG00000005150 4756 peptidyl-tRNA hydrolase 2 [Source:NCBI gene;Acc:417634]











Genes with expression patterns similar to PTRH2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTRH2 ENSGALG00000005150 4756 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - peptidyl-tRNA hydrolase 2 [Source:NCBI gene;Acc:417634]
2. STX16 ENSGALG00000007541 6458 1.565 - - 0.742 - - - 0.823 - - - syntaxin 16 [Source:NCBI gene;Acc:419315]
3. SLC12A4 ENSGALG00000034179 5674 1.558 - - 0.799 - - - - 0.759 - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
4. SPCS1 ENSGALG00000001655 7718 1.557 - - - - - - 0.753 0.804 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
5. AGFG1 ENSGALG00000003052 4766 1.555 - - 0.809 - - - 0.746 - - - ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175]
6. GEMIN4 ENSGALG00000004817 3596 1.542 - - 0.808 - - - 0.734 - - - gem nuclear organelle associated protein 4 [Source:NCBI gene;Acc:427835]
7. URI1 ENSGALG00000004506 6024 1.539 - - 0.787 - - - 0.752 - - - URI1, prefoldin like chaperone [Source:HGNC Symbol;Acc:HGNC:13236]
8. PEMT ENSGALG00000004875 4094 1.539 - - 0.828 - - - - 0.711 - - phosphatidylethanolamine N-methyltransferase [Source:NCBI gene;Acc:416508]
9. PAPSS1 ENSGALG00000010542 5631 1.535 - - - - - - 0.766 0.769 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]
10. RNF214 ENSGALG00000036993 3729 1.528 - - 0.787 - - - 0.741 - - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
11. HINT3 ENSGALG00000044342 5674 1.527 - - 0.718 - - - - 0.809 - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
12. TMEM8A ENSGALG00000026188 3092 1.51 - - 0.747 - - - 0.763 - - - transmembrane protein 8A [Source:HGNC Symbol;Acc:HGNC:17205]
13. SNX14 ENSGALG00000015831 2554 1.508 - - 0.807 - - - - 0.701 - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
14. SLC41A1 ENSGALG00000000721 1604 1.486 - - 0.738 - - - 0.748 - - - solute carrier family 41 member 1 [Source:HGNC Symbol;Acc:HGNC:19429]
15. WDR3 ENSGALG00000014791 5856 1.479 - - 0.761 - - - - 0.718 - - WD repeat domain 3 [Source:NCBI gene;Acc:427952]
16. DDX42 ENSGALG00000000581 8780 1.478 - - 0.765 - - - - 0.713 - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
17. BZW2 ENSGALG00000010809 29213 1.464 - - 0.747 - - - - 0.717 - - basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
18. TRAF3IP1 ENSGALG00000004236 7094 1.464 - - 0.763 - - - - 0.701 - - TRAF3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:17861]
19. DARS2 ENSGALG00000023749 2386 1.438 - - 0.730 - - - 0.708 - - - aspartyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25538]
20. ACTR8 ENSGALG00000005385 3647 1.423 - - 0.718 - - - 0.705 - - - ARP8 actin related protein 8 homolog [Source:HGNC Symbol;Acc:HGNC:14672]
21. PSMD13 ENSGALG00000043684 14720 1.406 - - 0.702 - - - - 0.704 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
22. TLE1 ENSGALG00000012575 2047 0.868 - - 0.868 - - - - - - - transducin like enhancer of split 1 [Source:HGNC Symbol;Acc:HGNC:11837]
23. LMBRD1 ENSGALG00000016174 3469 0.863 - - - - - - - 0.863 - - LMBR1 domain containing 1 [Source:NCBI gene;Acc:421874]
24. NUDCD2 ENSGALG00000001726 6303 0.861 - - 0.861 - - - - - - - NudC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30535]
25. NUBP1 ENSGALG00000007241 3791 0.851 - - 0.851 - - - - - - - nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
26. NUMB ENSGALG00000009300 4220 0.85 - - - - - - - 0.850 - - NUMB, endocytic adaptor protein [Source:NCBI gene;Acc:395639]
27. LGALS1 ENSGALG00000012420 13993 0.85 - - 0.850 - - - - - - - galectin 1 [Source:NCBI gene;Acc:396491]
28. RAD1 ENSGALG00000003365 1417 0.849 - - 0.849 - - - - - - - RAD1 checkpoint DNA exonuclease [Source:HGNC Symbol;Acc:HGNC:9806]
29. NDUFB1 ENSGALG00000028537 2059 0.841 - - 0.841 - - - - - - - NADH:ubiquinone oxidoreductase subunit B1 [Source:NCBI gene;Acc:423415]
30. LPCAT3 ENSGALG00000014570 7919 0.838 - - 0.838 - - - - - - - lysophosphatidylcholine acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:30244]
31. SELK SELK 15022 0.837 - - 0.837 - - - - - - -
32. OVCA2 ENSGALG00000045371 2862 0.836 - - 0.836 - - - - - - - OVCA2, serine hydrolase domain containing [Source:HGNC Symbol;Acc:HGNC:24203]
33. SELM SELM 6366 0.833 - - 0.833 - - - - - - -
34. ATP6V0A2 ENSGALG00000003194 4824 0.832 - - 0.832 - - - - - - - ATPase H+ transporting V0 subunit a2 [Source:NCBI gene;Acc:395473]
35. CEP104 ENSGALG00000000978 1130 0.831 - - 0.831 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
36. MEF2BNB MEF2BNB 5578 0.831 - - - - - - 0.831 - - -
37. FAM134C 860 0.83 - - 0.830 - - - - - - - family with sequence similarity 134 member C
38. AMFR ENSGALG00000003107 6560 0.828 - - 0.828 - - - - - - - autocrine motility factor receptor [Source:HGNC Symbol;Acc:HGNC:463]
39. NCAPD2 ENSGALG00000039448 8658 0.828 - - 0.828 - - - - - - - non-SMC condensin I complex subunit D2 [Source:NCBI gene;Acc:418275]
40. SEPHS1 ENSGALG00000014575 10701 0.828 - - 0.828 - - - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
41. C2H6orf52 ENSGALG00000012721 3631 0.827 - - 0.827 - - - - - - - chromosome 2 C6orf52 homolog [Source:NCBI gene;Acc:420849]
42. GDPD4 ENSGALG00000000690 824 0.826 - - 0.826 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
43. TUBA4A ENSGALG00000000433 1367 0.826 - - 0.826 - - - - - - - tubulin alpha 4a
44. ATP6V1E1 ENSGALG00000013036 13497 0.826 - - 0.826 - - - - - - - ATPase H+ transporting V1 subunit E1 [Source:NCBI gene;Acc:418162]
45. PICK1 ENSGALG00000041823 3843 0.826 - - 0.826 - - - - - - - protein interacting with PRKCA 1 [Source:HGNC Symbol;Acc:HGNC:9394]
46. YBX3 ENSGALG00000031890 819 0.825 - - 0.825 - - - - - - - Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
47. TCTN2 ENSGALG00000023683 3596 0.825 - - 0.825 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
48. ZNF335 ENSGALG00000041370 4740 0.823 - - 0.823 - - - - - - - zinc finger protein 335 [Source:NCBI gene;Acc:396131]
49. PTDSS2 ENSGALG00000004300 682 0.822 - - 0.822 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
50. NXPE3 ENSGALG00000015344 111 0.821 - - 0.821 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
51. ITM2B ENSGALG00000016996 1112 0.821 - - 0.821 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
52. WDR92 ENSGALG00000008760 3934 0.821 - - 0.821 - - - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
53. ABCC3 ENSGALG00000007522 340 0.82 - - 0.820 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
54. RBBP8 ENSGALG00000014982 3255 0.82 - - 0.820 - - - - - - - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
55. TM4SF18 4553 0.82 - - - - - - - 0.820 - - transmembrane 4 L six family member 18, transcript variant X2
56. L3MBTL3 ENSGALG00000034030 113 0.819 - - 0.819 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
57. LRRC71 ENSGALG00000027351 695 0.819 - - 0.819 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
58. CAMSAP1 ENSGALG00000001692 2617 0.818 - - 0.818 - - - - - - - calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
59. TAF1D ENSGALG00000017220 3012 0.817 - - - - - - - 0.817 - - TATA-box binding protein associated factor, RNA polymerase I subunit D [Source:HGNC Symbol;Acc:HGNC:28759]
60. NUP205 ENSGALG00000011662 4157 0.817 - - - - - - - 0.817 - - nucleoporin 205
61. SZT2 ENSGALG00000028561 255 0.817 - - 0.817 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
62. ENSGALG00000020103 ENSGALG00000020103 64 0.816 - - 0.816 - - - - - - -
63. SLC3A1 ENSGALG00000009973 608 0.816 - - 0.816 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
64. MIB1 ENSGALG00000014974 3583 0.815 - - 0.815 - - - - - - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
65. UBR2 ENSGALG00000009906 7717 0.815 - - 0.815 - - - - - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
66. MRPS11 ENSGALG00000006777 16009 0.815 - - 0.815 - - - - - - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
67. CWC27 ENSGALG00000014747 8389 0.815 - - - - - - - 0.815 - - CWC27 spliceosome associated protein homolog [Source:HGNC Symbol;Acc:HGNC:10664]
68. LRRC42 ENSGALG00000010743 384 0.814 - - 0.814 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
69. CDC14B ENSGALG00000012627 110 0.813 - - 0.813 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
70. MED12 ENSGALG00000036322 814 0.813 - - 0.813 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
71. TRIM13 ENSGALG00000017011 92 0.813 - - 0.813 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
72. UEVLD ENSGALG00000006342 164 0.813 - - 0.813 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
73. RQCD1 RQCD1 110 0.813 - - 0.813 - - - - - - -
74. ENSGALG00000028964 ENSGALG00000028964 46 0.812 - - 0.812 - - - - - - -
75. SNRB SNRB 4477 0.812 - - 0.812 - - - - - - -
76. RECQL ENSGALG00000013174 1323 0.812 - - 0.812 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
77. MRC2 ENSGALG00000000461 48 0.812 - - 0.812 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
78. AKAP10 ENSGALG00000004679 103 0.812 - - 0.812 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
79. CHAMP1 ENSGALG00000016813 508 0.812 - - 0.812 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
80. ITGB4 ENSGALG00000002389 44 0.812 - - 0.812 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
81. TDRD6 48 0.812 - - 0.812 - - - - - - - tudor domain containing 6
82. ENSGALG00000002020 ENSGALG00000002020 183 0.812 - - 0.812 - - - - - - -
83. U4 U4 69 0.811 - - 0.811 - - - - - - -
84. ATP8B4 ENSGALG00000002326 456 0.811 - - 0.811 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
85. PCYOX1 ENSGALG00000013878 2200 0.811 - - 0.811 - - - - - - - prenylcysteine oxidase 1 [Source:HGNC Symbol;Acc:HGNC:20588]
86. SLC37A3 ENSGALG00000012849 836 0.811 - - 0.811 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
87. ENSGALG00000004703 ENSGALG00000004703 112 0.811 - - 0.811 - - - - - - -
88. AKTIP ENSGALG00000033378 1991 0.811 - - 0.811 - - - - - - - AKT interacting protein [Source:NCBI gene;Acc:415720]
89. ABCE1 ENSGALG00000009961 958 0.81 - - 0.810 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
90. RAD54L2 ENSGALG00000003243 187 0.81 - - 0.810 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
91. TXN2 ENSGALG00000012532 12518 0.81 - - 0.810 - - - - - - - thioredoxin 2 [Source:NCBI gene;Acc:426978]
92. CHGA ENSGALG00000010820 1028 0.81 - - 0.810 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
93. PRUNE PRUNE 452 0.81 - - 0.810 - - - - - - -
94. GTF2E1 ENSGALG00000042320 7712 0.809 - - 0.809 - - - - - - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
95. BBS5 ENSGALG00000009846 344 0.808 - - 0.808 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
96. CA9 ENSGALG00000021340 1431 0.808 - - 0.808 - - - - - - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
97. F2R ENSGALG00000014983 106 0.808 - - 0.808 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
98. PSMC3 ENSGALG00000008108 22922 0.808 - - - - - - 0.808 - - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
99. RPS6KB1 ENSGALG00000005198 169 0.807 - - 0.807 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
100. AASDHPPT ENSGALG00000027981 1017 0.807 - - 0.807 - - - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]

There are 511 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA