Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PTPRU

Gene Name Gene ID Reads Annotation
PTPRU ENSGALG00000031440 1357 protein tyrosine phosphatase, receptor type U [Source:NCBI gene;Acc:395153]











Genes with expression patterns similar to PTPRU

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTPRU ENSGALG00000031440 1357 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein tyrosine phosphatase, receptor type U [Source:NCBI gene;Acc:395153]
2. ANO1 ENSGALG00000041808 5149 0.965 - - - - - - - - 0.965 - anoctamin 1 [Source:HGNC Symbol;Acc:HGNC:21625]
3. EIF3E ENSGALG00000037067 36561 0.922 - - - - - - - - 0.922 - eukaryotic translation initiation factor 3 subunit E [Source:NCBI gene;Acc:420272]
4. TRPC4 ENSGALG00000017044 300 0.918 - - - - - - - - 0.918 - transient receptor potential cation channel subfamily C member 4 [Source:HGNC Symbol;Acc:HGNC:12336]
5. G6PC2 ENSGALG00000010899 260 0.895 - - - - - - - - 0.895 - glucose-6-phosphatase catalytic subunit 2 [Source:HGNC Symbol;Acc:HGNC:28906]
6. FGF12 ENSGALG00000036971 2631 0.886 - - - - - - - - 0.886 - fibroblast growth factor 12 [Source:NCBI gene;Acc:395704]
7. RBM45 ENSGALG00000009202 6057 0.883 - - - - - - - - 0.883 - RNA binding motif protein 45 [Source:NCBI gene;Acc:424132]
8. PRPS2 ENSGALG00000016592 165 0.875 - - - - - - - - 0.875 - phosphoribosyl pyrophosphate synthetase 2 [Source:NCBI gene;Acc:418639]
9. ASH1L ENSGALG00000014638 803 0.869 - - - - - - - - 0.869 - ASH1 like histone lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:19088]
10. HDX ENSGALG00000007041 179 0.866 - - - - - - - - 0.866 - highly divergent homeobox [Source:NCBI gene;Acc:422272]
11. HAND1 ENSGALG00000035104 2351 0.863 - - - - - - - - 0.863 - heart and neural crest derivatives expressed 1 [Source:NCBI gene;Acc:395812]
12. RAP1A ENSGALG00000001476 5287 0.862 - - - - - - - - 0.862 - RAP1A, member of RAS oncogene family
13. OSBPL11 ENSGALG00000012059 2523 0.856 - - - - - - - - 0.856 - oxysterol binding protein like 11 [Source:HGNC Symbol;Acc:HGNC:16397]
14. DACT1 ENSGALG00000012023 1008 0.855 - - - - - - - - 0.855 - dishevelled binding antagonist of beta catenin 1 [Source:NCBI gene;Acc:723789]
15. XKR6 ENSGALG00000016646 326 0.852 - - - - - - - - 0.852 - XK related 6 [Source:HGNC Symbol;Acc:HGNC:27806]
16. TPP1 52 0.851 - - - - - - - - 0.851 - tripeptidyl peptidase 1
17. RIF1 ENSGALG00000012484 2248 0.845 - - - - - - - - 0.845 - replication timing regulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:23207]
18. ENSGALG00000021611 ENSGALG00000021611 1551 0.842 - - - - - - - - 0.842 -
19. GPR125 GPR125 2753 0.84 - - - - - - - - 0.840 -
20. SETX ENSGALG00000003661 701 0.84 - - - - - - - - 0.840 - senataxin [Source:HGNC Symbol;Acc:HGNC:445]
21. CIDEC ENSGALG00000026945 718 0.839 - - - - - - - - 0.839 - cell death inducing DFFA like effector c [Source:NCBI gene;Acc:100859733]
22. APP ENSGALG00000015770 9438 0.837 - - - - - - - - 0.837 - amyloid beta (A4) precursor protein [Source:NCBI gene;Acc:374198]
23. SNRK ENSGALG00000039920 174 0.836 - - - - - - - - 0.836 - SNF related kinase [Source:NCBI gene;Acc:420675]
24. VIPAS39 ENSGALG00000010459 2090 0.829 - - - - - - - - 0.829 - VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [Source:HGNC Symbol;Acc:HGNC:20347]
25. MT-ND4L MT-ND4L 12537 0.829 - - - - - - - - 0.829 -
26. RNF207 2949 0.826 - - - - - - - - 0.826 - ring finger protein 207, transcript variant X1
27. DNAJB14 ENSGALG00000014026 598 0.823 - - - - - - - - 0.823 - DnaJ heat shock protein family (Hsp40) member B14 [Source:NCBI gene;Acc:426362]
28. FMR1 ENSGALG00000009177 561 0.819 - - - - - - - - 0.819 - fragile X mental retardation 1 [Source:HGNC Symbol;Acc:HGNC:3775]
29. KCNJ11 ENSGALG00000020505 196 0.816 - - - - - - - - 0.816 - potassium voltage-gated channel subfamily J member 11 [Source:HGNC Symbol;Acc:HGNC:6257]
30. PSMD6 ENSGALG00000007315 3906 0.812 - - - - - - - - 0.812 - proteasome 26S subunit, non-ATPase 6 [Source:HGNC Symbol;Acc:HGNC:9564]
31. SNX7 ENSGALG00000005478 4736 0.812 - - - - - - - - 0.812 - sorting nexin 7 [Source:HGNC Symbol;Acc:HGNC:14971]
32. IFT81 ENSGALG00000003854 2534 0.81 - - - - - - - - 0.810 - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
33. AIDA ENSGALG00000009426 219 0.81 - - - - - - - - 0.810 - axin interactor, dorsalization associated [Source:NCBI gene;Acc:421335]
34. KIAA0232 ENSGALG00000015538 717 0.81 - - - - - - - - 0.810 - KIAA0232 [Source:HGNC Symbol;Acc:HGNC:28992]
35. ELP3 ENSGALG00000016624 4483 0.809 - - - - - - - - 0.809 - elongator acetyltransferase complex subunit 3 [Source:NCBI gene;Acc:422021]
36. RBMS1 ENSGALG00000011132 569 0.809 - - - - - - - - 0.809 - RNA binding motif single stranded interacting protein 1 [Source:NCBI gene;Acc:395880]
37. IBTK ENSGALG00000015864 3154 0.809 - - - - - - - - 0.809 - inhibitor of Bruton tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:17853]
38. TMEM169 ENSGALG00000011493 1238 0.808 - - - - - - - - 0.808 - transmembrane protein 169 [Source:HGNC Symbol;Acc:HGNC:25130]
39. LIMS1 ENSGALG00000029970 7244 0.805 - - - - - - - - 0.805 - LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:414880]
40. IFT27 ENSGALG00000042990 221 0.804 - - - - - - - - 0.804 - intraflagellar transport 27 [Source:NCBI gene;Acc:418053]
41. ANKIB1 ENSGALG00000031917 109 0.803 - - - - - - - - 0.803 - ankyrin repeat and IBR domain containing 1 [Source:HGNC Symbol;Acc:HGNC:22215]
42. HSP70 HSP70 986 0.8 - - - - - - - - 0.800 -
43. EPHB3 ENSGALG00000008537 1843 0.797 - - - - - - - - 0.797 - EPH receptor B3 [Source:HGNC Symbol;Acc:HGNC:3394]
44. PTPLAD1 PTPLAD1 292 0.797 - - - - - - - - 0.797 -
45. IVD ENSGALG00000040267 5820 0.795 - - - - - - - - 0.795 - isovaleryl-CoA dehydrogenase [Source:NCBI gene;Acc:423011]
46. CSPP1 1756 0.795 - - - - - - - - 0.795 - centrosome and spindle pole associated protein 1
47. VPS51 ENSGALG00000004166 204 0.794 - - - - - - - - 0.794 - VPS51, GARP complex subunit [Source:NCBI gene;Acc:422984]
48. BTK ENSGALG00000004958 272 0.793 - - - - - - - - 0.793 - Bruton tyrosine kinase [Source:NCBI gene;Acc:374075]
49. SGCE ENSGALG00000009670 3070 0.792 - - - - - - - - 0.792 - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
50. GATA5 ENSGALG00000005352 11876 0.791 - - - - - - - - 0.791 - GATA binding protein 5 [Source:NCBI gene;Acc:396391]
51. SFMBT2 ENSGALG00000009279 125 0.787 - - - - - - - - 0.787 - Scm like with four mbt domains 2 [Source:HGNC Symbol;Acc:HGNC:20256]
52. GPR180 ENSGALG00000016897 1545 0.787 - - - - - - - - 0.787 - G protein-coupled receptor 180 [Source:HGNC Symbol;Acc:HGNC:28899]
53. C3H20ORF94 C3H20ORF94 414 0.786 - - - - - - - - 0.786 -
54. MDGA2 ENSGALG00000012228 174 0.783 - - - - - - - - 0.783 - MAM domain containing glycosylphosphatidylinositol anchor 2 [Source:HGNC Symbol;Acc:HGNC:19835]
55. VCPIP1 ENSGALG00000042883 139 0.782 - - - - - - - - 0.782 - valosin containing protein interacting protein 1 [Source:NCBI gene;Acc:428359]
56. NIF3L1 ENSGALG00000008226 1500 0.78 - - - - - - - - 0.780 - NGG1 interacting factor 3 like 1 [Source:HGNC Symbol;Acc:HGNC:13390]
57. GSTCD ENSGALG00000010573 1409 0.779 - - - - - - - - 0.779 - glutathione S-transferase C-terminal domain containing [Source:HGNC Symbol;Acc:HGNC:25806]
58. GALNT14 ENSGALG00000009078 126 0.779 - - - - - - - - 0.779 - polypeptide N-acetylgalactosaminyltransferase 14 [Source:HGNC Symbol;Acc:HGNC:22946]
59. CBX1 ENSGALG00000033926 2436 0.778 - - - - - - - - 0.778 - chromobox 1 [Source:NCBI gene;Acc:374237]
60. NSA2 ENSGALG00000014942 45193 0.775 - - - - - - - - 0.775 - NSA2, ribosome biogenesis homolog [Source:NCBI gene;Acc:427206]
61. PRDM4 ENSGALG00000012619 876 0.774 - - - - - - - - 0.774 - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
62. NCOA2 ENSGALG00000036017 256 0.774 - - - - - - - - 0.774 - nuclear receptor coactivator 2, transcript variant X9
63. RNF152 ENSGALG00000028822 291 0.773 - - - - - - - - 0.773 - ring finger protein 152 [Source:NCBI gene;Acc:420909]
64. MBTPS1 ENSGALG00000003293 4843 0.771 - - - - - - - - 0.771 - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
65. FREM3 ENSGALG00000020561 1824 0.771 - - - - - - - - 0.771 - FRAS1 related extracellular matrix 3
66. SSBP1 ENSGALG00000012876 34256 0.771 - - - - - - - - 0.771 - single stranded DNA binding protein 1 [Source:NCBI gene;Acc:418122]
67. MED13 ENSGALG00000005230 1504 0.771 - - - - - - - - 0.771 - mediator complex subunit 13 [Source:HGNC Symbol;Acc:HGNC:22474]
68. ZMYM2 ENSGALG00000017139 3747 0.769 - - - - - - - - 0.769 - zinc finger MYM-type containing 2, transcript variant X10
69. ZNF341 ENSGALG00000002968 1028 0.768 - - - - - - - - 0.768 - zinc finger protein 341 [Source:NCBI gene;Acc:419152]
70. EYA4 ENSGALG00000031656 463 0.768 - - - - - - - - 0.768 - EYA transcriptional coactivator and phosphatase 4 [Source:NCBI gene;Acc:395716]
71. HP1BP3 ENSGALG00000010079 33723 0.768 - - - - - - - - 0.768 - heterochromatin protein 1 binding protein 3 [Source:NCBI gene;Acc:425543]
72. VPRBP VPRBP 4037 0.767 - - - - - - - - 0.767 -
73. ABCC10 2213 0.767 - - - - - - - - 0.767 - ATP binding cassette subfamily C member 10, transcript variant X10
74. LACE1 LACE1 74 0.767 - - - - - - - - 0.767 -
75. SRRD ENSGALG00000005614 234 0.765 - - - - - - - - 0.765 - SRR1 domain containing [Source:NCBI gene;Acc:416908]
76. ENOX2 ENSGALG00000004079 4055 0.765 - - - - - - - - 0.765 - ecto-NOX disulfide-thiol exchanger 2 [Source:NCBI gene;Acc:422142]
77. CLK4 ENSGALG00000006057 2306 0.762 - - - - - - - - 0.762 - CDC like kinase 4 [Source:HGNC Symbol;Acc:HGNC:13659]
78. CUL1 ENSGALG00000036941 317 0.761 - - - - - - - - 0.761 - cullin 1 [Source:HGNC Symbol;Acc:HGNC:2551]
79. KIAA0408 ENSGALG00000030211 934 0.756 - - - - - - - - 0.756 - KIAA0408 [Source:HGNC Symbol;Acc:HGNC:21636]
80. SDR42E1 ENSGALG00000005456 586 0.756 - - - - - - - - 0.756 - short chain dehydrogenase/reductase family 42E, member 1 [Source:HGNC Symbol;Acc:HGNC:29834]
81. ABHD17B ENSGALG00000015139 2805 0.755 - - - - - - - - 0.755 - abhydrolase domain containing 17B [Source:NCBI gene;Acc:427252]
82. METTL20 METTL20 2566 0.755 - - - - - - - - 0.755 -
83. UBXN2A ENSGALG00000016497 2444 0.754 - - - - - - - - 0.754 - UBX domain protein 2A [Source:NCBI gene;Acc:421973]
84. UNKL ENSGALG00000030069, ENSGALG00000043765 792 0.753 - - - - - - - - 0.753 - unkempt family like zinc finger, transcript variant X5
85. FAM188B 2097 0.752 - - - - - - - - 0.752 - family with sequence similarity 188 member B
86. ENSGALG00000011687 ENSGALG00000011687 4553 0.75 - - - - - - - - 0.750 -
87. COL14A1 ENSGALG00000037675 2652 0.75 - - - - - 0.750 - - - - collagen type XIV alpha 1 chain [Source:NCBI gene;Acc:396276]
88. PLEKHH2 ENSGALG00000009947 6384 0.749 - - - - - - - - 0.749 - pleckstrin homology, MyTH4 and FERM domain containing H2 [Source:HGNC Symbol;Acc:HGNC:30506]
89. C14orf79 C14orf79 401 0.748 - - - - - - - - 0.748 -
90. HKDC1 ENSGALG00000021039 134 0.748 - - - - - - - - 0.748 - hexokinase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23302]
91. HS1BP3 ENSGALG00000016486 380 0.747 - - - - - - - - 0.747 - HCLS1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:24979]
92. IARS ENSGALG00000004813 12936 0.747 - - - - - - - - 0.747 - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]
93. C5orf34 C5orf34 298 0.746 - - - - - - 0.746 - - -
94. HMGXB3 ENSGALG00000005770 119 0.746 - - - - - - - - 0.746 - HMG-box containing 3 [Source:HGNC Symbol;Acc:HGNC:28982]
95. AGFG1 ENSGALG00000003052 4766 0.746 - - - - - - - - 0.746 - ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175]
96. PLCB1 ENSGALG00000008875 334 0.745 - - - - - - - - 0.745 - phospholipase C beta 1 [Source:HGNC Symbol;Acc:HGNC:15917]
97. XPO1 ENSGALG00000029476 9526 0.745 - - - - - - - - 0.745 - exportin 1 [Source:NCBI gene;Acc:421192]
98. KIAA1109 833 0.745 - - - - - - - - 0.745 - KIAA1109, transcript variant X11
99. NEIL1 ENSGALG00000001586 2292 0.745 - - - - - - - - 0.745 - nei like DNA glycosylase 1 [Source:NCBI gene;Acc:770068]
100. TOPBP1 ENSGALG00000034461 3094 0.744 - - - - - - - - 0.744 - DNA topoisomerase II binding protein 1 [Source:HGNC Symbol;Acc:HGNC:17008]

There are 69 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA