Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PTPRR

Gene Name Gene ID Reads Annotation
PTPRR ENSGALG00000010148 93 protein tyrosine phosphatase, receptor type R, transcript variant X4











Genes with expression patterns similar to PTPRR

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTPRR ENSGALG00000010148 93 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 protein tyrosine phosphatase, receptor type R, transcript variant X4
2. ENSGALG00000019793 ENSGALG00000019793 198 0.983 - - - - - - - 0.983 - -
3. NRG3 ENSGALG00000042812 10 0.952 - - - - - - - 0.952 - - neuregulin 3 [Source:HGNC Symbol;Acc:HGNC:7999]
4. GUCY1B3 29 0.952 - - - - - - - 0.952 - - guanylate cyclase 1 soluble subunit beta, transcript variant X2
5. ADPRH ENSGALG00000015473 7 0.952 - - - - - - - 0.952 - - ADP-ribosylarginine hydrolase [Source:NCBI gene;Acc:418452]
6. ENSGALG00000014888 ENSGALG00000014888 3 0.952 - - - - - - - 0.952 - -
7. RUNX1 ENSGALG00000016022 2 0.952 - - - - - - - 0.952 - - runt-related transcription factor 1 [Source:NCBI gene;Acc:396152]
8. TTC29 ENSGALG00000010009 4 0.952 - - - - - - - 0.952 - - tetratricopeptide repeat domain 29 [Source:HGNC Symbol;Acc:HGNC:29936]
9. DENND2A ENSGALG00000012857 350 0.952 - - - - - - - 0.952 - - DENN domain containing 2A [Source:HGNC Symbol;Acc:HGNC:22212]
10. ENSGALG00000027203 ENSGALG00000027203 2 0.952 - - - - - - - 0.952 - -
11. FRMPD3 ENSGALG00000028975 3 0.952 - - - - - - - 0.952 - - FERM and PDZ domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29382]
12. PGF ENSGALG00000026557 33 0.952 - - - - - - - 0.952 - - placental growth factor [Source:HGNC Symbol;Acc:HGNC:8893]
13. PACRG ENSGALG00000011560 67 0.952 - - - - - - - 0.952 - - parkin coregulated [Source:HGNC Symbol;Acc:HGNC:19152]
14. POMGNT1 ENSGALG00000010351 3 0.952 - - - - - - - 0.952 - - protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:HGNC Symbol;Acc:HGNC:19139]
15. TSPAN10 ENSGALG00000004525 6 0.951 - - - - - - - 0.951 - - tetraspanin 10 [Source:HGNC Symbol;Acc:HGNC:29942]
16. BDKRB2 ENSGALG00000011080 12 0.948 - - - - - - - 0.948 - - bradykinin receptor B2 [Source:NCBI gene;Acc:428906]
17. ZFYVE20 ZFYVE20 132 0.948 - - - - - - - 0.948 - -
18. NRROS 72 0.942 - - - - - - - 0.942 - - negative regulator of reactive oxygen species, transcript variant X2
19. SERGEF ENSGALG00000006231 35 0.939 - - - - - - - 0.939 - - secretion regulating guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:17499]
20. EXOC6 ENSGALG00000006763 119 0.936 - - - - - - - 0.936 - - exocyst complex component 6 [Source:NCBI gene;Acc:423807]
21. C12orf50 ENSGALG00000045093 9 0.932 - - - - - - - 0.932 - - chromosome 12 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26665]
22. SS2 ENSGALG00000003034 277 0.931 - - - - - - - 0.931 - - somatostatin II [Source:NCBI gene;Acc:395106]
23. IGFBP2 ENSGALG00000011469 26 0.922 - - - - - - - 0.922 - - insulin like growth factor binding protein 2 [Source:NCBI gene;Acc:396315]
24. SCUBE3 ENSGALG00000002675 12 0.922 - - - - - - - 0.922 - - signal peptide, CUB domain and EGF like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:13655]
25. TTC25 ENSGALG00000003464 70 0.922 - - - - - - - 0.922 - - tetratricopeptide repeat domain 25
26. ENSGALG00000008594 ENSGALG00000008594 54 0.922 - - - - - - - 0.922 - -
27. BAI1 BAI1 235 0.922 - - - - - - - 0.922 - -
28. UBAP1 ENSGALG00000021378 11 0.918 - - - - - - - 0.918 - - ubiquitin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:12461]
29. KIF5C ENSGALG00000012462 167 0.914 - - - - - - - 0.914 - - kinesin family member 5C [Source:NCBI gene;Acc:408046]
30. CCNA1 ENSGALG00000017052 23 0.904 - - - - - - - 0.904 - - cyclin A1 [Source:HGNC Symbol;Acc:HGNC:1577]
31. GRIA2 ENSGALG00000009405 275 0.903 - - - - - - - 0.903 - - glutamate ionotropic receptor AMPA type subunit 2 [Source:NCBI gene;Acc:414894]
32. C9orf96 C9orf96 43 0.884 - - - - - - - 0.884 - -
33. ENSGALG00000011906 ENSGALG00000011906 181 0.881 - - - - - - - 0.881 - -
34. TCP11 ENSGALG00000002692 11 0.879 - - - - - - - 0.879 - - t-complex 11, transcript variant X3
35. ENSGALG00000000193 ENSGALG00000000193 19 0.878 - - - - - - - 0.878 - -
36. FN3K ENSGALG00000001531 208 0.872 - - - - - - - 0.872 - - fructosamine 3 kinase [Source:HGNC Symbol;Acc:HGNC:24822]
37. P2RY12 ENSGALG00000036470 20 0.871 - - - - - - - 0.871 - - purinergic receptor P2Y12 [Source:HGNC Symbol;Acc:HGNC:18124]
38. PTGES ENSGALG00000038013 77 0.867 - - - - - 0.867 - - - - prostaglandin E synthase [Source:NCBI gene;Acc:417193]
39. WDR19 ENSGALG00000014064 49 0.863 - - - - - - - 0.863 - - WD repeat domain 19 [Source:HGNC Symbol;Acc:HGNC:18340]
40. CELA3B ENSGALG00000027189 32 0.858 - - - - - - - 0.858 - - chymotrypsin like elastase family member 3B
41. LRRK2 ENSGALG00000007161 66 0.856 - - - - - - - 0.856 - - leucine rich repeat kinase 2 [Source:NCBI gene;Acc:427844]
42. EPHX1 ENSGALG00000009291 46 0.852 - - - - - - - 0.852 - - epoxide hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:3401]
43. FYCO1 ENSGALG00000040212 75 0.852 - - - - - 0.852 - - - - FYVE and coiled-coil domain containing 1 [Source:NCBI gene;Acc:428453]
44. TSC2 ENSGALG00000005646 489 0.844 - - - - - - - 0.844 - - TSC complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:12363]
45. LOC428714 ENSGALG00000007530 41 0.841 - - - - - - - 0.841 - - LOC428714, transcript variant X2
46. PDCL ENSGALG00000001275 24 0.841 - - - - - 0.841 - - - - phosducin like [Source:HGNC Symbol;Acc:HGNC:8770]
47. PARP3 ENSGALG00000004517 331 0.84 - - - - - 0.840 - - - - poly(ADP-ribose) polymerase family member 3 [Source:HGNC Symbol;Acc:HGNC:273]
48. AK4 ENSGALG00000011035 9 0.837 - - - - - 0.837 - - - - adenylate kinase 4 [Source:HGNC Symbol;Acc:HGNC:363]
49. STRA8 ENSGALG00000011722 4 0.837 - - - - - 0.837 - - - - stimulated by retinoic acid 8 [Source:HGNC Symbol;Acc:HGNC:30653]
50. MNOC MNOC 1 0.837 - - - - - 0.837 - - - -
51. TMEM189 ENSGALG00000026906 14 0.837 - - - - - 0.837 - - - - transmembrane protein 189 [Source:NCBI gene;Acc:100538348]
52. NME4 ENSGALG00000002688 1 0.837 - - - - - 0.837 - - - - NME/NM23 nucleoside diphosphate kinase 4 [Source:NCBI gene;Acc:395915]
53. LDB1 ENSGALG00000007641 2 0.837 - - - - - 0.837 - - - - LIM domain binding 1 [Source:NCBI gene;Acc:395952]
54. KATNAL2 ENSGALG00000041882 1 0.837 - - - - - 0.837 - - - - katanin catalytic subunit A1 like 2 [Source:HGNC Symbol;Acc:HGNC:25387]
55. PPM1F ENSGALG00000039121 26 0.837 - - - - - 0.837 - - - - protein phosphatase, Mg2+/Mn2+ dependent 1F [Source:HGNC Symbol;Acc:HGNC:19388]
56. WDR41 ENSGALG00000004350 16 0.837 - - - - - 0.837 - - - - WD repeat domain 41 [Source:HGNC Symbol;Acc:HGNC:25601]
57. WFDC2 ENSGALG00000031164 37 0.837 - - - - - 0.837 - - - - WAP four-disulfide core domain 2 [Source:HGNC Symbol;Acc:HGNC:15939]
58. RNF217 ENSGALG00000013651 1 0.837 - - - - - 0.837 - - - - ring finger protein 217 [Source:HGNC Symbol;Acc:HGNC:21487]
59. PABPN1L ENSGALG00000006242 3 0.837 - - - - - 0.837 - - - - poly(A) binding protein nuclear 1 like, cytoplasmic [Source:HGNC Symbol;Acc:HGNC:37237]
60. C17orf105 C17orf105 11 0.837 - - - - - 0.837 - - - -
61. SOD3 ENSGALG00000018557 16 0.837 - - - - - 0.837 - - - - superoxide dismutase 3 [Source:HGNC Symbol;Acc:HGNC:11181]
62. FKHR FKHR 1 0.837 - - - - - 0.837 - - - -
63. GAMT ENSGALG00000040182 5 0.837 - - - - - 0.837 - - - - guanidinoacetate N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4136]
64. gga-mir-10a ENSGALG00000021952 4 0.837 - - - - - 0.837 - - - - gga-mir-10a [Source:miRBase;Acc:MI0007559]
65. AATK ENSGALG00000006901 1 0.837 - - - - - 0.837 - - - - apoptosis associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:21]
66. ERI3 ENSGALG00000010106 995 0.837 - - - - - 0.837 - - - - ERI1 exoribonuclease family member 3 [Source:HGNC Symbol;Acc:HGNC:17276]
67. TRIM25 ENSGALG00000003144 12 0.837 - - - - - 0.837 - - - - Gallus gallus tripartite motif containing 25 (TRIM25), mRNA. [Source:RefSeq mRNA;Acc:NM_001318458]
68. TBX15 0 0.837 - - - - - 0.837 - - - - T-box 15
69. MFSD11 ENSGALG00000001777 8 0.837 - - - - - 0.837 - - - - major facilitator superfamily domain containing 11 [Source:HGNC Symbol;Acc:HGNC:25458]
70. SLC26A6 ENSGALG00000026089 3 0.837 - - - - - 0.837 - - - - solute carrier family 26 member 6 [Source:NCBI gene;Acc:416012]
71. ENPP4 ENSGALG00000016708 18 0.837 - - - - - 0.837 - - - - ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:NCBI gene;Acc:422055]
72. MAVS ENSGALG00000040428 1 0.837 - - - - - 0.837 - - - - mitochondrial antiviral signaling protein [Source:NCBI gene;Acc:422936]
73. ENSGALG00000013409 ENSGALG00000013409 4 0.837 - - - - - 0.837 - - - -
74. DSCAML1 ENSGALG00000007314 1 0.837 - - - - - 0.837 - - - - DS cell adhesion molecule like 1 [Source:HGNC Symbol;Acc:HGNC:14656]
75. LPP ENSGALG00000007337 18 0.837 - - - - - 0.837 - - - - LIM domain containing preferred translocation partner in lipoma [Source:NCBI gene;Acc:429148]
76. OVST_1 ENSGALG00000011930 9 0.837 - - - - - 0.837 - - - - ovostatin [Source:NCBI gene;Acc:396151]
77. gga-mir-301a ENSGALG00000029989 5 0.837 - - - - - 0.837 - - - - gga-mir-301a [Source:miRBase;Acc:MI0001240]
78. AGRP ENSGALG00000002244 27 0.837 - - - - - 0.837 - - - - agouti related neuropeptide [Source:NCBI gene;Acc:427535]
79. SNORA24 SNORA24 2 0.837 - - - - - 0.837 - - - -
80. BAFF BAFF 40 0.837 - - - - - 0.837 - - - -
81. HID1 ENSGALG00000007808 2 0.837 - - - - - 0.837 - - - - HID1 domain containing [Source:HGNC Symbol;Acc:HGNC:15736]
82. FARP2 ENSGALG00000005788 6 0.837 - - - - - 0.837 - - - - FERM, ARH/RhoGEF and pleckstrin domain protein 2 [Source:HGNC Symbol;Acc:HGNC:16460]
83. ENSGALG00000028116 ENSGALG00000028116 0 0.837 - - - - - 0.837 - - - -
84. GTF3C3 ENSGALG00000007958 6 0.837 - - - - - 0.837 - - - - general transcription factor IIIC subunit 3 [Source:NCBI gene;Acc:424052]
85. CORO6 ENSGALG00000028949 21 0.837 - - - - - 0.837 - - - - coronin 6 [Source:HGNC Symbol;Acc:HGNC:21356]
86. MAGI1 ENSGALG00000007431 23 0.837 - - - - - 0.837 - - - - membrane associated guanylate kinase, WW and PDZ domain containing 1 [Source:HGNC Symbol;Acc:HGNC:946]
87. RPS6KA2 ENSGALG00000011473 2 0.837 - - - - - 0.837 - - - - ribosomal protein S6 kinase A2 [Source:HGNC Symbol;Acc:HGNC:10431]
88. CBL ENSGALG00000029077 6 0.837 - - - - - 0.837 - - - - Cbl proto-oncogene [Source:NCBI gene;Acc:374038]
89. DNMBP ENSGALG00000007304 4 0.837 - - - - - 0.837 - - - - dynamin binding protein
90. VPS37D 3 0.837 - - - - - 0.837 - - - - VPS37D, ESCRT-I subunit
91. MINPP1 ENSGALG00000003695 1 0.837 - - - - - 0.837 - - - - multiple inositol-polyphosphate phosphatase 1 [Source:NCBI gene;Acc:395356]
92. CARF ENSGALG00000008474 6 0.837 - - - - - 0.837 - - - - calcium responsive transcription factor [Source:HGNC Symbol;Acc:HGNC:14435]
93. SP-A SP-A 9 0.837 - - - - - 0.837 - - - -
94. ENSGALG00000021682 ENSGALG00000021682 0 0.837 - - - - - 0.837 - - - -
95. PSTPIP1 ENSGALG00000002786 9 0.837 - - - - - 0.837 - - - - proline-serine-threonine phosphatase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9580]
96. STX3 ENSGALG00000035153 1 0.837 - - - - - 0.837 - - - - syntaxin 3
97. VSTM2A ENSGALG00000041764 2 0.837 - - - - - 0.837 - - - - V-set and transmembrane domain containing 2A [Source:HGNC Symbol;Acc:HGNC:28499]
98. ZNRF2 ENSGALG00000031163 0 0.837 - - - - - 0.837 - - - - zinc and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:22316]
99. PLD5 ENSGALG00000010737 5 0.837 - - - - - 0.837 - - - - phospholipase D family member 5 [Source:NCBI gene;Acc:421501]
100. PPP1R1B ENSGALG00000044406 6 0.837 - - - - - 0.837 - - - - protein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]

There are 103 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA