Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PTPRR

Gene Name Gene ID Reads Annotation
PTPRR ENSGALG00000010148 93 protein tyrosine phosphatase, receptor type R, transcript variant X4











Genes with expression patterns similar to PTPRR

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTPRR ENSGALG00000010148 93 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 protein tyrosine phosphatase, receptor type R, transcript variant X4
2. ENSGALG00000019793 ENSGALG00000019793 198 0.983 - - - - - - - 0.983 - -
3. POMGNT1 ENSGALG00000010351 3 0.952 - - - - - - - 0.952 - - protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:HGNC Symbol;Acc:HGNC:19139]
4. PACRG ENSGALG00000011560 67 0.952 - - - - - - - 0.952 - - parkin coregulated [Source:HGNC Symbol;Acc:HGNC:19152]
5. PGF ENSGALG00000026557 33 0.952 - - - - - - - 0.952 - - placental growth factor [Source:HGNC Symbol;Acc:HGNC:8893]
6. FRMPD3 ENSGALG00000028975 3 0.952 - - - - - - - 0.952 - - FERM and PDZ domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29382]
7. DENND2A ENSGALG00000012857 350 0.952 - - - - - - - 0.952 - - DENN domain containing 2A [Source:HGNC Symbol;Acc:HGNC:22212]
8. ENSGALG00000027203 ENSGALG00000027203 2 0.952 - - - - - - - 0.952 - -
9. TTC29 ENSGALG00000010009 4 0.952 - - - - - - - 0.952 - - tetratricopeptide repeat domain 29 [Source:HGNC Symbol;Acc:HGNC:29936]
10. RUNX1 ENSGALG00000016022 2 0.952 - - - - - - - 0.952 - - runt-related transcription factor 1 [Source:NCBI gene;Acc:396152]
11. ENSGALG00000014888 ENSGALG00000014888 3 0.952 - - - - - - - 0.952 - -
12. ADPRH ENSGALG00000015473 7 0.952 - - - - - - - 0.952 - - ADP-ribosylarginine hydrolase [Source:NCBI gene;Acc:418452]
13. NRG3 ENSGALG00000042812 10 0.952 - - - - - - - 0.952 - - neuregulin 3 [Source:HGNC Symbol;Acc:HGNC:7999]
14. GUCY1B3 29 0.952 - - - - - - - 0.952 - - guanylate cyclase 1 soluble subunit beta, transcript variant X2
15. TSPAN10 ENSGALG00000004525 6 0.951 - - - - - - - 0.951 - - tetraspanin 10 [Source:HGNC Symbol;Acc:HGNC:29942]
16. ZFYVE20 ZFYVE20 132 0.948 - - - - - - - 0.948 - -
17. BDKRB2 ENSGALG00000011080 12 0.948 - - - - - - - 0.948 - - bradykinin receptor B2 [Source:NCBI gene;Acc:428906]
18. NRROS 72 0.942 - - - - - - - 0.942 - - negative regulator of reactive oxygen species, transcript variant X2
19. SERGEF ENSGALG00000006231 35 0.939 - - - - - - - 0.939 - - secretion regulating guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:17499]
20. EXOC6 ENSGALG00000006763 119 0.936 - - - - - - - 0.936 - - exocyst complex component 6 [Source:NCBI gene;Acc:423807]
21. C12orf50 ENSGALG00000045093 9 0.932 - - - - - - - 0.932 - - chromosome 12 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26665]
22. SS2 ENSGALG00000003034 277 0.931 - - - - - - - 0.931 - - somatostatin II [Source:NCBI gene;Acc:395106]
23. BAI1 BAI1 235 0.922 - - - - - - - 0.922 - -
24. ENSGALG00000008594 ENSGALG00000008594 54 0.922 - - - - - - - 0.922 - -
25. TTC25 ENSGALG00000003464 70 0.922 - - - - - - - 0.922 - - tetratricopeptide repeat domain 25
26. SCUBE3 ENSGALG00000002675 12 0.922 - - - - - - - 0.922 - - signal peptide, CUB domain and EGF like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:13655]
27. IGFBP2 ENSGALG00000011469 26 0.922 - - - - - - - 0.922 - - insulin like growth factor binding protein 2 [Source:NCBI gene;Acc:396315]
28. UBAP1 ENSGALG00000021378 11 0.918 - - - - - - - 0.918 - - ubiquitin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:12461]
29. KIF5C ENSGALG00000012462 167 0.914 - - - - - - - 0.914 - - kinesin family member 5C [Source:NCBI gene;Acc:408046]
30. CCNA1 ENSGALG00000017052 23 0.904 - - - - - - - 0.904 - - cyclin A1 [Source:HGNC Symbol;Acc:HGNC:1577]
31. GRIA2 ENSGALG00000009405 275 0.903 - - - - - - - 0.903 - - glutamate ionotropic receptor AMPA type subunit 2 [Source:NCBI gene;Acc:414894]
32. C9orf96 C9orf96 43 0.884 - - - - - - - 0.884 - -
33. ENSGALG00000011906 ENSGALG00000011906 181 0.881 - - - - - - - 0.881 - -
34. TCP11 ENSGALG00000002692 11 0.879 - - - - - - - 0.879 - - t-complex 11, transcript variant X3
35. ENSGALG00000000193 ENSGALG00000000193 19 0.878 - - - - - - - 0.878 - -
36. FN3K ENSGALG00000001531 208 0.872 - - - - - - - 0.872 - - fructosamine 3 kinase [Source:HGNC Symbol;Acc:HGNC:24822]
37. P2RY12 ENSGALG00000036470 20 0.871 - - - - - - - 0.871 - - purinergic receptor P2Y12 [Source:HGNC Symbol;Acc:HGNC:18124]
38. PTGES ENSGALG00000038013 77 0.867 - - - - - 0.867 - - - - prostaglandin E synthase [Source:NCBI gene;Acc:417193]
39. WDR19 ENSGALG00000014064 49 0.863 - - - - - - - 0.863 - - WD repeat domain 19 [Source:HGNC Symbol;Acc:HGNC:18340]
40. CELA3B ENSGALG00000027189 32 0.858 - - - - - - - 0.858 - - chymotrypsin like elastase family member 3B
41. LRRK2 ENSGALG00000007161 66 0.856 - - - - - - - 0.856 - - leucine rich repeat kinase 2 [Source:NCBI gene;Acc:427844]
42. FYCO1 ENSGALG00000040212 75 0.852 - - - - - 0.852 - - - - FYVE and coiled-coil domain containing 1 [Source:NCBI gene;Acc:428453]
43. EPHX1 ENSGALG00000009291 46 0.852 - - - - - - - 0.852 - - epoxide hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:3401]
44. TSC2 ENSGALG00000005646 489 0.844 - - - - - - - 0.844 - - TSC complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:12363]
45. PDCL ENSGALG00000001275 24 0.841 - - - - - 0.841 - - - - phosducin like [Source:HGNC Symbol;Acc:HGNC:8770]
46. LOC428714 ENSGALG00000007530 41 0.841 - - - - - - - 0.841 - - LOC428714, transcript variant X2
47. PARP3 ENSGALG00000004517 331 0.84 - - - - - 0.840 - - - - poly(ADP-ribose) polymerase family member 3 [Source:HGNC Symbol;Acc:HGNC:273]
48. ENSGALG00000013079 ENSGALG00000013079 12 0.837 - - - - - 0.837 - - - -
49. MFSD6 ENSGALG00000041884 1 0.837 - - - - - 0.837 - - - - major facilitator superfamily domain containing 6 [Source:HGNC Symbol;Acc:HGNC:24711]
50. PITPNC1L ENSGALG00000002610 3 0.837 - - - - - 0.837 - - - - phosphatidylinositol transfer protein, cytoplasmic 1-like, transcript variant X2
51. C1H7ORF60 C1H7ORF60 3 0.837 - - - - - 0.837 - - - -
52. FAM160A2 ENSGALG00000003416 23 0.837 - - - - - 0.837 - - - - family with sequence similarity 160 member A2 [Source:HGNC Symbol;Acc:HGNC:25378]
53. TMEM163 ENSGALG00000012190 72 0.837 - - - - - 0.837 - - - - transmembrane protein 163 [Source:HGNC Symbol;Acc:HGNC:25380]
54. PTPN3 ENSGALG00000022909 6 0.837 - - - - - 0.837 - - - - protein tyrosine phosphatase, non-receptor type 3 [Source:HGNC Symbol;Acc:HGNC:9655]
55. RHBDF2 ENSGALG00000001943 1 0.837 - - - - - 0.837 - - - - rhomboid 5 homolog 2 [Source:HGNC Symbol;Acc:HGNC:20788]
56. SEC16A ENSGALG00000002364 19 0.837 - - - - - 0.837 - - - - SEC16 homolog A, endoplasmic reticulum export factor, transcript variant X1
57. PRKG2 ENSGALG00000010909 1 0.837 - - - - - 0.837 - - - - protein kinase cGMP-dependent 2 [Source:HGNC Symbol;Acc:HGNC:9416]
58. AFTPH ENSGALG00000008828 21 0.837 - - - - - 0.837 - - - - aftiphilin [Source:HGNC Symbol;Acc:HGNC:25951]
59. GBE ENSGALG00000011859, ENSGALG00000028016 2 0.837 - - - - - 0.837 - - - - eye-globin, transcript variant X3
60. SNX8 ENSGALG00000004255 4 0.837 - - - - - 0.837 - - - - sorting nexin 8 [Source:HGNC Symbol;Acc:HGNC:14972]
61. ARHGEF17 6 0.837 - - - - - 0.837 - - - - Rho guanine nucleotide exchange factor 17
62. PPP1R12B ENSGALG00000000336 16 0.837 - - - - - 0.837 - - - - protein phosphatase 1 regulatory subunit 12B [Source:NCBI gene;Acc:395478]
63. F-KER ENSGALG00000028706 0 0.837 - - - - - 0.837 - - - - feather keratin I [Source:NCBI gene;Acc:769269]
64. PPP1R1B ENSGALG00000044406 6 0.837 - - - - - 0.837 - - - - protein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]
65. STX3 ENSGALG00000035153 1 0.837 - - - - - 0.837 - - - - syntaxin 3
66. PLD5 ENSGALG00000010737 5 0.837 - - - - - 0.837 - - - - phospholipase D family member 5 [Source:NCBI gene;Acc:421501]
67. ZNRF2 ENSGALG00000031163 0 0.837 - - - - - 0.837 - - - - zinc and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:22316]
68. VSTM2A ENSGALG00000041764 2 0.837 - - - - - 0.837 - - - - V-set and transmembrane domain containing 2A [Source:HGNC Symbol;Acc:HGNC:28499]
69. SP-A SP-A 9 0.837 - - - - - 0.837 - - - -
70. CARF ENSGALG00000008474 6 0.837 - - - - - 0.837 - - - - calcium responsive transcription factor [Source:HGNC Symbol;Acc:HGNC:14435]
71. PSTPIP1 ENSGALG00000002786 9 0.837 - - - - - 0.837 - - - - proline-serine-threonine phosphatase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9580]
72. ENSGALG00000021682 ENSGALG00000021682 0 0.837 - - - - - 0.837 - - - -
73. CBL ENSGALG00000029077 6 0.837 - - - - - 0.837 - - - - Cbl proto-oncogene [Source:NCBI gene;Acc:374038]
74. MINPP1 ENSGALG00000003695 1 0.837 - - - - - 0.837 - - - - multiple inositol-polyphosphate phosphatase 1 [Source:NCBI gene;Acc:395356]
75. DNMBP ENSGALG00000007304 4 0.837 - - - - - 0.837 - - - - dynamin binding protein
76. VPS37D 3 0.837 - - - - - 0.837 - - - - VPS37D, ESCRT-I subunit
77. FARP2 ENSGALG00000005788 6 0.837 - - - - - 0.837 - - - - FERM, ARH/RhoGEF and pleckstrin domain protein 2 [Source:HGNC Symbol;Acc:HGNC:16460]
78. ENSGALG00000028116 ENSGALG00000028116 0 0.837 - - - - - 0.837 - - - -
79. HID1 ENSGALG00000007808 2 0.837 - - - - - 0.837 - - - - HID1 domain containing [Source:HGNC Symbol;Acc:HGNC:15736]
80. BAFF BAFF 40 0.837 - - - - - 0.837 - - - -
81. MAGI1 ENSGALG00000007431 23 0.837 - - - - - 0.837 - - - - membrane associated guanylate kinase, WW and PDZ domain containing 1 [Source:HGNC Symbol;Acc:HGNC:946]
82. RPS6KA2 ENSGALG00000011473 2 0.837 - - - - - 0.837 - - - - ribosomal protein S6 kinase A2 [Source:HGNC Symbol;Acc:HGNC:10431]
83. CORO6 ENSGALG00000028949 21 0.837 - - - - - 0.837 - - - - coronin 6 [Source:HGNC Symbol;Acc:HGNC:21356]
84. GTF3C3 ENSGALG00000007958 6 0.837 - - - - - 0.837 - - - - general transcription factor IIIC subunit 3 [Source:NCBI gene;Acc:424052]
85. AGRP ENSGALG00000002244 27 0.837 - - - - - 0.837 - - - - agouti related neuropeptide [Source:NCBI gene;Acc:427535]
86. SNORA24 SNORA24 2 0.837 - - - - - 0.837 - - - -
87. MAVS ENSGALG00000040428 1 0.837 - - - - - 0.837 - - - - mitochondrial antiviral signaling protein [Source:NCBI gene;Acc:422936]
88. ENPP4 ENSGALG00000016708 18 0.837 - - - - - 0.837 - - - - ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:NCBI gene;Acc:422055]
89. gga-mir-301a ENSGALG00000029989 5 0.837 - - - - - 0.837 - - - - gga-mir-301a [Source:miRBase;Acc:MI0001240]
90. LPP ENSGALG00000007337 18 0.837 - - - - - 0.837 - - - - LIM domain containing preferred translocation partner in lipoma [Source:NCBI gene;Acc:429148]
91. OVST_1 ENSGALG00000011930 9 0.837 - - - - - 0.837 - - - - ovostatin [Source:NCBI gene;Acc:396151]
92. DSCAML1 ENSGALG00000007314 1 0.837 - - - - - 0.837 - - - - DS cell adhesion molecule like 1 [Source:HGNC Symbol;Acc:HGNC:14656]
93. ENSGALG00000013409 ENSGALG00000013409 4 0.837 - - - - - 0.837 - - - -
94. TRIM25 ENSGALG00000003144 12 0.837 - - - - - 0.837 - - - - Gallus gallus tripartite motif containing 25 (TRIM25), mRNA. [Source:RefSeq mRNA;Acc:NM_001318458]
95. ERI3 ENSGALG00000010106 995 0.837 - - - - - 0.837 - - - - ERI1 exoribonuclease family member 3 [Source:HGNC Symbol;Acc:HGNC:17276]
96. AATK ENSGALG00000006901 1 0.837 - - - - - 0.837 - - - - apoptosis associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:21]
97. SLC26A6 ENSGALG00000026089 3 0.837 - - - - - 0.837 - - - - solute carrier family 26 member 6 [Source:NCBI gene;Acc:416012]
98. MFSD11 ENSGALG00000001777 8 0.837 - - - - - 0.837 - - - - major facilitator superfamily domain containing 11 [Source:HGNC Symbol;Acc:HGNC:25458]
99. TBX15 0 0.837 - - - - - 0.837 - - - - T-box 15
100. PABPN1L ENSGALG00000006242 3 0.837 - - - - - 0.837 - - - - poly(A) binding protein nuclear 1 like, cytoplasmic [Source:HGNC Symbol;Acc:HGNC:37237]

There are 103 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA