Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PTPRM

Gene Name Gene ID Reads Annotation
PTPRM ENSGALG00000031284 864 protein tyrosine phosphatase, receptor type M [Source:HGNC Symbol;Acc:HGNC:9675]











Genes with expression patterns similar to PTPRM

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTPRM ENSGALG00000031284 864 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein tyrosine phosphatase, receptor type M [Source:HGNC Symbol;Acc:HGNC:9675]
2. HTR2A ENSGALG00000016992 73 0.849 - - - - - - - - - 0.849 Gallus gallus 5-hydroxytryptamine receptor 2A (HTR2A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318420]
3. PGRMC2 ENSGALG00000010209 568 0.841 - - - - - - - - - 0.841 progesterone receptor membrane component 2 [Source:NCBI gene;Acc:422501]
4. NAV3 ENSGALG00000010311 133 0.837 - - - - - - - - - 0.837 neuron navigator 3 [Source:NCBI gene;Acc:417869]
5. IGF2BP1 ENSGALG00000041204 6420 0.814 - - - - - - - - - 0.814 insulin like growth factor 2 mRNA binding protein 1 [Source:NCBI gene;Acc:395953]
6. TPCN3 ENSGALG00000008198 124 0.801 - - - - - - - - - 0.801 two-pore calcium channel 3 [Source:NCBI gene;Acc:421224]
7. PEX1 ENSGALG00000009410 902 0.787 - - - - - - - - - 0.787 peroxisomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8850]
8. ELF1 ENSGALG00000016947 2769 0.784 - - - - - - - - 0.784 - E74 like ETS transcription factor 1 [Source:NCBI gene;Acc:418828]
9. R3HCC1L ENSGALG00000045403 854 0.784 - - - - - - - 0.784 - - R3H domain and coiled-coil containing 1 like
10. CEP164 ENSGALG00000007310 1020 0.781 - - - - - - - 0.781 - - centrosomal protein 164 [Source:HGNC Symbol;Acc:HGNC:29182]
11. UBAC1 ENSGALG00000042564 598 0.781 - - - - - - - - - 0.781 UBA domain containing 1 [Source:NCBI gene;Acc:427754]
12. USH2A ENSGALG00000009652 2 0.776 - - - - - 0.776 - - - - usherin, transcript variant X3
13. ESYT3 ENSGALG00000012092 13 0.776 - - - - - 0.776 - - - - extended synaptotagmin 3 [Source:HGNC Symbol;Acc:HGNC:24295]
14. ICK ENSGALG00000016321 19 0.776 - - - - - 0.776 - - - - intestinal cell kinase [Source:HGNC Symbol;Acc:HGNC:21219]
15. CCR8 ENSGALG00000038069 6 0.776 - - - - - 0.776 - - - - C-C motif chemokine receptor 8 [Source:NCBI gene;Acc:420718]
16. GALNTL6 ENSGALG00000030588 3 0.776 - - - - - 0.776 - - - - polypeptide N-acetylgalactosaminyltransferase-like 6
17. MFNG ENSGALG00000012442 5 0.776 - - - - - 0.776 - - - - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:7038]
18. KREMEN1 ENSGALG00000005808 5 0.776 - - - - - 0.776 - - - - kringle containing transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:17550]
19. LRCH3 ENSGALG00000007595 21 0.776 - - - - - 0.776 - - - - leucine rich repeats and calponin homology domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28637]
20. PDC ENSGALG00000030417 4 0.776 - - - - - 0.776 - - - - phosducin [Source:HGNC Symbol;Acc:HGNC:8759]
21. ZMAT3 ENSGALG00000040948 4 0.776 - - - - - 0.776 - - - - zinc finger matrin-type 3 [Source:HGNC Symbol;Acc:HGNC:29983]
22. KCNK10 ENSGALG00000010598 7 0.776 - - - - - 0.776 - - - - potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
23. ENSGALG00000028527 ENSGALG00000028527 1 0.776 - - - - - 0.776 - - - -
24. ATP1B4 ENSGALG00000008593 39 0.776 - - - - - 0.776 - - - - ATPase Na+/K+ transporting family member beta 4 [Source:NCBI gene;Acc:422365]
25. MYCBPAP ENSGALG00000007661 369 0.774 - - - - - - - - - 0.774 MYCBP associated protein [Source:HGNC Symbol;Acc:HGNC:19677]
26. MPP5 ENSGALG00000009581 724 0.772 - - - - - - - - 0.772 - membrane palmitoylated protein 5 [Source:NCBI gene;Acc:423281]
27. P4HA2 ENSGALG00000006677 5510 0.769 - - - - - - - - - 0.769 prolyl 4-hydroxylase subunit alpha 2 [Source:NCBI gene;Acc:416326]
28. XYLT2 ENSGALG00000007702 3 0.767 - - - - - 0.767 - - - - xylosyltransferase 2 [Source:NCBI gene;Acc:414780]
29. KIAA0226L KIAA0226L 95 0.763 - - - - - 0.763 - - - -
30. PRSS35 ENSGALG00000015847 52 0.761 - - - - - 0.761 - - - - serine protease 35 [Source:HGNC Symbol;Acc:HGNC:21387]
31. EXOC6 ENSGALG00000006763 119 0.758 - - - - - - - - 0.758 - exocyst complex component 6 [Source:NCBI gene;Acc:423807]
32. OSTM1 ENSGALG00000015306 192 0.758 - - - - - - - - - 0.758 osteopetrosis associated transmembrane protein 1 [Source:NCBI gene;Acc:421773]
33. gga-mir-30d ENSGALG00000018290 9 0.756 - - - - - 0.756 - - - - gga-mir-30d [Source:miRBase;Acc:MI0001198]
34. PNISR ENSGALG00000015483 7711 0.754 - - - - - - - - 0.754 - PNN interacting serine and arginine rich protein [Source:NCBI gene;Acc:421796]
35. RBM33 ENSGALG00000006372 95 0.751 - - - - - - - - - 0.751 RNA binding motif protein 33 [Source:HGNC Symbol;Acc:HGNC:27223]
36. FGFR4 ENSGALG00000028543 1228 0.751 - - - - - - - 0.751 - - fibroblast growth factor receptor 4 [Source:HGNC Symbol;Acc:HGNC:3691]
37. ATRIP ENSGALG00000004670 3647 0.748 - - - - - - - - - 0.748 ATR interacting protein [Source:NCBI gene;Acc:415949]
38. LRRTM3 ENSGALG00000002864 29 0.747 - - - - - 0.747 - - - - leucine rich repeat transmembrane neuronal 3 [Source:NCBI gene;Acc:423649]
39. MNT ENSGALG00000005830 1908 0.746 - - - - - - - 0.746 - - MAX network transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:7188]
40. SLC25A30 ENSGALG00000016979 2625 0.744 - - - - - - - - - 0.744 solute carrier family 25 member 30 [Source:HGNC Symbol;Acc:HGNC:27371]
41. FAM20C ENSGALG00000038768 31 0.742 - - - - - 0.742 - - - - FAM20C, golgi associated secretory pathway kinase [Source:HGNC Symbol;Acc:HGNC:22140]
42. PANX3 ENSGALG00000021443 431 0.742 - - - - - - - - - 0.742 pannexin 3 [Source:HGNC Symbol;Acc:HGNC:20573]
43. FAM135A ENSGALG00000015969 2218 0.742 - - - - - - - 0.742 - - family with sequence similarity 135 member A [Source:HGNC Symbol;Acc:HGNC:21084]
44. GRAMD4 ENSGALG00000034274 3826 0.74 - - - - - - - 0.740 - - GRAM domain containing 4 [Source:HGNC Symbol;Acc:HGNC:29113]
45. OGDHL ENSGALG00000002266 57 0.738 - - - - - 0.738 - - - - oxoglutarate dehydrogenase like [Source:NCBI gene;Acc:423618]
46. C17H9ORF7 C17H9ORF7 71 0.738 - - - - - 0.738 - - - -
47. DIS3 ENSGALG00000016930 3696 0.737 - - - - - - - - - 0.737 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
48. PIEZO2 ENSGALG00000042134 323 0.736 - - - - - - - - - 0.736 piezo type mechanosensitive ion channel component 2, transcript variant X7
49. CCP110 ENSGALG00000006925 59 0.736 - - - - - - - - - 0.736 centriolar coiled-coil protein 110 [Source:HGNC Symbol;Acc:HGNC:24342]
50. ARHGAP12 ENSGALG00000007254 479 0.734 - - - - - - - - 0.734 - Rho GTPase activating protein 12 [Source:HGNC Symbol;Acc:HGNC:16348]
51. LOC100857745 ENSGALG00000027114 118 0.733 - - - - - - - - - 0.733 collagen alpha-1(I) chain-like
52. RALB ENSGALG00000026493 14590 0.732 - - - - - - - - 0.732 - RAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]
53. RORALPHA1 RORALPHA1 119 0.731 - - - - - 0.731 - - - -
54. USP15 ENSGALG00000030024 2761 0.731 - - - - - - - - - 0.731 ubiquitin specific peptidase 15 [Source:NCBI gene;Acc:395644]
55. ELAC2 ENSGALG00000001036 2154 0.731 - - - - - - - - - 0.731 elaC ribonuclease Z 2 [Source:HGNC Symbol;Acc:HGNC:14198]
56. ATP8B4 ENSGALG00000002326 456 0.729 - - - - - - - - 0.729 - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
57. FANCA ENSGALG00000000516 250 0.728 - - - - - - - - - 0.728 Fanconi anemia complementation group A [Source:NCBI gene;Acc:415854]
58. LANCL3 ENSGALG00000016265 9 0.727 - - - - - - - - - 0.727 LanC like 3 [Source:HGNC Symbol;Acc:HGNC:24767]
59. TPCN2 ENSGALG00000007550 10 0.726 - - - - - - - - - 0.726 two pore segment channel 2 [Source:HGNC Symbol;Acc:HGNC:20820]
60. ZNF592 ENSGALG00000031589 1595 0.726 - - - - - - - - - 0.726 zinc finger protein 592 [Source:HGNC Symbol;Acc:HGNC:28986]
61. HERPUD1 ENSGALG00000001220 18 0.726 - - - - - - - - - 0.726 homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]
62. PAG1 ENSGALG00000034188 9 0.726 - - - - - - - - - 0.726 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:HGNC Symbol;Acc:HGNC:30043]
63. VRTN ENSGALG00000010232 692 0.725 - - - - - - - - 0.725 - vertebrae development associated [Source:HGNC Symbol;Acc:HGNC:20223]
64. CUX1 ENSGALG00000021636 2587 0.724 - - - - - - - 0.724 - - cut like homeobox 1 [Source:NCBI gene;Acc:101749861]
65. EPC1 ENSGALG00000007169 101 0.723 - - - - - - - - - 0.723 enhancer of polycomb homolog 1 [Source:HGNC Symbol;Acc:HGNC:19876]
66. TOR1AIP2 ENSGALG00000004017 2 0.722 - - - - - 0.722 - - - - torsin 1A interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:24055]
67. ABCA1 ENSGALG00000015433 11 0.722 - - - - - 0.722 - - - - ATP-binding cassette, sub-family A (ABC1), member 1 [Source:NCBI gene;Acc:373945]
68. XYLT1 ENSGALG00000006757 169 0.721 - - - - - - - - - 0.721 xylosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:15516]
69. ZNF330 ENSGALG00000009868 257 0.721 - - - - - - - - - 0.721 zinc finger protein 330 [Source:NCBI gene;Acc:422453]
70. S1PR1 ENSGALG00000005208 12 0.72 - - - - - - - - - 0.720 sphingosine-1-phosphate receptor 1 [Source:HGNC Symbol;Acc:HGNC:3165]
71. PIGV ENSGALG00000039883 32 0.72 - - - - - - - - - 0.720 phosphatidylinositol glycan anchor biosynthesis class V [Source:HGNC Symbol;Acc:HGNC:26031]
72. GAA ENSGALG00000038853 158 0.719 - - - - - - - - - 0.719 glucosidase alpha, acid [Source:HGNC Symbol;Acc:HGNC:4065]
73. P2RX5 ENSGALG00000004613 31 0.719 - - - - - 0.719 - - - - purinergic receptor P2X 5 [Source:NCBI gene;Acc:395507]
74. GALNT7 ENSGALG00000010744 8645 0.718 - - - - - - - - - 0.718 polypeptide N-acetylgalactosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4129]
75. CSMD3 ENSGALG00000031578 23 0.718 - - - - - - - - - 0.718 CUB and Sushi multiple domains 3 [Source:HGNC Symbol;Acc:HGNC:19291]
76. LPGAT1 ENSGALG00000009848 33 0.717 - - - - - - - - - 0.717 lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
77. AKAP10 ENSGALG00000004679 103 0.717 - - - - - - - - - 0.717 A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
78. EHD4 ENSGALG00000008950 22 0.716 - - - - - - - - - 0.716 EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]
79. EMC1 ENSGALG00000003969 6876 0.716 - - - - 0.716 - - - - - ER membrane protein complex subunit 1 [Source:NCBI gene;Acc:419470]
80. CCLI8 ENSGALG00000043065 196 0.715 - - - - - - - - 0.715 - chemokine
81. WDR63 ENSGALG00000008696 15 0.715 - - - - - - - - - 0.715 WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
82. WNK4 ENSGALG00000032191 962 0.714 - - - - - - - - - 0.714 WNK lysine deficient protein kinase 4 [Source:HGNC Symbol;Acc:HGNC:14544]
83. LONRF2 ENSGALG00000016768 193 0.713 - - - - - - - - - 0.713 LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]
84. RFNG ENSGALG00000002841 1643 0.712 - - - - - - - 0.712 - - RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395789]
85. FBLIM1 ENSGALG00000003636 1498 0.711 - - - - - - - 0.711 - - filamin binding LIM protein 1 [Source:HGNC Symbol;Acc:HGNC:24686]
86. FER1L6 ENSGALG00000033783 196 0.711 - - - - - - - - - 0.711 fer-1 like family member 6 [Source:HGNC Symbol;Acc:HGNC:28065]
87. TLN2 2295 0.709 - - - - - - - - 0.709 - talin 2, transcript variant X5
88. SNED1 ENSGALG00000043596 693 0.709 - - - - - - - - 0.709 - sushi, nidogen and EGF like domains 1 [Source:HGNC Symbol;Acc:HGNC:24696]
89. RS1 ENSGALG00000016523 11 0.708 - - - - - 0.708 - - - - retinoschisin 1 [Source:NCBI gene;Acc:772315]
90. THSD4 ENSGALG00000004087 12 0.708 - - - - - 0.708 - - - - thrombospondin type 1 domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25835]
91. PQLC3 ENSGALG00000016449 39 0.708 - - - - - - - - - 0.708 PQ loop repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:28503]
92. DARS2 ENSGALG00000023749 2386 0.707 - - - - - - - - - 0.707 aspartyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25538]
93. PRODH ENSGALG00000007728 1659 0.707 - - - - - - - - - 0.707 proline dehydrogenase 1
94. FAM126A ENSGALG00000010925 4168 0.707 - - - - - - - - - 0.707 family with sequence similarity 126 member A [Source:NCBI gene;Acc:420611]
95. FKBP8 ENSGALG00000003357 942 0.706 - - - - - - - - - 0.706 FK506 binding protein 8 [Source:NCBI gene;Acc:420123]
96. NEURL NEURL 221 0.706 - - - - - - - - - 0.706
97. COX19 ENSGALG00000027698 4398 0.706 - - - - - - - - - 0.706 cytochrome c oxidase assembly factor COX19 [Source:NCBI gene;Acc:416452]
98. SCL SCL 69 0.706 - - - - - - - - - 0.706
99. ARHGAP42 ENSGALG00000017196 240 0.704 - - - - - - - - - 0.704 Rho GTPase activating protein 42 [Source:HGNC Symbol;Acc:HGNC:26545]
100. RAD54L2 ENSGALG00000003243 187 0.703 - - - - - - - - - 0.703 RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]

There are 8 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA