Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PTPRK

Gene Name Gene ID Reads Annotation
PTPRK ENSGALG00000037423 3688 protein tyrosine phosphatase, receptor type K [Source:HGNC Symbol;Acc:HGNC:9674]











Genes with expression patterns similar to PTPRK

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTPRK ENSGALG00000037423 3688 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein tyrosine phosphatase, receptor type K [Source:HGNC Symbol;Acc:HGNC:9674]
2. LRIG3 ENSGALG00000009755 6655 1.598 - - - - - - 0.798 0.800 - - leucine rich repeats and immunoglobulin like domains 3 [Source:NCBI gene;Acc:417813]
3. KIF21B ENSGALG00000034347 4144 1.597 - - - - - - 0.780 0.817 - - kinesin family member 21B [Source:HGNC Symbol;Acc:HGNC:29442]
4. CUX1_1 ENSGALG00000021636 3705 1.596 - - - - - - - 0.892 0.704 - cut like homeobox 1 [Source:NCBI gene;Acc:101749861]
5. MMP15 ENSGALG00000038758 49988 1.576 - - - - - - 0.780 0.796 - - matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]
6. RASA3 ENSGALG00000016817 2146 1.568 - - - - - - 0.753 0.815 - - RAS p21 protein activator 3 [Source:NCBI gene;Acc:418736]
7. GPALPP1 ENSGALG00000031567 4221 1.538 - - - - - - 0.763 0.775 - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
8. PTX3 ENSGALG00000028284 2984 1.535 - - - - - - 0.745 0.790 - - pentraxin 3 [Source:NCBI gene;Acc:548626]
9. BET1L ENSGALG00000004172 5305 1.519 - - - - - - 0.767 0.752 - - Bet1 golgi vesicular membrane trafficking protein like [Source:NCBI gene;Acc:422985]
10. CYB5R2 ENSGALG00000032372 7967 1.518 - - - - - - 0.717 0.801 - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
11. ARNTL2 ENSGALG00000014096 998 1.509 - - - - - - 0.708 0.801 - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:NCBI gene;Acc:373925]
12. RELL1 ENSGALG00000014336 2950 1.483 - - - - - - 0.737 0.746 - - RELT like 1 [Source:NCBI gene;Acc:422795]
13. CDH11 ENSGALG00000039985 18212 1.429 - - - - - - 0.719 - 0.710 - cadherin 11 [Source:NCBI gene;Acc:415797]
14. CLMP ENSGALG00000006507 8079 0.902 - - - - - - - 0.902 - - CXADR like membrane protein [Source:HGNC Symbol;Acc:HGNC:24039]
15. ITFG2 ENSGALG00000014335 1896 0.892 - - - - - - - 0.892 - - integrin alpha FG-GAP repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:30879]
16. RCAN3 ENSGALG00000004282 7778 0.88 - - - - - - - 0.880 - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
17. AIP ENSGALG00000040247 4166 0.878 - - - - - - - 0.878 - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
18. GATA5 ENSGALG00000005352 11876 0.87 - - - - - - - - 0.870 - GATA binding protein 5 [Source:NCBI gene;Acc:396391]
19. ATP6V0A2 ENSGALG00000003194 4824 0.868 - - - - - - - 0.868 - - ATPase H+ transporting V0 subunit a2 [Source:NCBI gene;Acc:395473]
20. UPF1 ENSGALG00000003220 9496 0.866 - - - - - - - 0.866 - - UPF1, RNA helicase and ATPase [Source:HGNC Symbol;Acc:HGNC:9962]
21. LIMS1 ENSGALG00000029970 7244 0.865 - - - - - - - 0.865 - - LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:414880]
22. PDLIM5 ENSGALG00000012211 3064 0.861 - - - - - - - 0.861 - - PDZ and LIM domain 5 [Source:NCBI gene;Acc:422699]
23. CAMSAP1 ENSGALG00000001692 2617 0.859 - - - - - - - 0.859 - - calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
24. RNF185 ENSGALG00000006960 5428 0.857 - - - - - - - 0.857 - - ring finger protein 185 [Source:NCBI gene;Acc:416965]
25. DOCK10 ENSGALG00000005030 848 0.854 - - - - - - - 0.854 - - dedicator of cytokinesis 10 [Source:HGNC Symbol;Acc:HGNC:23479]
26. COL4A5 ENSGALG00000008141 15874 0.853 - - - - - - - - 0.853 - collagen type IV alpha 5 chain [Source:HGNC Symbol;Acc:HGNC:2207]
27. AMACR ENSGALG00000003326 2657 0.851 - - - - - - 0.851 - - - alpha-methylacyl-CoA racemase [Source:NCBI gene;Acc:427429]
28. SNX12 ENSGALG00000005659 9503 0.85 - - - - - - - 0.850 - - sorting nexin 12 [Source:NCBI gene;Acc:428704]
29. PTPN4 3030 0.845 - - - - - - - 0.845 - - protein tyrosine phosphatase, non-receptor type 4, transcript variant X2
30. ENSGALG00000021439 ENSGALG00000021439 628 0.843 - - - - - - - 0.843 - -
31. LRPAP1 ENSGALG00000015612 3526 0.842 - - - - - - - 0.842 - - LDL receptor related protein associated protein 1 [Source:NCBI gene;Acc:395936]
32. ALAS1 3660 0.84 - - - - - - - 0.840 - - 5'-aminolevulinate synthase 1, transcript variant X1
33. LOC112529965 ENSGALG00000010758 5395 0.838 - - - - - - - 0.838 - - NADH-cytochrome b5 reductase-like
34. NBEA 1982 0.838 - - - - - - - 0.838 - - neurobeachin, transcript variant X10
35. TXNDC11 ENSGALG00000003154 2224 0.837 - - - - - - - 0.837 - - thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
36. RNH1 ENSGALG00000006904 14542 0.836 - - - - - - - 0.836 - - ribonuclease/angiogenin inhibitor 1 [Source:NCBI gene;Acc:423111]
37. NT5C3B ENSGALG00000003651 5190 0.836 - - - - - - - 0.836 - - 5'-nucleotidase, cytosolic IIIB [Source:NCBI gene;Acc:420034]
38. MTIF2 ENSGALG00000031265 2366 0.836 - - - - - - - 0.836 - - mitochondrial translational initiation factor 2 [Source:NCBI gene;Acc:421213]
39. USP28 ENSGALG00000006969 2645 0.835 - - - - - - - 0.835 - - ubiquitin specific peptidase 28 [Source:NCBI gene;Acc:428246]
40. IBTK ENSGALG00000015864 3154 0.835 - - - - - - - 0.835 - - inhibitor of Bruton tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:17853]
41. PPP2R3A ENSGALG00000034512 1091 0.835 - - - - - - - 0.835 - - protein phosphatase 2 regulatory subunit B''alpha [Source:HGNC Symbol;Acc:HGNC:9307]
42. PNN ENSGALG00000010167 6417 0.834 - - - - - - - 0.834 - - pinin, desmosome associated protein [Source:HGNC Symbol;Acc:HGNC:9162]
43. NCAPH ENSGALG00000032270 2103 0.833 - - - - - - - 0.833 - - non-SMC condensin I complex subunit H [Source:NCBI gene;Acc:425304]
44. NSMCE2 ENSGALG00000043439 5658 0.833 - - - - - - - 0.833 - - NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase [Source:NCBI gene;Acc:420333]
45. CPT2 ENSGALG00000010681 3211 0.833 - - - - - - - 0.833 - - carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
46. GTPBP4 ENSGALG00000006703 16183 0.832 - - - - - - - 0.832 - - GTP binding protein 4 [Source:NCBI gene;Acc:420458]
47. TBX3 ENSGALG00000036043 2888 0.832 - - - - - - 0.832 - - - T-box 3 [Source:NCBI gene;Acc:374202]
48. GNG12 ENSGALG00000026591 5817 0.832 - - - - - - - 0.832 - - G protein subunit gamma 12, transcript variant X21
49. TCTN2 ENSGALG00000023683 3596 0.831 - - - - - - - 0.831 - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
50. BUD13_1 ENSGALG00000025882 1118 0.831 - - - - - - - 0.831 - - BUD13 homolog [Source:NCBI gene;Acc:428248]
51. ARID2 ENSGALG00000033074 3461 0.831 - - - - - - - 0.831 - - AT-rich interaction domain 2 [Source:HGNC Symbol;Acc:HGNC:18037]
52. TAF5 ENSGALG00000008241 5227 0.83 - - - - - - - 0.830 - - TATA-box binding protein associated factor 5 [Source:NCBI gene;Acc:423872]
53. C9orf64 ENSGALG00000012589 6097 0.83 - - - - - - - 0.830 - - chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
54. STOML2 STOML2 15566 0.828 - - - - - - - 0.828 - -
55. PDZD8 ENSGALG00000029095 1068 0.827 - - - - - - - 0.827 - - PDZ domain containing 8 [Source:HGNC Symbol;Acc:HGNC:26974]
56. TANK ENSGALG00000011131 3382 0.826 - - - - - - - 0.826 - - TRAF family member associated NFKB activator [Source:NCBI gene;Acc:424190]
57. GOLGA5 ENSGALG00000010813 1319 0.826 - - - - - - 0.826 - - - golgin A5 [Source:HGNC Symbol;Acc:HGNC:4428]
58. NAB1 ENSGALG00000037778 3467 0.825 - - - - - - 0.825 - - - NGFI-A binding protein 1 [Source:NCBI gene;Acc:374126]
59. SELENBP1 ENSGALG00000000866 1253 0.824 - - - - - - - 0.824 - - selenium binding protein 1 [Source:NCBI gene;Acc:425664]
60. TRAF7 ENSGALG00000005767 4615 0.824 - - - - - - 0.824 - - - TNF receptor associated factor 7 [Source:NCBI gene;Acc:416555]
61. RGL1 ENSGALG00000004728 3004 0.823 - - - - - - 0.823 - - - ral guanine nucleotide dissociation stimulator like 1 [Source:NCBI gene;Acc:424446]
62. SMG8 ENSGALG00000005093 5557 0.822 - - - - - - - 0.822 - - SMG8 nonsense mediated mRNA decay factor
63. HYAL1 ENSGALG00000000785 1778 0.822 - - - - - - - 0.822 - - hyaluronoglucosaminidase 1, transcript variant X3
64. VPS13D ENSGALG00000034777 2350 0.821 - - - - - - - 0.821 - - vacuolar protein sorting 13 homolog D [Source:HGNC Symbol;Acc:HGNC:23595]
65. AGRN ENSGALG00000039193 8135 0.821 - - - - - - - 0.821 - - agrin [Source:NCBI gene;Acc:396538]
66. TMEM161A ENSGALG00000025809 2813 0.821 - - - - - - - 0.821 - - transmembrane protein 161A [Source:HGNC Symbol;Acc:HGNC:26020]
67. GLT8D1 ENSGALG00000001642 4232 0.821 - - - - - - - 0.821 - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
68. ISCU ENSGALG00000004869 6852 0.82 - - - - - - - 0.820 - - iron-sulfur cluster assembly enzyme [Source:HGNC Symbol;Acc:HGNC:29882]
69. CCDC53 CCDC53 3732 0.82 - - - - - - - 0.820 - -
70. CRTAP ENSGALG00000034163 6453 0.819 - - - - - - - 0.819 - - cartilage associated protein [Source:NCBI gene;Acc:395992]
71. PDE3B ENSGALG00000006035 3732 0.819 - - - - - - - 0.819 - - phosphodiesterase 3B [Source:NCBI gene;Acc:423064]
72. BRCA1 ENSGALG00000002781 2052 0.819 - - - - - - - 0.819 - - BRCA1, DNA repair associated [Source:NCBI gene;Acc:373983]
73. CREPT CREPT 17142 0.817 - - - - - - - 0.817 - -
74. EML1 1941 0.816 - - - - - - - 0.816 - - echinoderm microtubule associated protein like 1, transcript variant X11
75. UMPS ENSGALG00000011770 11331 0.816 - - - - - - 0.816 - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
76. CFC1 ENSGALG00000012623 3164 0.816 - - - - - - - - 0.816 - cripto, FRL-1, cryptic family 1 [Source:NCBI gene;Acc:395437]
77. HAGHL ENSGALG00000021040 1568 0.816 - - - - - - - 0.816 - - hydroxyacylglutathione hydrolase-like [Source:NCBI gene;Acc:416536]
78. SLC19A1 ENSGALG00000030511 1397 0.815 - - - - - - - 0.815 - - solute carrier family 19 member 1 [Source:NCBI gene;Acc:424034]
79. BUD13 ENSGALG00000025882 1800 0.814 - - - - - - - 0.814 - - BUD13 homolog [Source:NCBI gene;Acc:428248]
80. MTUS1 ENSGALG00000013615 1040 0.814 - - - - - - - 0.814 - - microtubule associated tumor suppressor 1, transcript variant X4
81. NECAB1 ENSGALG00000029509 202 0.813 - - - - - - - - 0.813 - N-terminal EF-hand calcium binding protein 1 [Source:NCBI gene;Acc:420219]
82. PECR ENSGALG00000011497 1714 0.812 - - - - - - - 0.812 - - peroxisomal trans-2-enoyl-CoA reductase [Source:NCBI gene;Acc:424224]
83. FGFR1 ENSGALG00000039786 4480 0.812 - - - - - - - 0.812 - - fibroblast growth factor receptor 1 [Source:NCBI gene;Acc:396516]
84. PHF2 ENSGALG00000039208 2003 0.812 - - - - - - - 0.812 - - PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
85. ZNF384 ENSGALG00000032599 2369 0.811 - - - - - - - 0.811 - - zinc finger protein 384 [Source:NCBI gene;Acc:770350]
86. TAF1A ENSGALG00000009441 2431 0.81 - - - - - - - 0.810 - - TATA-box binding protein associated factor, RNA polymerase I subunit A [Source:NCBI gene;Acc:421338]
87. TICAM1 ENSGALG00000026850 723 0.81 - - - - - - - 0.810 - - toll like receptor adaptor molecule 1 [Source:NCBI gene;Acc:100008585]
88. UBN1 ENSGALG00000031416 2848 0.809 - - - - - - - 0.809 - - ubinuclein 1 [Source:NCBI gene;Acc:416398]
89. BIVM ENSGALG00000016861 3987 0.809 - - - - - - - 0.809 - - basic, immunoglobulin-like variable motif containing [Source:NCBI gene;Acc:374099]
90. ACSS2 ENSGALG00000003362 3023 0.808 - - - - - - - 0.808 - - acyl-CoA synthetase short chain family member 2 [Source:HGNC Symbol;Acc:HGNC:15814]
91. AGGF1 ENSGALG00000004311 3011 0.808 - - - - - - - 0.808 - - angiogenic factor with G-patch and FHA domains 1, transcript variant X1
92. PLEKHH2 ENSGALG00000009947 6384 0.808 - - - - - - - 0.808 - - pleckstrin homology, MyTH4 and FERM domain containing H2 [Source:HGNC Symbol;Acc:HGNC:30506]
93. PRPF40A ENSGALG00000012526 7724 0.807 - - - - - - - 0.807 - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
94. GAS2 ENSGALG00000003655 2672 0.806 - - - - - - - 0.806 - - growth arrest specific 2 [Source:NCBI gene;Acc:422970]
95. CCNL2 ENSGALG00000001551 2620 0.806 - - - - - - - 0.806 - - cyclin L2 [Source:NCBI gene;Acc:395124]
96. ASNSD1 ENSGALG00000041666 3757 0.806 - - - - - - - 0.806 - - asparagine synthetase domain containing 1 [Source:NCBI gene;Acc:423983]
97. PTEN ENSGALG00000003634 5048 0.806 - - - - - - 0.806 - - - phosphatase and tensin homolog [Source:HGNC Symbol;Acc:HGNC:9588]
98. FBXL17 ENSGALG00000000276 2443 0.805 - - - - - - - 0.805 - - F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
99. FTD FTD 3041 0.804 - - - - - - 0.804 - - -
100. EXOSC3 ENSGALG00000002426 7255 0.804 - - - - - - 0.804 - - - exosome component 3 [Source:NCBI gene;Acc:423626]

There are 302 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA