Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PTPRJ

Gene Name Gene ID Reads Annotation
PTPRJ ENSGALG00000006382 891 protein tyrosine phosphatase, receptor type J [Source:NCBI gene;Acc:395330]











Genes with expression patterns similar to PTPRJ

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTPRJ ENSGALG00000006382 891 7 - - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein tyrosine phosphatase, receptor type J [Source:NCBI gene;Acc:395330]
2. AKAP11 ENSGALG00000022739 82 1.774 - - - - - - - - 0.897 0.877 A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
3. GLOD4 ENSGALG00000027245 1532 1.571 - - - - - - 0.826 - - 0.745 glyoxalase domain containing 4 [Source:NCBI gene;Acc:101750166]
4. NMB ENSGALG00000043506 1387 1.561 - - - - - - 0.727 - - 0.834 neuromedin B [Source:NCBI gene;Acc:415333]
5. MXRA8 ENSGALG00000001561 181 1.527 - - - - - 0.813 - 0.714 - - matrix remodeling associated 8 [Source:NCBI gene;Acc:395347]
6. NR6A1 ENSGALG00000001073 2071 1.524 - - - - - - 0.742 0.782 - - nuclear receptor subfamily 6 group A member 1 [Source:HGNC Symbol;Acc:HGNC:7985]
7. SCARB2 ENSGALG00000011499 2763 1.503 - - - - - - - 0.745 - 0.758 scavenger receptor class B member 2 [Source:HGNC Symbol;Acc:HGNC:1665]
8. SLC2A9 ENSGALG00000014971 751 1.426 - - - - - - 0.704 0.722 - - solute carrier family 2 member 9 [Source:HGNC Symbol;Acc:HGNC:13446]
9. POT1 ENSGALG00000008740 947 1.422 - - - - - - 0.712 - - 0.710 protection of telomeres 1 [Source:NCBI gene;Acc:404538]
10. ATF6 ENSGALG00000032278 71 0.91 - - - - - - - - 0.910 - activating transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:791]
11. UBE2L6 ENSGALG00000046098 393 0.886 - - - - - - - - 0.886 - ubiquitin-conjugating enzyme E2L 6, transcript variant X3
12. TM6SF1 ENSGALG00000006027 20 0.884 - - - - - - - - - 0.884 transmembrane 6 superfamily member 1 [Source:NCBI gene;Acc:415462]
13. SERPINF2 ENSGALG00000002987 236 0.875 - - - - - - - 0.875 - - serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]
14. KAT6B ENSGALG00000005035 301 0.875 - - - - - - - - - 0.875 lysine acetyltransferase 6B [Source:HGNC Symbol;Acc:HGNC:17582]
15. MYOF ENSGALG00000006705 793 0.872 - - - - - - - - 0.872 - myoferlin [Source:HGNC Symbol;Acc:HGNC:3656]
16. ING5 ENSGALG00000006317 149 0.872 - - - - - - - - - 0.872 inhibitor of growth family member 5 [Source:NCBI gene;Acc:424852]
17. CLIC3 ENSGALG00000038789 233 0.868 - - - - - - - - - 0.868 chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
18. FKBP10 ENSGALG00000025764 7668 0.865 - - - - - - - 0.865 - - FK506 binding protein 10 [Source:HGNC Symbol;Acc:HGNC:18169]
19. TRAK2 ENSGALG00000008370 46 0.865 - - - - - - - - - 0.865 trafficking kinesin protein 2 [Source:HGNC Symbol;Acc:HGNC:13206]
20. TNFAIP2 ENSGALG00000011446 32 0.864 - - - - - - - - - 0.864 TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
21. KCNB1 ENSGALG00000004758 620 0.862 - - - - - - - - - 0.862 potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]
22. LOC770996 ENSGALG00000016570 635 0.861 - - - - - - - 0.861 - - L-gulonolactone oxidase-like
23. TNN ENSGALG00000004538 21 0.861 - - - - - - - - - 0.861 tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
24. TMEM200B ENSGALG00000024318 117 0.86 - - - - - - - - - 0.860 transmembrane protein 200B [Source:HGNC Symbol;Acc:HGNC:33785]
25. DOCK1 ENSGALG00000042259 5438 0.86 - - - - - - - 0.860 - - dedicator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:2987]
26. PKD2 ENSGALG00000010921 55 0.86 - - - - - - - - - 0.860 polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
27. ZNF385B ENSGALG00000009012 290 0.859 - - - - - - - - - 0.859 zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
28. ACADL ENSGALG00000002891 8058 0.859 - - - - - - - 0.859 - - acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:424005]
29. gga-mir-6544 ENSGALG00000027916 19 0.857 - - - - - - - - - 0.857 gga-mir-6544 [Source:miRBase;Acc:MI0022360]
30. TNFAIP3 ENSGALG00000013861 11 0.857 - - - - - - - - - 0.857 TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]
31. SLC30A9 ENSGALG00000031415 36 0.857 - - - - - - - - - 0.857 solute carrier family 30 member 9
32. C3orf58 ENSGALG00000002347 27 0.855 - - - - - - - - - 0.855 chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
33. NMBR ENSGALG00000013813 15 0.855 - - - - - - - - - 0.855 neuromedin B receptor [Source:HGNC Symbol;Acc:HGNC:7843]
34. ZMYND10 ENSGALG00000035883 58 0.855 - - - - - - - - - 0.855 zinc finger MYND-type containing 10 [Source:HGNC Symbol;Acc:HGNC:19412]
35. BOK ENSGALG00000005772 117 0.854 - - - - - - - - - 0.854 BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
36. GSS ENSGALG00000003281 57 0.854 - - - - - - - - - 0.854 glutathione synthetase [Source:HGNC Symbol;Acc:HGNC:4624]
37. TRMT61A ENSGALG00000011522 14 0.852 - - - - - - - - - 0.852 tRNA methyltransferase 61A [Source:HGNC Symbol;Acc:HGNC:23790]
38. TBX5 ENSGALG00000008253 820 0.852 - - - - - - - - - 0.852 T-box 5 [Source:NCBI gene;Acc:373988]
39. KIAA1671 ENSGALG00000005512 2540 0.851 - - - - - - - 0.851 - - KIAA1671 [Source:NCBI gene;Acc:768701]
40. FAM192A ENSGALG00000021473 10213 0.849 - - - - - - - - - 0.849 family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
41. GRHPR ENSGALG00000005423 1567 0.848 - - - - - - - 0.848 - - glyoxylate and hydroxypyruvate reductase [Source:HGNC Symbol;Acc:HGNC:4570]
42. SMEK1 SMEK1 95 0.847 - - - - - - - - - 0.847
43. BMP2K ENSGALG00000010885 37 0.846 - - - - - - - - - 0.846 BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
44. CREB5 ENSGALG00000038265 92 0.846 - - - - - - - - - 0.846 cAMP responsive element binding protein 5 [Source:HGNC Symbol;Acc:HGNC:16844]
45. ZEB2 ENSGALG00000040465 315 0.844 - - - - - - - - - 0.844 Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
46. CYP20A1 ENSGALG00000008730 930 0.843 - - - - - - - 0.843 - - cytochrome P450 family 20 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:20576]
47. ERRFI1 ENSGALG00000000535 83 0.842 - - - - - - - - - 0.842 ERBB receptor feedback inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:18185]
48. COQ2 ENSGALG00000041294 25 0.841 - - - - - - - - - 0.841 coenzyme Q2, polyprenyltransferase [Source:HGNC Symbol;Acc:HGNC:25223]
49. ENSGALG00000012665 ENSGALG00000012665 1381 0.841 - - - - - - - - 0.841 -
50. PXK ENSGALG00000007052 121 0.841 - - - - - - - - - 0.841 PX domain containing serine/threonine kinase like [Source:HGNC Symbol;Acc:HGNC:23326]
51. SLC7A2 ENSGALG00000013627 58 0.84 - - - - - - - - - 0.840 solute carrier family 7 member 2 [Source:NCBI gene;Acc:422730]
52. ELF2 ENSGALG00000009774 83 0.837 - - - - - - - - 0.837 - E74 like ETS transcription factor 2, transcript variant X5
53. FAM154B FAM154B 175 0.835 - - - - - - - - - 0.835
54. PHF11 ENSGALG00000019094 770 0.834 - - - - - - - - - 0.834 PHD finger protein 11 [Source:HGNC Symbol;Acc:HGNC:17024]
55. EREG ENSGALG00000010864 46 0.833 - - - - - - - 0.833 - - epiregulin [Source:NCBI gene;Acc:408036]
56. ORC6 ENSGALG00000004342 454 0.832 - - - - - - - 0.832 - - origin recognition complex subunit 6 [Source:NCBI gene;Acc:415749]
57. CKLF ENSGALG00000005254 3365 0.832 - - - - - - - - - 0.832 chemokine like factor [Source:HGNC Symbol;Acc:HGNC:13253]
58. GSN ENSGALG00000001446 5605 0.831 - - - - - - - 0.831 - - gelsolin [Source:NCBI gene;Acc:395774]
59. INADL INADL 51 0.83 - - - - - - - - - 0.830
60. STIL ENSGALG00000010478 1398 0.83 - - - - - - - - 0.830 - STIL, centriolar assembly protein [Source:HGNC Symbol;Acc:HGNC:10879]
61. KIF24 ENSGALG00000005806 124 0.83 - - - - - - - - - 0.830 kinesin family member 24 [Source:HGNC Symbol;Acc:HGNC:19916]
62. TGFBRAP1 ENSGALG00000016795 81 0.83 - - - - - - - - - 0.830 transforming growth factor beta receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16836]
63. BLOC1S2 ENSGALG00000005794 544 0.829 - - - - - - - - - 0.829 biogenesis of lysosomal organelles complex 1 subunit 2 [Source:NCBI gene;Acc:423768]
64. RAD1 ENSGALG00000003365 1417 0.827 - - - - - - - - - 0.827 RAD1 checkpoint DNA exonuclease [Source:HGNC Symbol;Acc:HGNC:9806]
65. MYCN ENSGALG00000016462 1930 0.826 - - - - - - - - - 0.826 MYCN proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:421948]
66. ENSGALG00000026802 ENSGALG00000026802 14688 0.825 - - - - - - - 0.825 - -
67. SENP7 ENSGALG00000044642 48 0.825 - - - - - - - - - 0.825 SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
68. WAPAL WAPAL 625 0.825 - - - - - - - - 0.825 -
69. COG1 ENSGALG00000029893 4309 0.825 - - - - - - - 0.825 - - component of oligomeric golgi complex 1 [Source:NCBI gene;Acc:417449]
70. MVP ENSGALG00000040471 1407 0.825 - - - - - - - - - 0.825 major vault protein [Source:NCBI gene;Acc:420049]
71. OSBPL2 ENSGALG00000005195 94 0.824 - - - - - - - - - 0.824 oxysterol binding protein like 2 [Source:NCBI gene;Acc:419227]
72. SLC20A1 ENSGALG00000013740 40 0.824 - - - - - - - - - 0.824 solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
73. BTG2 ENSGALG00000026858 6716 0.823 - - - - - - - 0.823 - - BTG anti-proliferation factor 2 [Source:HGNC Symbol;Acc:HGNC:1131]
74. CRYD2 CRYD2 624 0.822 - - - - - - - 0.822 - -
75. EXOSC8 ENSGALG00000017048 2939 0.822 - - - - - - - - - 0.822 exosome component 8 [Source:HGNC Symbol;Acc:HGNC:17035]
76. GLB1L2 ENSGALG00000001604 4057 0.821 - - - - - - - 0.821 - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
77. ROGDI ENSGALG00000001841 313 0.821 - - - - - - - - - 0.821 rogdi homolog [Source:HGNC Symbol;Acc:HGNC:29478]
78. NOTCH2 ENSGALG00000002922 3272 0.82 - - - - - - - 0.820 - - notch 2 [Source:NCBI gene;Acc:374031]
79. UGT8L ENSGALG00000005599 93 0.82 - - - - - - - 0.820 - - UDP glycosyltransferase 8-like
80. SRR ENSGALG00000003155 93 0.819 - - - - - - - - - 0.819 serine racemase [Source:HGNC Symbol;Acc:HGNC:14398]
81. LMBR1 ENSGALG00000030379 29 0.818 - - - - - - - - - 0.818 limb development membrane protein 1 [Source:NCBI gene;Acc:373986]
82. STK17A ENSGALG00000031117 454 0.817 - - - - - - - 0.817 - - serine/threonine kinase 17a [Source:NCBI gene;Acc:420775]
83. ASB3 ENSGALG00000008176 5422 0.817 - - - - - - - - 0.817 - ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]
84. PDE3A ENSGALG00000013143 28 0.816 - - - - - - - - - 0.816 phosphodiesterase 3A [Source:HGNC Symbol;Acc:HGNC:8778]
85. NUDT13 ENSGALG00000004319 341 0.816 - - - - - - - 0.816 - - nudix hydrolase 13 [Source:HGNC Symbol;Acc:HGNC:18827]
86. CRAT ENSGALG00000037443 78 0.816 - - - - - - - - - 0.816 carnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]
87. HSPB8 ENSGALG00000007383 5333 0.816 - - - - - - - 0.816 - - heat shock protein family B (small) member 8 [Source:HGNC Symbol;Acc:HGNC:30171]
88. TPGS1 ENSGALG00000026780 688 0.814 - - - - - - - - - 0.814 tubulin polyglutamylase complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:25058]
89. SGK3 ENSGALG00000043570 2045 0.814 - - - - - - - 0.814 - - serum/glucocorticoid regulated kinase family member 3 [Source:NCBI gene;Acc:420167]
90. KLF8 ENSGALG00000007570 1651 0.814 - - - - - - - 0.814 - - Kruppel-like factor 8, transcript variant X6
91. TRAF-5 TRAF-5 102 0.814 - - - - - - - - - 0.814
92. ATF2 ENSGALG00000009287 73 0.812 - - - - - - - - - 0.812 activating transcription factor 2 [Source:NCBI gene;Acc:395727]
93. DMXL1 ENSGALG00000002227 88 0.812 - - - - - - - - - 0.812 Dmx like 1 [Source:HGNC Symbol;Acc:HGNC:2937]
94. SGOL1 SGOL1 3919 0.812 - - - - - - - - 0.812 -
95. BAAT ENSGALG00000040619 579 0.811 - - - - - - - 0.811 - - bile acid-CoA:amino acid N-acyltransferase [Source:HGNC Symbol;Acc:HGNC:932]
96. CDX1 ENSGALG00000005679 461 0.811 - - - - - - - 0.811 - - caudal type homeobox 1 [Source:NCBI gene;Acc:395397]
97. RAD17 ENSGALG00000015571 1374 0.811 - - - - - - - 0.811 - - RAD17 checkpoint clamp loader component [Source:NCBI gene;Acc:404778]
98. LGR5 ENSGALG00000010163 2931 0.811 - - - - - - - 0.811 - - leucine rich repeat containing G protein-coupled receptor 5 [Source:HGNC Symbol;Acc:HGNC:4504]
99. MATR3 ENSGALG00000002478 12793 0.811 - - - - - - - - - 0.811 matrin 3 [Source:NCBI gene;Acc:373948]
100. MYH11 ENSGALG00000006520 166 0.81 - - - - - - - - - 0.810 myosin, heavy chain 11, smooth muscle [Source:NCBI gene;Acc:396211]

There are 364 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA