Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PTPRF

Gene Name Gene ID Reads Annotation
PTPRF ENSGALG00000010053 27 protein tyrosine phosphatase, receptor type F [Source:HGNC Symbol;Acc:HGNC:9670]











Genes with expression patterns similar to PTPRF

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTPRF ENSGALG00000010053 27 6 - - 1.000 1.000 1.000 1.000 - 1.000 - 1.000 protein tyrosine phosphatase, receptor type F [Source:HGNC Symbol;Acc:HGNC:9670]
2. FASTK ENSGALG00000033058 21 1.741 - - 0.958 - 0.783 - - - - - Fas activated serine/threonine kinase
3. ENSGALG00000022892 ENSGALG00000022892 3 1.731 - - - - - 0.975 - 0.756 - -
4. TMEM161B ENSGALG00000010896 36 1.709 - - - - 0.709 - - 1.000 - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
5. AOX1 ENSGALG00000008185 14 1.702 - - 0.978 - - - - 0.724 - - aldehyde oxidase 1 [Source:NCBI gene;Acc:424071]
6. DAPP1 ENSGALG00000043681 426 1.518 - - 0.786 - - 0.732 - - - - dual adaptor of phosphotyrosine and 3-phosphoinositides [Source:NCBI gene;Acc:425211]
7. FBXW4 ENSGALG00000043428 300 1.504 - - 0.785 - - 0.719 - - - - F-box and WD repeat domain containing 4 [Source:HGNC Symbol;Acc:HGNC:10847]
8. PCDH10 ENSGALG00000009719 483 1.49 - - 0.751 - - 0.739 - - - - protocadherin 10 [Source:NCBI gene;Acc:408048]
9. FAM46C 13 1 - - - - - - - 1.000 - - family with sequence similarity 46 member C
10. ATP13A4 ENSGALG00000020827 0 1 - - - - - - - 1.000 - - ATPase 13A4 [Source:NCBI gene;Acc:424901]
11. AMZ1 ENSGALG00000004358 2 1 - - - - - - - 1.000 - - archaelysin family metallopeptidase 1
12. SLC26A2 ENSGALG00000001239 3 1 - - - - - - - 1.000 - - solute carrier family 26 member 2 [Source:HGNC Symbol;Acc:HGNC:10994]
13. IQSEC1 ENSGALG00000005042 24 1 - - - - - - - 1.000 - - IQ motif and Sec7 domain 1 [Source:HGNC Symbol;Acc:HGNC:29112]
14. TLDC2 ENSGALG00000029033 6 1 - - - - - - - 1.000 - - TBC/LysM-associated domain containing 2, transcript variant X2
15. SNORD74 SNORD74 0 1 - - - - - - - 1.000 - -
16. GFM2 ENSGALG00000014939 26 1 - - - - - - - 1.000 - - G elongation factor mitochondrial 2 [Source:HGNC Symbol;Acc:HGNC:29682]
17. OCM ENSGALG00000003462 6 1 - - - - - - - 1.000 - - oncomodulin [Source:NCBI gene;Acc:386586]
18. TLR15 ENSGALG00000008166 29 1 - - - - - - - 1.000 - - Gallus gallus toll-like receptor 15 (TLR15), mRNA. [Source:RefSeq mRNA;Acc:NM_001037835]
19. TNNC2 ENSGALG00000006835 2963 1 - - - - - - - 1.000 - - troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]
20. GKN2 ENSGALG00000039187 173 1 - - - - - - - 1.000 - - gastrokine 2 [Source:HGNC Symbol;Acc:HGNC:24588]
21. UNC5D ENSGALG00000001608 4 1 - - - - - - - 1.000 - - unc-5 netrin receptor D [Source:HGNC Symbol;Acc:HGNC:18634]
22. GALR GALR 17 1 - - - - - - - 1.000 - -
23. CD109 ENSGALG00000015910 11 1 - - - - - - - 1.000 - - CD109 molecule [Source:HGNC Symbol;Acc:HGNC:21685]
24. FAM83C ENSGALG00000031906 1 1 - - - - - - - 1.000 - - family with sequence similarity 83 member C [Source:HGNC Symbol;Acc:HGNC:16121]
25. SNORA33 SNORA33 11 1 - - - - - - - 1.000 - -
26. TRDN ENSGALG00000014848 130 1 - - - - - - - 1.000 - - triadin
27. PNMT ENSGALG00000027281 14 1 - - - - - - - 1.000 - - phenylethanolamine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:9160]
28. CCDC13 ENSGALG00000005303 13 1 - - - - - - - 1.000 - - coiled-coil domain containing 13, transcript variant X3
29. CRISPLD1 ENSGALG00000033880 64 1 - - - - - - - 1.000 - - cysteine rich secretory protein LCCL domain containing 1 [Source:NCBI gene;Acc:395369]
30. ENSGALG00000011933 ENSGALG00000011933 1 1 - - - - - - - 1.000 - -
31. RNP ENSGALG00000028991 10 1 - - - - - - - 1.000 - - renal natriuretic peptide [Source:NCBI gene;Acc:100526659]
32. CDKN1AL ENSGALG00000026896 0 1 - - - - - - - 1.000 - - cyclin dependent kinase inhibitor 1A-like, transcript variant X5
33. ENSGALG00000018431 ENSGALG00000018431 2 1 - - - - - - - 1.000 - -
34. SMOX ENSGALG00000015977 18 1 - - - - - - - 1.000 - - spermine oxidase [Source:HGNC Symbol;Acc:HGNC:15862]
35. SLC38A9 ENSGALG00000014712 16 0.988 - - 0.988 - - - - - - - solute carrier family 38 member 9 [Source:HGNC Symbol;Acc:HGNC:26907]
36. CRK ENSGALG00000002656 15 0.986 - - - - - - - 0.986 - - CRK proto-oncogene, adaptor protein [Source:NCBI gene;Acc:107054794]
37. SLC24A2 ENSGALG00000015080 54 0.986 - - - - - - - 0.986 - - solute carrier family 24 member 2 [Source:NCBI gene;Acc:414891]
38. CCDC180 109 0.986 - - - - - - - 0.986 - - coiled-coil domain containing 180
39. RASD1 ENSGALG00000004860 133 0.985 - - - - - - - 0.985 - - ras related dexamethasone induced 1 [Source:NCBI gene;Acc:416507]
40. OSGIN1 ENSGALG00000003323 7 0.978 - - 0.978 - - - - - - - oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]
41. ADCYAP1 ENSGALG00000014858 9 0.978 - - 0.978 - - - - - - - adenylate cyclase activating polypeptide 1 [Source:NCBI gene;Acc:408251]
42. LOC771308 ENSGALG00000000274 7 0.978 - - 0.978 - - - - - - - growth hormone releasing hormone receptor, transcript variant X2
43. ATMIN ENSGALG00000040475 16 0.978 - - 0.978 - - - - - - - ATM interactor [Source:HGNC Symbol;Acc:HGNC:29034]
44. MMR1L2 ENSGALG00000028357 7 0.978 - - 0.978 - - - - - - - Gallus gallus macrophage mannose receptor 1-like 2 (MMR1L2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319010]
45. TEX33 ENSGALG00000012490 11 0.978 - - 0.978 - - - - - - - testis expressed 33, transcript variant X2
46. RAB3C ENSGALG00000014726 10 0.978 - - 0.978 - - - - - - - RAB3C, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30269]
47. SGMS2 ENSGALG00000010535 42 0.978 - - 0.978 - - - - - - - sphingomyelin synthase 2 [Source:NCBI gene;Acc:422529]
48. FAR-2 FAR-2 24 0.976 - - 0.976 - - - - - - -
49. ITK ENSGALG00000003857 1 0.975 - - - - - 0.975 - - - - IL2 inducible T cell kinase [Source:HGNC Symbol;Acc:HGNC:6171]
50. PCBP3 ENSGALG00000004394 5 0.975 - - - - - 0.975 - - - - poly(rC) binding protein 3, transcript variant X32
51. PROZ ENSGALG00000016832 6 0.975 - - - - - 0.975 - - - - protein Z, vitamin K dependent plasma glycoprotein [Source:HGNC Symbol;Acc:HGNC:9460]
52. PARM1 ENSGALG00000010268 13 0.975 - - - - - 0.975 - - - - prostate androgen-regulated mucin-like protein 1 [Source:HGNC Symbol;Acc:HGNC:24536]
53. ENSGALG00000021716 ENSGALG00000021716 5 0.975 - - - - - 0.975 - - - -
54. KIAA1024L ENSGALG00000027692 20 0.975 - - - - - 0.975 - - - - KIAA1024 like [Source:HGNC Symbol;Acc:HGNC:33914]
55. ENSGALG00000019491 ENSGALG00000019491 1 0.975 - - - - - 0.975 - - - -
56. MATK ENSGALG00000000736 4 0.975 - - - - - 0.975 - - - - megakaryocyte-associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:6906]
57. TSGA10 ENSGALG00000016757 4 0.975 - - - - - 0.975 - - - - testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]
58. MYO5C ENSGALG00000033198 36 0.975 - - - - - 0.975 - - - - myosin VC [Source:HGNC Symbol;Acc:HGNC:7604]
59. KIAA2013 ENSGALG00000004533 8 0.975 - - - - - 0.975 - - - - KIAA2013 [Source:HGNC Symbol;Acc:HGNC:28513]
60. ELFN2 ENSGALG00000012446 11 0.975 - - 0.975 - - - - - - - extracellular leucine rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29396]
61. OMG ENSGALG00000005594 3 0.975 - - - - - 0.975 - - - - oligodendrocyte myelin glycoprotein [Source:HGNC Symbol;Acc:HGNC:8135]
62. ENSGALG00000027565 ENSGALG00000027565 2 0.975 - - - - - 0.975 - - - -
63. PCGF2 ENSGALG00000018815 38 0.975 - - - - - 0.975 - - - - polycomb group ring finger 2 [Source:NCBI gene;Acc:425919]
64. CASP10 ENSGALG00000046494 2 0.975 - - - - - 0.975 - - - - caspase 10 [Source:HGNC Symbol;Acc:HGNC:1500]
65. RGS13 ENSGALG00000026810 8 0.975 - - - - - 0.975 - - - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
66. B3GALT1 ENSGALG00000010931 6 0.975 - - - - - 0.975 - - - - beta-1,3-galactosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:916]
67. CLDN15 ENSGALG00000038964 21 0.974 - - 0.974 - - - - - - - claudin 15, transcript variant X4
68. FGF7 ENSGALG00000028158 189 0.971 - - 0.971 - - - - - - - fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
69. PTPRE ENSGALG00000009823 250 0.97 - - 0.970 - - - - - - - protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
70. SCG2 ENSGALG00000029819 26 0.965 - - 0.965 - - - - - - - secretogranin II [Source:HGNC Symbol;Acc:HGNC:10575]
71. KLF4 ENSGALG00000026928 184 0.965 - - - - - 0.965 - - - - Kruppel like factor 4 [Source:HGNC Symbol;Acc:HGNC:6348]
72. ENSGALG00000026496 ENSGALG00000026496 9 0.964 - - 0.964 - - - - - - -
73. ENSGALG00000024048 ENSGALG00000024048 50 0.962 - - 0.962 - - - - - - -
74. C1QTNF6 ENSGALG00000027067 493 0.955 - - - - - 0.955 - - - - C1q and TNF related 6 [Source:HGNC Symbol;Acc:HGNC:14343]
75. INTS6L ENSGALG00000006157 2303 0.954 - - - - - 0.954 - - - - integrator complex subunit 6 like, transcript variant X6
76. SENP7 ENSGALG00000044642 48 0.953 - - - - - 0.953 - - - - SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
77. TMEM45BL ENSGALG00000024296 5 0.952 - - - - - 0.952 - - - - transmembrane protein 45B-like
78. CD44 ENSGALG00000039080 100 0.951 - - 0.951 - - - - - - - CD44 molecule (Indian blood group) [Source:NCBI gene;Acc:395666]
79. SLC4A10 ENSGALG00000030032 56 0.951 - - 0.951 - - - - - - - solute carrier family 4 member 10 [Source:HGNC Symbol;Acc:HGNC:13811]
80. TRIM29 ENSGALG00000042360 34 0.949 - - 0.949 - - - - - - - tripartite motif containing 29 [Source:HGNC Symbol;Acc:HGNC:17274]
81. ADAMTS12 55 0.946 - - 0.946 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
82. SK2 SK2 74 0.944 - - 0.944 - - - - - - -
83. ABHD10 ENSGALG00000015378 12 0.943 - - - - - 0.943 - - - - abhydrolase domain containing 10 [Source:HGNC Symbol;Acc:HGNC:25656]
84. XK ENSGALG00000016262 60 0.943 - - 0.943 - - - - - - - X-linked Kx blood group [Source:NCBI gene;Acc:427991]
85. FBXO18 35 0.942 - - - - - - - 0.942 - - F-box protein, helicase, 18, transcript variant X4
86. CLN5 ENSGALG00000016917 386 0.942 - - - - - - - 0.942 - - CLN5, intracellular trafficking protein [Source:NCBI gene;Acc:101752092]
87. ENSGALG00000028962 ENSGALG00000028962 7 0.942 - - - - - 0.942 - - - -
88. ENSGALG00000026155 ENSGALG00000026155 49 0.942 - - - - - 0.942 - - - -
89. PARK2 166 0.939 - - 0.939 - - - - - - - parkin RBR E3 ubiquitin protein ligase
90. ENSGALG00000004951 ENSGALG00000004951 18 0.937 - - 0.937 - - - - - - -
91. S100A13 ENSGALG00000046614 201 0.933 - - 0.933 - - - - - - - S100 calcium binding protein A13 [Source:HGNC Symbol;Acc:HGNC:10490]
92. RUNDC3B ENSGALG00000008954 924 0.931 - - - - - 0.931 - - - - RUN domain containing 3B [Source:NCBI gene;Acc:420535]
93. MAN1B1 ENSGALG00000037375 308 0.929 - - 0.929 - - - - - - - mannosidase alpha class 1B member 1 [Source:HGNC Symbol;Acc:HGNC:6823]
94. INSRR ENSGALG00000013253 54 0.928 - - - - - 0.928 - - - - insulin receptor related receptor [Source:HGNC Symbol;Acc:HGNC:6093]
95. KIAA1045 KIAA1045 23 0.927 - - - - - 0.927 - - - -
96. ALOX5 ENSGALG00000005857 73 0.925 - - 0.925 - - - - - - - arachidonate 5-lipoxygenase [Source:HGNC Symbol;Acc:HGNC:435]
97. MTOR ENSGALG00000003339 328 0.919 - - 0.919 - - - - - - - mechanistic target of rapamycin kinase [Source:HGNC Symbol;Acc:HGNC:3942]
98. ATP13A2 ENSGALG00000003774 271 0.918 - - - - - 0.918 - - - - ATPase 13A2 [Source:NCBI gene;Acc:419466]
99. CNTF ENSGALG00000026207 47 0.918 - - - - - 0.918 - - - - ciliary neurotrophic factor [Source:NCBI gene;Acc:396488]
100. C16orf72 ENSGALG00000007291 228 0.914 - - 0.914 - - - - - - - chromosome 16 open reading frame 72 [Source:HGNC Symbol;Acc:HGNC:30103]

There are 266 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA