Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PTPRE

Gene Name Gene ID Reads Annotation
PTPRE ENSGALG00000009823 250 protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]











Genes with expression patterns similar to PTPRE

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTPRE ENSGALG00000009823 250 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
2. ADAMTS12 55 1.958 - - 0.964 - - - - - - 0.994 ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
3. TYSND1 ENSGALG00000033807 716 1.828 - - 0.847 - - - - - - 0.981 trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
4. NFKBIE ENSGALG00000044525 633 1.731 - - 0.743 - - - - - - 0.988 NFKB inhibitor epsilon [Source:HGNC Symbol;Acc:HGNC:7799]
5. RPGR ENSGALG00000036284 186 1.709 - - 0.771 - - - - - - 0.938 retinitis pigmentosa GTPase regulator [Source:HGNC Symbol;Acc:HGNC:10295]
6. ROBO1 ENSGALG00000015511 213 1.686 - - 0.834 - - - - - - 0.852 roundabout guidance receptor 1 [Source:HGNC Symbol;Acc:HGNC:10249]
7. ENSGALG00000024104 ENSGALG00000024104 1051 1.667 - - 0.794 - - - - - - 0.873
8. HS6ST1 ENSGALG00000002155 533 1.659 - - 0.736 - - - - - - 0.923 heparan sulfate 6-O-sulfotransferase 1 [Source:NCBI gene;Acc:395141]
9. SAP130 ENSGALG00000002070 9814 1.457 - - 0.717 - - - - - - 0.740 Sin3A associated protein 130 [Source:NCBI gene;Acc:424756]
10. TM6SF2 ENSGALG00000029015 109 0.995 - - - - - - - - - 0.995 transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
11. CNKSR3 ENSGALG00000027159 41 0.994 - - - - - - - - - 0.994 CNKSR family member 3, transcript variant X2
12. MAP3K8 ENSGALG00000007356 188 0.994 - - - - - - - - - 0.994 mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
13. DTX2 ENSGALG00000001905 1475 0.993 - - - - - - - - - 0.993 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
14. SGMS2 ENSGALG00000010535 42 0.993 - - 0.993 - - - - - - - sphingomyelin synthase 2 [Source:NCBI gene;Acc:422529]
15. UBE3C ENSGALG00000006461 57 0.993 - - - - - - - - - 0.993 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
16. RAB3C ENSGALG00000014726 10 0.993 - - 0.993 - - - - - - - RAB3C, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30269]
17. TEX33 ENSGALG00000012490 11 0.993 - - 0.993 - - - - - - - testis expressed 33, transcript variant X2
18. SOS2 ENSGALG00000012273 41 0.993 - - - - - - - - - 0.993 SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
19. MMR1L2 ENSGALG00000028357 7 0.993 - - 0.993 - - - - - - - Gallus gallus macrophage mannose receptor 1-like 2 (MMR1L2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319010]
20. LOC771308 ENSGALG00000000274 7 0.993 - - 0.993 - - - - - - - growth hormone releasing hormone receptor, transcript variant X2
21. ATMIN ENSGALG00000040475 16 0.993 - - 0.993 - - - - - - - ATM interactor [Source:HGNC Symbol;Acc:HGNC:29034]
22. ENSGALG00000008594 ENSGALG00000008594 54 0.993 - - - - - - - - - 0.993
23. AOX1 ENSGALG00000008185 14 0.993 - - 0.993 - - - - - - - aldehyde oxidase 1 [Source:NCBI gene;Acc:424071]
24. ADCYAP1 ENSGALG00000014858 9 0.993 - - 0.993 - - - - - - - adenylate cyclase activating polypeptide 1 [Source:NCBI gene;Acc:408251]
25. OSGIN1 ENSGALG00000003323 7 0.993 - - 0.993 - - - - - - - oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]
26. FAR-2 FAR-2 24 0.992 - - 0.992 - - - - - - -
27. ATP2B2 ENSGALG00000030908 584 0.992 - - - - - - - - - 0.992 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
28. ZFPM2 ENSGALG00000040079 942 0.991 - - - - - - - - - 0.991 zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
29. ENSGALG00000018358 ENSGALG00000018358 101 0.991 - - - - - - - - - 0.991
30. ELFN2 ENSGALG00000012446 11 0.991 - - 0.991 - - - - - - - extracellular leucine rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29396]
31. ENSGALG00000004772 ENSGALG00000004772 173 0.991 - - - - - - - - - 0.991
32. CLDN15 ENSGALG00000038964 21 0.991 - - 0.991 - - - - - - - claudin 15, transcript variant X4
33. AGMO ENSGALG00000010792 76 0.99 - - - - - - - - - 0.990 alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
34. TTI1 ENSGALG00000006791 1218 0.99 - - - - - - - - - 0.990 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
35. STX6 3297 0.989 - - - - - - - - - 0.989 syntaxin 6
36. SLC38A1 ENSGALG00000009698 566 0.989 - - - - - - - - - 0.989 solute carrier family 38 member 1 [Source:NCBI gene;Acc:417806]
37. MAP3K3 ENSGALG00000000525 115 0.989 - - - - - - - - - 0.989 mitogen-activated protein kinase kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6855]
38. RGP1 ENSGALG00000002394 5937 0.988 - - - - - - - - - 0.988 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
39. TFG ENSGALG00000015299 849 0.987 - - - - - - - - - 0.987 TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
40. PROCR ENSGALG00000006547 645 0.987 - - - - - - - - - 0.987 protein C receptor [Source:NCBI gene;Acc:424867]
41. FGF7 ENSGALG00000028158 189 0.987 - - 0.987 - - - - - - - fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
42. GPR114 GPR114 46 0.986 - - - - - - - - - 0.986
43. BCOR ENSGALG00000016245 85 0.986 - - - - - - - - - 0.986 BCL6 corepressor, transcript variant X8
44. GRPEL2 ENSGALG00000002673 105 0.986 - - - - - - - - - 0.986 GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
45. ENSGALG00000027621 ENSGALG00000027621 863 0.986 - - - - - - - - - 0.986
46. PRICKLE1 ENSGALG00000009556 60 0.983 - - - - - - - - - 0.983 prickle planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:17019]
47. SERPINB6 ENSGALG00000012866 1582 0.983 - - - - - - - - - 0.983 serpin family B member 6 [Source:NCBI gene;Acc:420895]
48. CCBL2 CCBL2 184 0.982 - - - - - - - - - 0.982
49. VAV2 ENSGALG00000002699 503 0.982 - - - - - - - - - 0.982 vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]
50. SCG2 ENSGALG00000029819 26 0.982 - - 0.982 - - - - - - - secretogranin II [Source:HGNC Symbol;Acc:HGNC:10575]
51. ENSGALG00000026496 ENSGALG00000026496 9 0.981 - - 0.981 - - - - - - -
52. RP9 ENSGALG00000035453 1186 0.98 - - - - - - - - - 0.980 retinitis pigmentosa 9 (autosomal dominant)
53. TRIM3 ENSGALG00000034004 110 0.979 - - - - - - - - - 0.979 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
54. SLC38A9 ENSGALG00000014712 16 0.979 - - 0.979 - - - - - - - solute carrier family 38 member 9 [Source:HGNC Symbol;Acc:HGNC:26907]
55. PCMTD2 ENSGALG00000005901 1833 0.978 - - - - - - - - - 0.978 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
56. TRIP4 ENSGALG00000030672 1255 0.978 - - - - - - - - - 0.978 thyroid hormone receptor interactor 4 [Source:HGNC Symbol;Acc:HGNC:12310]
57. FASTK ENSGALG00000033058 21 0.978 - - 0.978 - - - - - - - Fas activated serine/threonine kinase
58. PDCD7 ENSGALG00000021027 3807 0.977 - - - - - - - - - 0.977 programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
59. FOXP1 127 0.977 - - - - - - - - - 0.977 forkhead box P1, transcript variant X14
60. RPRD2 ENSGALG00000014656 939 0.976 - - - - - - - - - 0.976 regulation of nuclear pre-mRNA domain containing 2 [Source:NCBI gene;Acc:425074]
61. ENSGALG00000004643 ENSGALG00000004643 2297 0.976 - - - - - - - - - 0.976
62. CTK-1 CTK-1 1618 0.975 - - - - - - - - - 0.975
63. ZNF142 ENSGALG00000011393 2078 0.975 - - - - - - - - - 0.975 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
64. IFNAR2 ENSGALG00000041867 1596 0.975 - - - - - - - - - 0.975 interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
65. PMVK ENSGALG00000046656 645 0.975 - - - - - - - - - 0.975 phosphomevalonate kinase [Source:HGNC Symbol;Acc:HGNC:9141]
66. ENSGALG00000004951 ENSGALG00000004951 18 0.975 - - 0.975 - - - - - - -
67. CENPJ ENSGALG00000017148 1415 0.974 - - - - - - - - - 0.974 centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
68. SHPK ENSGALG00000004637 2386 0.974 - - - - - - - - - 0.974 sedoheptulokinase, transcript variant X1
69. SLC4A10 ENSGALG00000030032 56 0.974 - - 0.974 - - - - - - - solute carrier family 4 member 10 [Source:HGNC Symbol;Acc:HGNC:13811]
70. TRMT44 ENSGALG00000015594 1490 0.973 - - - - - - - - - 0.973 tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
71. ENSGALG00000001919 ENSGALG00000001919 531 0.973 - - - - - - - - - 0.973
72. TRIM24 ENSGALG00000012823 2725 0.973 - - - - - - - - - 0.973 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
73. C5orf24 ENSGALG00000006371 1573 0.972 - - - - - - - - - 0.972 chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
74. FN3K ENSGALG00000001531 208 0.971 - - - - - - - - - 0.971 fructosamine 3 kinase [Source:HGNC Symbol;Acc:HGNC:24822]
75. SUPV3L1 ENSGALG00000004197 4141 0.971 - - - - - - - - - 0.971 Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
76. PTPRF ENSGALG00000010053 27 0.97 - - 0.970 - - - - - - - protein tyrosine phosphatase, receptor type F [Source:HGNC Symbol;Acc:HGNC:9670]
77. PRR11 2624 0.97 - - - - - - - - - 0.970 proline rich 11, transcript variant X8
78. EEA1 ENSGALG00000011280 923 0.969 - - - - - - - - - 0.969 early endosome antigen 1 [Source:HGNC Symbol;Acc:HGNC:3185]
79. USP36 ENSGALG00000037018 783 0.969 - - - - - - - - - 0.969 ubiquitin specific peptidase 36 [Source:HGNC Symbol;Acc:HGNC:20062]
80. FTSJ3 ENSGALG00000032993 8929 0.968 - - - - - - - - - 0.968 FtsJ RNA methyltransferase homolog 3 [Source:NCBI gene;Acc:419943]
81. CEP57 ENSGALG00000017201 524 0.968 - - - - - - - - - 0.968 centrosomal protein 57 [Source:HGNC Symbol;Acc:HGNC:30794]
82. LUZP1 ENSGALG00000025858 947 0.967 - - - - - - - - - 0.967 leucine zipper protein 1 [Source:HGNC Symbol;Acc:HGNC:14985]
83. BZFP1 ENSGALG00000027546 632 0.967 - - - - - - - - - 0.967 B-locus zinc finger protein 1 [Source:NCBI gene;Acc:396247]
84. PDCD4 ENSGALG00000008700 574 0.967 - - - - - - - - - 0.967 programmed cell death 4 [Source:NCBI gene;Acc:374191]
85. TNFRSF21 ENSGALG00000016719 2762 0.967 - - - - - - - - - 0.967 TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
86. TRIM29 ENSGALG00000042360 34 0.967 - - 0.967 - - - - - - - tripartite motif containing 29 [Source:HGNC Symbol;Acc:HGNC:17274]
87. RFWD3 2315 0.966 - - - - - - - - - 0.966 ring finger and WD repeat domain 3
88. MASP1 ENSGALG00000007419 141 0.965 - - - - - - - - - 0.965 mannan binding lectin serine peptidase 1 [Source:NCBI gene;Acc:407088]
89. FAM83D ENSGALG00000039047, ENSGALG00000044404 297 0.965 - - - - - - - - - 0.965 family with sequence similarity 83, member D
90. ELL2 ENSGALG00000014678 1111 0.964 - - - - - - - - - 0.964 elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
91. RASSF8 ENSGALG00000014041 850 0.964 - - - - - - - - - 0.964 Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
92. MITF ENSGALG00000039583 865 0.964 - - - - - - - - - 0.964 melanogenesis associated transcription factor [Source:NCBI gene;Acc:395886]
93. PKDCCB ENSGALG00000011166 74 0.962 - - - - - - - - - 0.962 protein kinase domain containing, cytoplasmic b
94. SK2 SK2 74 0.962 - - 0.962 - - - - - - -
95. PARK2 166 0.96 - - 0.960 - - - - - - - parkin RBR E3 ubiquitin protein ligase
96. PIGW ENSGALG00000023554 951 0.96 - - - - - - - - - 0.960 phosphatidylinositol glycan anchor biosynthesis class W [Source:HGNC Symbol;Acc:HGNC:23213]
97. OBFC1 OBFC1 1071 0.958 - - - - - - - - - 0.958
98. EP3 EP3 741 0.958 - - - - - - - - - 0.958
99. FBXL2 ENSGALG00000030175 157 0.958 - - - - - - - - - 0.958 F-box and leucine rich repeat protein 2 [Source:HGNC Symbol;Acc:HGNC:13598]
100. NHLRC2 ENSGALG00000008946 387 0.957 - - - - - - - - - 0.957 NHL repeat containing 2 [Source:NCBI gene;Acc:423903]

There are 498 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA