Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PTPRD

Gene Name Gene ID Reads Annotation
PTPRD ENSGALG00000015058 37 protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]











Genes with expression patterns similar to PTPRD

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTPRD ENSGALG00000015058 37 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]
2. SULT1B ENSGALG00000023122 7 1.856 - - - - - 0.856 1.000 - - - sulfotransferase family, cytosolic, 1B [Source:NCBI gene;Acc:422661]
3. ENSGALG00000019053 ENSGALG00000019053 8 1.847 - - - - - - - 0.965 - 0.882
4. GPR61 ENSGALG00000040168 70 1.782 - - - - - - - 0.952 - 0.830 G protein-coupled receptor 61 [Source:HGNC Symbol;Acc:HGNC:13300]
5. DSC1 ENSGALG00000015140 16 1.656 - - - - - 0.856 - 0.800 - - desmocollin 1, transcript variant X1
6. SYNPO2L ENSGALG00000005207 60 1.648 - - - - - 0.856 - - - 0.792 synaptopodin 2 like [Source:HGNC Symbol;Acc:HGNC:23532]
7. COL11A1 ENSGALG00000005180 244 1.621 - - - 0.795 - - - - - 0.826 collagen type XI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2186]
8. VPAC2 VPAC2 45 1.614 - - 0.817 0.797 - - - - - -
9. ARHGEF37 ENSGALG00000039652 28 1.581 - - - - - 0.704 - 0.877 - - Rho guanine nucleotide exchange factor 37 [Source:HGNC Symbol;Acc:HGNC:34430]
10. INPP4A ENSGALG00000029709 48 1.58 - - - - 0.708 - - 0.872 - - inositol polyphosphate-4-phosphatase type I A [Source:HGNC Symbol;Acc:HGNC:6074]
11. ABCB7 ENSGALG00000007788 170 1.571 - - - - - - 0.724 0.847 - - ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
12. ZSWIM6 ENSGALG00000014734 7 1.552 - - - 0.797 - - - - - 0.755 zinc finger SWIM-type containing 6, transcript variant X2
13. SLC29A4 ENSGALG00000010497 43 1.523 - - - 0.749 - - - - - 0.774 solute carrier family 29 member 4 [Source:HGNC Symbol;Acc:HGNC:23097]
14. SAMD3 ENSGALG00000032409 459 1.498 - - - 0.719 - - - - - 0.779 sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21574]
15. ENSGALG00000026418 ENSGALG00000026418 2 1 - - - - - - 1.000 - - -
16. MYNN ENSGALG00000009409 11 1 - - - - - - 1.000 - - - myoneurin [Source:HGNC Symbol;Acc:HGNC:14955]
17. SEMA4D ENSGALG00000010697 10 1 - - - - - - 1.000 - - - semaphorin 4D [Source:NCBI gene;Acc:396331]
18. CLCNKB ENSGALG00000003713 27 1 - - - - - - 1.000 - - - chloride voltage-gated channel Kb, transcript variant X3
19. PI15 ENSGALG00000029264 21 1 - - - - - - 1.000 - - - peptidase inhibitor 15 [Source:NCBI gene;Acc:374241]
20. SLC44A1 ENSGALG00000015439 32 1 - - - - - - 1.000 - - - solute carrier family 44 member 1 [Source:HGNC Symbol;Acc:HGNC:18798]
21. uc_6 uc_6 14 1 - - - - - - 1.000 - - -
22. KIAA1377 KIAA1377 48 1 - - - - - - 1.000 - - -
23. PIK3R4 ENSGALG00000040917 10 1 - - - - - - 1.000 - - - phosphoinositide-3-kinase regulatory subunit 4 [Source:HGNC Symbol;Acc:HGNC:8982]
24. DRG11 DRG11 32 1 - - - - - - 1.000 - - -
25. LOC422320 ENSGALG00000007703 6 1 - - - - - - 1.000 - - - ligand of Numb protein X 2-like, transcript variant X1
26. PLCZ1 ENSGALG00000013123 3 1 - - - - - - 1.000 - - - phospholipase C zeta 1 [Source:NCBI gene;Acc:418182]
27. STRADB ENSGALG00000008373 10 1 - - - - - - 1.000 - - - STE20-related kinase adaptor beta [Source:HGNC Symbol;Acc:HGNC:13205]
28. PAPPA ENSGALG00000007079 6 1 - - - - - - 1.000 - - - pappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]
29. PFKFB4 ENSGALG00000002099, ENSGALG00000032385 30 1 - - - - - - 1.000 - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 [Source:HGNC Symbol;Acc:HGNC:8875]
30. PCDHA11 58 1 - - - - - - 1.000 - - - protocadherin alpha 11
31. FAM83H ENSGALG00000033118 50 1 - - - - - - 1.000 - - - family with sequence similarity 83 member H [Source:HGNC Symbol;Acc:HGNC:24797]
32. MAP2K1 ENSGALG00000007687 250 1 - - - - - - 1.000 - - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
33. HOXB13 ENSGALG00000033154 71 1 - - - - - - 1.000 - - - homeobox B13 [Source:HGNC Symbol;Acc:HGNC:5112]
34. CNKSR3 ENSGALG00000027159 41 1 - - - - - - 1.000 - - - CNKSR family member 3, transcript variant X2
35. CDH20 ENSGALG00000012906 2 1 - - - - - - 1.000 - - - cadherin 20, type 2 [Source:NCBI gene;Acc:373927]
36. BROX ENSGALG00000009413 15 1 - - - - - - 1.000 - - - BRO1 domain and CAAX motif containing [Source:HGNC Symbol;Acc:HGNC:26512]
37. SNCB ENSGALG00000021542 19 1 - - - - - - 1.000 - - - synuclein beta [Source:NCBI gene;Acc:395391]
38. C2CD3 ENSGALG00000017314 13 1 - - - - - - 1.000 - - - C2 calcium dependent domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24564]
39. DMB1 ENSGALG00000000162 7 1 - - - - - - 1.000 - - - major histocompatibility complex, class II, DM beta 1 [Source:NCBI gene;Acc:106182184]
40. RGS13 ENSGALG00000026810 8 1 - - - - - - 1.000 - - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
41. DSG2 ENSGALG00000015142 67 1 - - - - - - 1.000 - - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
42. TUSC5 15 1 - - - - - - 1.000 - - - tumor suppressor candidate 5
43. GRHL3 ENSGALG00000004249 1 1 - - - - - - 1.000 - - - grainyhead like transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:25839]
44. GABARAPL3 GABARAPL3 32 1 - - - - - - 1.000 - - -
45. MIER3 ENSGALG00000014721 57 1 - - - - - - 1.000 - - - MIER family member 3, transcript variant X6
46. ENSGALG00000007388 ENSGALG00000007388 41 1 - - - - - - 1.000 - - -
47. STEAP4 ENSGALG00000008997 8 1 - - - - - - 1.000 - - - STEAP4 metalloreductase [Source:HGNC Symbol;Acc:HGNC:21923]
48. HAVCR1 ENSGALG00000017362 25 0.984 - - - - - - - 0.984 - - hepatitis A virus cellular receptor 1 [Source:NCBI gene;Acc:416249]
49. ABCA8 ENSGALG00000021399 11 0.974 - - - - - - - 0.974 - - ATP binding cassette subfamily A member 8
50. MAPT ENSGALG00000000625 659 0.971 - - - - - - - 0.971 - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
51. ICOS ENSGALG00000008656 27 0.966 - - - - - - - 0.966 - - inducible T cell costimulator [Source:NCBI gene;Acc:424105]
52. STAB1 21 0.965 - - - - - - - 0.965 - - stabilin 1, transcript variant X2
53. GFAP ENSGALG00000000909 21 0.965 - - - - - - - 0.965 - - glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
54. PLB1 PLB1 101 0.965 - - - - - - - 0.965 - -
55. FOXP4 ENSGALG00000033497 13 0.965 - - - - - - - 0.965 - - forkhead box P4 [Source:HGNC Symbol;Acc:HGNC:20842]
56. USP53 ENSGALG00000011990 12 0.965 - - - - - - - 0.965 - - ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:HGNC:29255]
57. CCDC96 9 0.965 - - - - - - - 0.965 - - coiled-coil domain containing 96
58. APOAIV APOAIV 5 0.965 - - - - - - - 0.965 - -
59. GINS3 ENSGALG00000031209 32 0.965 - - - - - - - 0.965 - - GINS complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25851]
60. SDR42E2 ENSGALG00000006964 57 0.965 - - - - - - - 0.965 - - short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]
61. KIAA0513 ENSGALG00000025938 46 0.962 - - - - - - - 0.962 - - KIAA0513 [Source:HGNC Symbol;Acc:HGNC:29058]
62. TMCO4 ENSGALG00000004081 31 0.962 - - - - - - - 0.962 - - transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
63. KRT20 ENSGALG00000019716 11 0.961 - - - - - - - 0.961 - - keratin 20 [Source:NCBI gene;Acc:420045]
64. CD4 ENSGALG00000014477 19 0.96 - - - - - - - 0.960 - - CD4 molecule [Source:NCBI gene;Acc:395362]
65. INA ENSGALG00000028238 208 0.958 - - - - - - - 0.958 - - internexin neuronal intermediate filament protein alpha
66. ANKRD44 ENSGALG00000007996 17 0.956 - - - - - - - 0.956 - - ankyrin repeat domain 44 [Source:NCBI gene;Acc:424055]
67. DNAI2 ENSGALG00000004495 45 0.955 - - - - - - - 0.955 - - dynein axonemal intermediate chain 2
68. KLRD1 ENSGALG00000014722 27 0.952 - - - - - - - 0.952 - - killer cell lectin like receptor D1 [Source:NCBI gene;Acc:769174]
69. RIPK4 ENSGALG00000040189 102 0.951 - - - - - - - 0.951 - - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
70. ZIC3 ENSGALG00000031144 863 0.949 - - - - - - - 0.949 - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
71. AQP12 AQP12 11 0.948 - - - - - - - 0.948 - -
72. PAK2 ENSGALG00000006426 283 0.944 - - - - - - - 0.944 - - p21 (RAC1) activated kinase 2 [Source:HGNC Symbol;Acc:HGNC:8591]
73. DZANK1 ENSGALG00000008731 120 0.944 - - - - - - - 0.944 - - double zinc ribbon and ankyrin repeat domains 1 [Source:NCBI gene;Acc:416722]
74. NXPH2 ENSGALG00000029083 353 0.942 - - - - - - - 0.942 - - neurexophilin 2 [Source:HGNC Symbol;Acc:HGNC:8076]
75. VSTM2L ENSGALG00000006792 11 0.939 - - 0.939 - - - - - - - V-set and transmembrane domain containing 2 like [Source:HGNC Symbol;Acc:HGNC:16096]
76. IRG1 IRG1 21 0.939 - - - - - - - 0.939 - -
77. EPB41L4A ENSGALG00000000234 113 0.931 - - - - - - - 0.931 - - erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
78. ENPP3 ENSGALG00000037587 25 0.931 - - - - - - - 0.931 - - ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:3358]
79. LOC417973 ENSGALG00000019325 9 0.929 - - - - - - - 0.929 - - uncharacterized LOC417973, transcript variant X1
80. LEPRE1 LEPRE1 156 0.928 - - - - - - - - - 0.928
81. ABCC4 ENSGALG00000016896 154 0.928 - - - - - - - 0.928 - - ATP binding cassette subfamily C member 4 [Source:NCBI gene;Acc:418791]
82. TRAF-5 TRAF-5 102 0.928 - - - - - - - 0.928 - -
83. SMYD1 ENSGALG00000015935 75 0.923 - - - - - - - 0.923 - - SET and MYND domain containing 1 [Source:NCBI gene;Acc:373960]
84. C1QTNF6 ENSGALG00000027067 493 0.921 - - - - - - - 0.921 - - C1q and TNF related 6 [Source:HGNC Symbol;Acc:HGNC:14343]
85. ENSGALG00000019522 ENSGALG00000019522 122 0.92 - - - - - - - 0.920 - -
86. ENSGALG00000023731 ENSGALG00000023731 149 0.917 - - - - - - - 0.917 - -
87. NRIP3 ENSGALG00000005903 58 0.912 - - - - - - - 0.912 - - nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
88. ALOX5 ENSGALG00000005857 73 0.911 - - - - - 0.911 - - - - arachidonate 5-lipoxygenase [Source:HGNC Symbol;Acc:HGNC:435]
89. ENSGALG00000021882 ENSGALG00000021882 63 0.907 - - - - - - - 0.907 - -
90. RNASET2 ENSGALG00000011426 40 0.904 - - - - - - - 0.904 - - ribonuclease T2 [Source:NCBI gene;Acc:421569]
91. PRSS35 ENSGALG00000015847 52 0.9 - - - - - - - 0.900 - - serine protease 35 [Source:HGNC Symbol;Acc:HGNC:21387]
92. RFX7 ENSGALG00000041896 69 0.896 - - - - - - - - - 0.896 regulatory factor X7 [Source:HGNC Symbol;Acc:HGNC:25777]
93. ARHGAP25 ENSGALG00000035194 74 0.896 - - - - - - - 0.896 - - Rho GTPase activating protein 25 [Source:NCBI gene;Acc:419516]
94. MMEL1 ENSGALG00000001115 46 0.894 - - - - - - - 0.894 - - membrane metalloendopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:14668]
95. CD200R1A CD200R1A 105 0.893 - - - - - - - 0.893 - -
96. STXBP1 ENSGALG00000040003 157 0.89 - - - - - - - 0.890 - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
97. TP53I3 ENSGALG00000016502 178 0.889 - - - - - - - 0.889 - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
98. ADCYAP1R1 ENSGALG00000005223 114 0.888 - - - - - - - 0.888 - - ADCYAP receptor type I [Source:NCBI gene;Acc:420386]
99. CCDC86 ENSGALG00000036935 5280 0.885 - - - - - - - 0.885 - - coiled-coil domain containing 86 [Source:HGNC Symbol;Acc:HGNC:28359]
100. ZNFX1 ENSGALG00000004859 33 0.883 - - - - - - - 0.883 - - zinc finger NFX1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:29271]

There are 297 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA