Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PTPN4

Gene Name Gene ID Reads Annotation
PTPN4 3030 protein tyrosine phosphatase, non-receptor type 4, transcript variant X2











Genes with expression patterns similar to PTPN4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTPN4 3030 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein tyrosine phosphatase, non-receptor type 4, transcript variant X2
2. PTTG1 17936 1.526 - - - - - - 0.767 0.759 - - pituitary tumor-transforming 1, transcript variant X1
3. WRB ENSGALG00000016070 5199 1.519 - - - - - - - 0.800 - 0.719 tryptophan rich basic protein [Source:NCBI gene;Acc:770415]
4. TOR1AIP1 ENSGALG00000029238 5843 1.49 - - - - - - 0.700 0.790 - - torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
5. LIMS1 ENSGALG00000029970 7244 0.913 - - - - - - - 0.913 - - LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:414880]
6. ITFG2 ENSGALG00000014335 1896 0.909 - - - - - - - 0.909 - - integrin alpha FG-GAP repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:30879]
7. SMG8 ENSGALG00000005093 5557 0.904 - - - - - - - 0.904 - - SMG8 nonsense mediated mRNA decay factor
8. ZNF384 ENSGALG00000032599 2369 0.903 - - - - - - - 0.903 - - zinc finger protein 384 [Source:NCBI gene;Acc:770350]
9. CREPT CREPT 17142 0.903 - - - - - - - 0.903 - -
10. ARID2 ENSGALG00000033074 3461 0.898 - - - - - - - 0.898 - - AT-rich interaction domain 2 [Source:HGNC Symbol;Acc:HGNC:18037]
11. RCAN3 ENSGALG00000004282 7778 0.898 - - - - - - - 0.898 - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
12. PECR ENSGALG00000011497 1714 0.897 - - - - - - - 0.897 - - peroxisomal trans-2-enoyl-CoA reductase [Source:NCBI gene;Acc:424224]
13. SLC19A1 ENSGALG00000030511 1397 0.894 - - - - - - - 0.894 - - solute carrier family 19 member 1 [Source:NCBI gene;Acc:424034]
14. TCTN2 ENSGALG00000023683 3596 0.893 - - - - - - - 0.893 - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
15. PDZD8 ENSGALG00000029095 1068 0.888 - - - - - - - 0.888 - - PDZ domain containing 8 [Source:HGNC Symbol;Acc:HGNC:26974]
16. AIP ENSGALG00000040247 4166 0.888 - - - - - - - 0.888 - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
17. ARNTL2 ENSGALG00000014096 998 0.887 - - - - - - - 0.887 - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:NCBI gene;Acc:373925]
18. PDLIM5 ENSGALG00000012211 3064 0.887 - - - - - - - 0.887 - - PDZ and LIM domain 5 [Source:NCBI gene;Acc:422699]
19. KIF21B ENSGALG00000034347 4144 0.884 - - - - - - - 0.884 - - kinesin family member 21B [Source:HGNC Symbol;Acc:HGNC:29442]
20. TXNDC11 ENSGALG00000003154 2224 0.884 - - - - - - - 0.884 - - thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
21. LRIG3 ENSGALG00000009755 6655 0.883 - - - - - - - 0.883 - - leucine rich repeats and immunoglobulin like domains 3 [Source:NCBI gene;Acc:417813]
22. MTIF2 ENSGALG00000031265 2366 0.883 - - - - - - - 0.883 - - mitochondrial translational initiation factor 2 [Source:NCBI gene;Acc:421213]
23. TAF1A ENSGALG00000009441 2431 0.882 - - - - - - - 0.882 - - TATA-box binding protein associated factor, RNA polymerase I subunit A [Source:NCBI gene;Acc:421338]
24. FGFR1 ENSGALG00000039786 4480 0.882 - - - - - - - 0.882 - - fibroblast growth factor receptor 1 [Source:NCBI gene;Acc:396516]
25. BRCA1 ENSGALG00000002781 2052 0.88 - - - - - - - 0.880 - - BRCA1, DNA repair associated [Source:NCBI gene;Acc:373983]
26. DOK5 ENSGALG00000007786 1732 0.879 - - - - - - - 0.879 - - docking protein 5 [Source:HGNC Symbol;Acc:HGNC:16173]
27. UBN1 ENSGALG00000031416 2848 0.877 - - - - - - - 0.877 - - ubinuclein 1 [Source:NCBI gene;Acc:416398]
28. CUX1_1 ENSGALG00000021636 3705 0.877 - - - - - - - 0.877 - - cut like homeobox 1 [Source:NCBI gene;Acc:101749861]
29. BUD13_1 ENSGALG00000025882 1118 0.875 - - - - - - - 0.875 - - BUD13 homolog [Source:NCBI gene;Acc:428248]
30. AGRN ENSGALG00000039193 8135 0.875 - - - - - - - 0.875 - - agrin [Source:NCBI gene;Acc:396538]
31. PNN ENSGALG00000010167 6417 0.874 - - - - - - - 0.874 - - pinin, desmosome associated protein [Source:HGNC Symbol;Acc:HGNC:9162]
32. AGGF1 ENSGALG00000004311 3011 0.873 - - - - - - - 0.873 - - angiogenic factor with G-patch and FHA domains 1, transcript variant X1
33. PCYOX1 ENSGALG00000013878 2200 0.872 - - - - - - - 0.872 - - prenylcysteine oxidase 1 [Source:HGNC Symbol;Acc:HGNC:20588]
34. NPAT ENSGALG00000017162 1574 0.871 - - - - - - - 0.871 - - nuclear protein, coactivator of histone transcription [Source:HGNC Symbol;Acc:HGNC:7896]
35. HSD17B7 ENSGALG00000037852 4750 0.87 - - - - - - - 0.870 - - hydroxysteroid 17-beta dehydrogenase 7 [Source:NCBI gene;Acc:424367]
36. BACE2 ENSGALG00000034932 1570 0.87 - - - - - - - 0.870 - - beta-secretase 2 [Source:HGNC Symbol;Acc:HGNC:934]
37. NUDT6 ENSGALG00000011834 1309 0.869 - - - - - - - 0.869 - - nudix hydrolase 6 [Source:HGNC Symbol;Acc:HGNC:8053]
38. FBXL8 ENSGALG00000003201 847 0.869 - - - - - - - 0.869 - - F-box and leucine rich repeat protein 8 [Source:NCBI gene;Acc:415701]
39. NCAPH ENSGALG00000032270 2103 0.866 - - - - - - - 0.866 - - non-SMC condensin I complex subunit H [Source:NCBI gene;Acc:425304]
40. ISCU ENSGALG00000004869 6852 0.866 - - - - - - - 0.866 - - iron-sulfur cluster assembly enzyme [Source:HGNC Symbol;Acc:HGNC:29882]
41. HYAL1 ENSGALG00000000785 1778 0.866 - - - - - - - 0.866 - - hyaluronoglucosaminidase 1, transcript variant X3
42. RNH1 ENSGALG00000006904 14542 0.866 - - - - - - - 0.866 - - ribonuclease/angiogenin inhibitor 1 [Source:NCBI gene;Acc:423111]
43. HAGHL ENSGALG00000021040 1568 0.866 - - - - - - - 0.866 - - hydroxyacylglutathione hydrolase-like [Source:NCBI gene;Acc:416536]
44. SNX12 ENSGALG00000005659 9503 0.865 - - - - - - - 0.865 - - sorting nexin 12 [Source:NCBI gene;Acc:428704]
45. TMEM161A ENSGALG00000025809 2813 0.864 - - - - - - - 0.864 - - transmembrane protein 161A [Source:HGNC Symbol;Acc:HGNC:26020]
46. NT5C3B ENSGALG00000003651 5190 0.864 - - - - - - - 0.864 - - 5'-nucleotidase, cytosolic IIIB [Source:NCBI gene;Acc:420034]
47. UPF1 ENSGALG00000003220 9496 0.864 - - - - - - - 0.864 - - UPF1, RNA helicase and ATPase [Source:HGNC Symbol;Acc:HGNC:9962]
48. RNASEH1 ENSGALG00000016389 2694 0.864 - - - - - - - 0.864 - - ribonuclease H1 [Source:NCBI gene;Acc:395848]
49. SPATA2 ENSGALG00000008026 2040 0.864 - - - - - - - 0.864 - - spermatogenesis associated 2 [Source:NCBI gene;Acc:419355]
50. EML1 1941 0.863 - - - - - - - 0.863 - - echinoderm microtubule associated protein like 1, transcript variant X11
51. ERMARD ENSGALG00000011186 1001 0.863 - - - - - - - 0.863 - - ER membrane associated RNA degradation [Source:HGNC Symbol;Acc:HGNC:21056]
52. G2E3 ENSGALG00000009907 1754 0.862 - - - - - - - 0.862 - - G2/M-phase specific E3 ubiquitin protein ligase [Source:NCBI gene;Acc:423305]
53. TICAM1 ENSGALG00000026850 723 0.862 - - - - - - - 0.862 - - toll like receptor adaptor molecule 1 [Source:NCBI gene;Acc:100008585]
54. ENSGALG00000021439 ENSGALG00000021439 628 0.861 - - - - - - - 0.861 - -
55. CRTAP ENSGALG00000034163 6453 0.861 - - - - - - - 0.861 - - cartilage associated protein [Source:NCBI gene;Acc:395992]
56. CCDC80 ENSGALG00000015193 1387 0.861 - - - - - - - 0.861 - - coiled-coil domain containing 80 [Source:NCBI gene;Acc:395074]
57. FBXL17 ENSGALG00000000276 2443 0.86 - - - - - - - 0.860 - - F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
58. GKAP1 ENSGALG00000012586 2908 0.86 - - - - - - - 0.860 - - G kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:17496]
59. ACSS2 ENSGALG00000003362 3023 0.858 - - - - - - - 0.858 - - acyl-CoA synthetase short chain family member 2 [Source:HGNC Symbol;Acc:HGNC:15814]
60. CLCN5 ENSGALG00000007234 1143 0.857 - - - - - - - 0.857 - - chloride voltage-gated channel 5 [Source:HGNC Symbol;Acc:HGNC:2023]
61. MMP15 ENSGALG00000038758 49988 0.857 - - - - - - - 0.857 - - matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]
62. GLT8D1 ENSGALG00000001642 4232 0.857 - - - - - - - 0.857 - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
63. SLC25A28 ENSGALG00000007479 4902 0.856 - - - - - - - 0.856 - - solute carrier family 25 member 28 [Source:HGNC Symbol;Acc:HGNC:23472]
64. ZBTB18 ENSGALG00000010705 3433 0.856 - - - - - - - 0.856 - - zinc finger and BTB domain containing 18 [Source:HGNC Symbol;Acc:HGNC:13030]
65. TANK ENSGALG00000011131 3382 0.856 - - - - - - - 0.856 - - TRAF family member associated NFKB activator [Source:NCBI gene;Acc:424190]
66. CPT2 ENSGALG00000010681 3211 0.856 - - - - - - - 0.856 - - carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
67. BUD13 ENSGALG00000025882 1800 0.855 - - - - - - - 0.855 - - BUD13 homolog [Source:NCBI gene;Acc:428248]
68. ENSGALG00000018634 ENSGALG00000018634 414 0.855 - - - - - - - 0.855 - -
69. SP3 ENSGALG00000031796 8997 0.855 - - - - - - 0.855 - - - Sp3 transcription factor [Source:NCBI gene;Acc:395302]
70. ITFG1 ENSGALG00000004049 2934 0.854 - - - - - - - 0.854 - - integrin alpha FG-GAP repeat containing 1 [Source:NCBI gene;Acc:415742]
71. KIAA1009 KIAA1009 1261 0.853 - - - - - - - 0.853 - -
72. GP1BB ENSGALG00000021529 348 0.853 - - - - - - - 0.853 - - glycoprotein Ib platelet subunit beta [Source:HGNC Symbol;Acc:HGNC:4440]
73. CREBL2 ENSGALG00000037030 1247 0.853 - - - - - - - 0.853 - - cAMP responsive element binding protein like 2 [Source:NCBI gene;Acc:426496]
74. CYB5R2 ENSGALG00000032372 7967 0.853 - - - - - - - 0.853 - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
75. IBTK ENSGALG00000015864 3154 0.853 - - - - - - - 0.853 - - inhibitor of Bruton tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:17853]
76. TAF5 ENSGALG00000008241 5227 0.853 - - - - - - - 0.853 - - TATA-box binding protein associated factor 5 [Source:NCBI gene;Acc:423872]
77. VPS13D ENSGALG00000034777 2350 0.852 - - - - - - - 0.852 - - vacuolar protein sorting 13 homolog D [Source:HGNC Symbol;Acc:HGNC:23595]
78. CCNL2 ENSGALG00000001551 2620 0.851 - - - - - - - 0.851 - - cyclin L2 [Source:NCBI gene;Acc:395124]
79. USP28 ENSGALG00000006969 2645 0.85 - - - - - - - 0.850 - - ubiquitin specific peptidase 28 [Source:NCBI gene;Acc:428246]
80. ASTN2 ENSGALG00000007038 1748 0.85 - - - - - - - 0.850 - - astrotactin 2 [Source:HGNC Symbol;Acc:HGNC:17021]
81. DHODH ENSGALG00000000802 3226 0.85 - - - - - - - 0.850 - - dihydroorotate dehydrogenase (quinone) [Source:NCBI gene;Acc:415876]
82. EFCAB10 ENSGALG00000045949 514 0.85 - - - - - - - 0.850 - - EF-hand calcium binding domain 10 [Source:HGNC Symbol;Acc:HGNC:34531]
83. C9orf64 ENSGALG00000012589 6097 0.849 - - - - - - - 0.849 - - chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
84. CLMP ENSGALG00000006507 8079 0.849 - - - - - - - 0.849 - - CXADR like membrane protein [Source:HGNC Symbol;Acc:HGNC:24039]
85. CAMSAP1 ENSGALG00000001692 2617 0.849 - - - - - - - 0.849 - - calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
86. NRG1 ENSGALG00000015422 196 0.849 - - - - - - - 0.849 - - neuregulin 1 [Source:NCBI gene;Acc:373906]
87. RIMKLB ENSGALG00000040184 281 0.848 - - - - - - - 0.848 - - ribosomal modification protein rimK like family member B [Source:HGNC Symbol;Acc:HGNC:29228]
88. MAOB ENSGALG00000032836 1054 0.848 - - - - - - - 0.848 - - monoamine oxidase B
89. ZNF750 ENSGALG00000001518 151 0.847 - - - - - - - 0.847 - - zinc finger protein 750 [Source:HGNC Symbol;Acc:HGNC:25843]
90. FBXO7 ENSGALG00000012569 4124 0.847 - - - - - - - 0.847 - - F-box protein 7 [Source:NCBI gene;Acc:418063]
91. ABHD12B ENSGALG00000020342 511 0.846 - - - - - - - 0.846 - - abhydrolase domain containing 12B, transcript variant X2
92. ENTPD4 ENSGALG00000000390 1394 0.846 - - - - - - - 0.846 - - ectonucleoside triphosphate diphosphohydrolase 4 [Source:HGNC Symbol;Acc:HGNC:14573]
93. APBB2 ENSGALG00000014262 569 0.846 - - - - - - - 0.846 - - amyloid beta precursor protein binding family B member 2 [Source:HGNC Symbol;Acc:HGNC:582]
94. LBP ENSGALG00000006756 1684 0.845 - - - - - - - 0.845 - - lipopolysaccharide binding protein, transcript variant X1
95. PHF2 ENSGALG00000039208 2003 0.845 - - - - - - - 0.845 - - PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
96. PTPRK ENSGALG00000037423 3688 0.845 - - - - - - - 0.845 - - protein tyrosine phosphatase, receptor type K [Source:HGNC Symbol;Acc:HGNC:9674]
97. PDDC1 5179 0.844 - - - - - - - 0.844 - - Parkinson disease 7 domain containing 1, transcript variant X6
98. ATP1B3 ENSGALG00000002764 1890 0.844 - - - - - - - 0.844 - - ATPase Na+/K+ transporting subunit beta 3 [Source:NCBI gene;Acc:396549]
99. MTUS1 ENSGALG00000013615 1040 0.844 - - - - - - - 0.844 - - microtubule associated tumor suppressor 1, transcript variant X4
100. PPP2R3A ENSGALG00000034512 1091 0.843 - - - - - - - 0.843 - - protein phosphatase 2 regulatory subunit B''alpha [Source:HGNC Symbol;Acc:HGNC:9307]

There are 326 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA