Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PTPN13

Gene Name Gene ID Reads Annotation
PTPN13 ENSGALG00000011078 62 protein tyrosine phosphatase, non-receptor type 13, transcript variant X7











Genes with expression patterns similar to PTPN13

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTPN13 ENSGALG00000011078 62 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 protein tyrosine phosphatase, non-receptor type 13, transcript variant X7
2. STX19 ENSGALG00000015413 28 1.894 - - 0.894 - - - 1.000 - - - syntaxin 19 [Source:HGNC Symbol;Acc:HGNC:19300]
3. CYP2U1 ENSGALG00000027908 13 1.82 - - - - - - 1.000 0.820 - - cytochrome P450 family 2 subfamily U member 1 [Source:HGNC Symbol;Acc:HGNC:20582]
4. TRPC2L ENSGALG00000017493 28 1.644 - - - - - 0.729 0.915 - - - Putative short transient receptor potential channel 2-like protein
5. DLEC1 ENSGALG00000005826 23 1.609 - - 0.873 - - 0.736 - - - - DLEC1, cilia and flagella associated protein [Source:HGNC Symbol;Acc:HGNC:2899]
6. TMEM27 ENSGALG00000029168 36 1.553 - - 0.774 - - - - 0.779 - - transmembrane protein 27, transcript variant X3
7. SLC35D3 ENSGALG00000030545 55 1.546 - - - - - - 0.762 0.784 - - solute carrier family 35 member D3 [Source:HGNC Symbol;Acc:HGNC:15621]
8. SP2 ENSGALG00000000233 43 1.546 - - 0.827 - - - - - - 0.719 Sp2 transcription factor [Source:HGNC Symbol;Acc:HGNC:11207]
9. SULT1E1 ENSGALG00000011812 70 1.513 - - 0.742 - - - - - - 0.771 sulfotransferase family 1E member 1
10. CCP110 ENSGALG00000006925 59 1.447 - - - - - 0.720 - - - 0.727 centriolar coiled-coil protein 110 [Source:HGNC Symbol;Acc:HGNC:24342]
11. ENSGALG00000010222 ENSGALG00000010222 4 1 - - - - - - 1.000 - - -
12. ENSGALG00000028328 ENSGALG00000028328 23 1 - - - - - - 1.000 - - -
13. GSS ENSGALG00000003281 57 1 - - - - - - 1.000 - - - glutathione synthetase [Source:HGNC Symbol;Acc:HGNC:4624]
14. ETV3 ENSGALG00000000669 7 1 - - - - - - 1.000 - - - ETS variant 3 [Source:HGNC Symbol;Acc:HGNC:3492]
15. ENSGALG00000005114 ENSGALG00000005114 79 1 - - - - - - 1.000 - - -
16. DYNC2LI1 ENSGALG00000009954 38 1 - - - - - - 1.000 - - - dynein cytoplasmic 2 light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:24595]
17. PWP2 60 1 - - - - - - 1.000 - - - PWP2, small subunit processome component
18. PGM2L1 ENSGALG00000017304 14 1 - - - - - - 1.000 - - - phosphoglucomutase 2 like 1 [Source:HGNC Symbol;Acc:HGNC:20898]
19. SNORD93 SNORD93 20 1 - - - - - - 1.000 - - -
20. CRB2 ENSGALG00000001169 23 1 - - - - - - 1.000 - - - crumbs 2, cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:18688]
21. TSC1 34 1 - - - - - - 1.000 - - - tuberous sclerosis 1, transcript variant X1
22. B3GNTL1 ENSGALG00000001433 22 1 - - - - - - 1.000 - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
23. LOC100859850 ENSGALG00000000803 3 1 - - - - - - 1.000 - - - lisH domain-containing protein C1711.05-like
24. PAPPA2 40 1 - - - - - - 1.000 - - - pappalysin 2
25. PLEKHG5 ENSGALG00000027476 42 1 - - - - - - 1.000 - - - pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
26. TNS4 ENSGALG00000028308 2 1 - - - - - - 1.000 - - - tensin 4 [Source:HGNC Symbol;Acc:HGNC:24352]
27. COL15A1 ENSGALG00000034119 9 1 - - - - - - 1.000 - - - collagen type XV alpha 1 chain, transcript variant X6
28. ENSGALG00000016136 ENSGALG00000016136 33 1 - - - - - - 1.000 - - -
29. DNAJB13 ENSGALG00000017317 12 0.998 - - - - - - - 0.998 - - DnaJ heat shock protein family (Hsp40) member B13 [Source:HGNC Symbol;Acc:HGNC:30718]
30. PDE8A ENSGALG00000005992 10 0.973 - - - - - 0.973 - - - - phosphodiesterase 8A [Source:HGNC Symbol;Acc:HGNC:8793]
31. SYNE3 ENSGALG00000011076 22 0.962 - - - - - 0.962 - - - - spectrin repeat containing nuclear envelope family member 3 [Source:HGNC Symbol;Acc:HGNC:19861]
32. PCDHA11 58 0.962 - - - - - 0.962 - - - - protocadherin alpha 11
33. FUT13 FUT13 49 0.962 - - - - - - - 0.962 - -
34. KIAA0226L KIAA0226L 95 0.949 - - - - 0.949 - - - - -
35. MTMR9LP ENSGALG00000003313 64 0.949 - - - - - 0.949 - - - - myotubularin related protein 9-like, pseudogene, transcript variant X3
36. HBE1 ENSGALG00000028273 189 0.949 - - - - 0.949 - - - - - hemoglobin subunit epsilon 1 [Source:NCBI gene;Acc:428114]
37. SEPN1 SEPN1 58 0.947 - - - - - 0.947 - - - -
38. NPTXR ENSGALG00000041604 256 0.925 - - - - - - 0.925 - - - neuronal pentraxin receptor [Source:HGNC Symbol;Acc:HGNC:7954]
39. ENSGALG00000026134 ENSGALG00000026134 14 0.915 - - - - - - 0.915 - - -
40. BLB1 ENSGALG00000000141 13 0.905 - - - - - 0.905 - - - - Major histocompatibility complex class II beta chain BLB1 [Source:NCBI gene;Acc:693256]
41. TSPAN1 106 0.897 - - - - - - 0.897 - - - tetraspanin 1
42. FAM26E 37 0.897 - - 0.897 - - - - - - - family with sequence similarity 26 member E
43. SLC51A ENSGALG00000007478 6 0.895 - - - - 0.895 - - - - - solute carrier family 51 alpha subunit [Source:NCBI gene;Acc:424916]
44. VTG1 ENSGALG00000039354 17 0.895 - - - - 0.895 - - - - - vitellogenin 1 [Source:NCBI gene;Acc:424547]
45. KLRD1 ENSGALG00000014722 27 0.895 - - - - 0.895 - - - - - killer cell lectin like receptor D1 [Source:NCBI gene;Acc:769174]
46. MCF2L2 ENSGALG00000008744 8 0.895 - - - - 0.895 - - - - - MCF.2 cell line derived transforming sequence-like 2 [Source:HGNC Symbol;Acc:HGNC:30319]
47. ANKEF1 ENSGALG00000008996 12 0.895 - - - - 0.895 - - - - - ankyrin repeat and EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15803]
48. CRTAC1 ENSGALG00000017378 15 0.895 - - - - 0.895 - - - - - cartilage acidic protein 1 [Source:NCBI gene;Acc:425346]
49. COL19A1 ENSGALG00000043584 38 0.895 - - - - 0.895 - - - - - collagen type XIX alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2196]
50. LRRC19 ENSGALG00000045028 2 0.895 - - - - 0.895 - - - - - leucine rich repeat containing 19 [Source:HGNC Symbol;Acc:HGNC:23379]
51. CHRNA3 ENSGALG00000003014 6 0.895 - - - - 0.895 - - - - - cholinergic receptor nicotinic alpha 3 subunit [Source:NCBI gene;Acc:386578]
52. IGHMBP2 ENSGALG00000004328 118 0.895 - - - - 0.895 - - - - - immunoglobulin mu DNA binding protein 2 [Source:NCBI gene;Acc:422999]
53. CLDN16 ENSGALG00000025821 14 0.895 - - - - 0.895 - - - - - claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
54. PDE1A ENSGALG00000008885 4 0.895 - - - - 0.895 - - - - - phosphodiesterase 1A [Source:HGNC Symbol;Acc:HGNC:8774]
55. FARP2 ENSGALG00000005788 6 0.895 - - - - 0.895 - - - - - FERM, ARH/RhoGEF and pleckstrin domain protein 2 [Source:HGNC Symbol;Acc:HGNC:16460]
56. MC4R ENSGALG00000012907 1 0.895 - - - - 0.895 - - - - - melanocortin 4 receptor [Source:NCBI gene;Acc:428485]
57. TRPM3 ENSGALG00000015126 2 0.895 - - - - 0.895 - - - - - transient receptor potential cation channel subfamily M member 3 [Source:HGNC Symbol;Acc:HGNC:17992]
58. MAP7D1 ENSGALG00000021634 457 0.893 - - - - - - 0.893 - - - MAP7 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25514]
59. C3AR1 ENSGALG00000013218 32 0.893 - - - - - - 0.893 - - - complement C3a receptor 1 [Source:NCBI gene;Acc:418198]
60. CLDN4 2 0.89 - - - - - 0.890 - - - - claudin 4
61. SLC26A2 ENSGALG00000001239 3 0.89 - - - - - 0.890 - - - - solute carrier family 26 member 2 [Source:HGNC Symbol;Acc:HGNC:10994]
62. CLCNKB ENSGALG00000003713 27 0.89 - - - - - 0.890 - - - - chloride voltage-gated channel Kb, transcript variant X3
63. TREM-B1 ENSGALG00000003361 8 0.89 - - - - - 0.890 - - - - triggering receptor expressed on myeloid cells B1 [Source:NCBI gene;Acc:768535]
64. EPAS1 ENSGALG00000010005 14 0.89 - - - - - 0.890 - - - - endothelial PAS domain protein 1 [Source:NCBI gene;Acc:395596]
65. VSTM2L ENSGALG00000006792 11 0.89 - - - - - 0.890 - - - - V-set and transmembrane domain containing 2 like [Source:HGNC Symbol;Acc:HGNC:16096]
66. SGPP2 ENSGALG00000005245 20 0.89 - - - - - 0.890 - - - - sphingosine-1-phosphate phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:19953]
67. CD200L ENSGALG00000015395 14 0.89 - - - - - 0.890 - - - - CD200 molecule-like [Source:NCBI gene;Acc:418424]
68. FRY ENSGALG00000017075 8 0.89 - - - - - 0.890 - - - - FRY microtubule binding protein [Source:HGNC Symbol;Acc:HGNC:20367]
69. LOXL4 ENSGALG00000013090 9 0.89 - - - - - 0.890 - - - - lysyl oxidase like 4 [Source:HGNC Symbol;Acc:HGNC:17171]
70. OTC ENSGALG00000016254 6 0.89 - - - - - 0.890 - - - - ornithine carbamoyltransferase [Source:NCBI gene;Acc:395735]
71. PKP3 ENSGALG00000004260 3 0.89 - - - - - 0.890 - - - - plakophilin 3 [Source:HGNC Symbol;Acc:HGNC:9025]
72. ENSGALG00000022792 ENSGALG00000022792 2 0.89 - - - - - 0.890 - - - -
73. SULT1C SULT1C 118 0.89 - - - - - 0.890 - - - -
74. ENSGALG00000004119 ENSGALG00000004119 1 0.89 - - - - - 0.890 - - - -
75. ESPN ENSGALG00000000645 2 0.89 - - - - - 0.890 - - - - espin [Source:HGNC Symbol;Acc:HGNC:13281]
76. OLAH ENSGALG00000043833 3 0.89 - - - - - 0.890 - - - - oleoyl-ACP hydrolase [Source:HGNC Symbol;Acc:HGNC:25625]
77. RRP8 109 0.89 - - - - - 0.890 - - - - ribosomal RNA processing 8, methyltransferase, homolog (yeast), transcript variant X2
78. ZNF366 ENSGALG00000015008 189 0.89 - - - - - 0.890 - - - - zinc finger protein 366 [Source:HGNC Symbol;Acc:HGNC:18316]
79. IGFBP1 ENSGALG00000043493 68 0.89 - - - - - 0.890 - - - - insulin like growth factor binding protein 1 [Source:NCBI gene;Acc:408027]
80. C1R ENSGALG00000014659 9 0.89 - - - - - 0.890 - - - - complement C1r [Source:HGNC Symbol;Acc:HGNC:1246]
81. TBC1D13 ENSGALG00000004645 1 0.89 - - - - - 0.890 - - - - TBC1 domain family member 13 [Source:HGNC Symbol;Acc:HGNC:25571]
82. RBP7 ENSGALG00000002637 11 0.89 - - - - - 0.890 - - - - retinol binding protein 7 [Source:HGNC Symbol;Acc:HGNC:30316]
83. SRSF2 ENSGALG00000017357 180 0.89 - - - - - 0.890 - - - - serine and arginine rich splicing factor 2 [Source:NCBI gene;Acc:396195]
84. GPR142 ENSGALG00000022536 807 0.89 - - - - - - - 0.890 - - G protein-coupled receptor 142 [Source:HGNC Symbol;Acc:HGNC:20088]
85. UGP2 ENSGALG00000008855 20 0.89 - - - - - 0.890 - - - - UDP-glucose pyrophosphorylase 2 [Source:NCBI gene;Acc:373900]
86. SGSM1 ENSGALG00000005379 10 0.89 - - - - - 0.890 - - - - small G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:29410]
87. FAM53B ENSGALG00000009718 1 0.89 - - - - - 0.890 - - - - family with sequence similarity 53 member B [Source:HGNC Symbol;Acc:HGNC:28968]
88. ZDHHC18 ENSGALG00000034910 16 0.89 - - - - - 0.890 - - - - zinc finger, DHHC-type containing 18 [Source:NCBI gene;Acc:419575]
89. C4A ENSGALG00000017040 5 0.89 - - - - - 0.890 - - - - complement C4A (Rodgers blood group), transcript variant X2
90. LOC771066 ENSGALG00000026964 1 0.89 - - - - - 0.890 - - - - claw keratin-like, transcript variant X1
91. TDRD6 48 0.89 - - - - - 0.890 - - - - tudor domain containing 6
92. SPTSSBL ENSGALG00000026131 70 0.89 - - - - - 0.890 - - - - serine palmitoyltransferase small subunit B-like, transcript variant X6
93. ICMT ENSGALG00000024053 10 0.884 - - 0.884 - - - - - - - isoprenylcysteine carboxyl methyltransferase [Source:NCBI gene;Acc:419373]
94. BTLA ENSGALG00000015398 34 0.882 - - - - - 0.882 - - - - B and T lymphocyte associated, transcript variant X1
95. ENSGALG00000025727 ENSGALG00000025727 26 0.881 - - - - - 0.881 - - - -
96. FUK ENSGALG00000002648 9 0.878 - - 0.878 - - - - - - - fucokinase [Source:HGNC Symbol;Acc:HGNC:29500]
97. UIMC1 ENSGALG00000001158 22 0.877 - - 0.877 - - - - - - - ubiquitin interaction motif containing 1 [Source:HGNC Symbol;Acc:HGNC:30298]
98. CACNA1D ENSGALG00000005332 34 0.875 - - 0.875 - - - - - - - calcium voltage-gated channel subunit alpha1 D [Source:NCBI gene;Acc:395895]
99. PLA1A ENSGALG00000014997 152 0.875 - - 0.875 - - - - - - - phospholipase A1 member A [Source:HGNC Symbol;Acc:HGNC:17661]
100. TRAF3IP3 ENSGALG00000001373 11 0.875 - - 0.875 - - - - - - - TRAF3 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:30766]

There are 251 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA