Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PTPN12

Gene Name Gene ID Reads Annotation
PTPN12 9302 protein tyrosine phosphatase, non-receptor type 12











Genes with expression patterns similar to PTPN12

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTPN12 9302 9 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 protein tyrosine phosphatase, non-receptor type 12
2. MRPL23 ENSGALG00000006561 13737 1.735 - - - - 0.955 - 0.780 - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
3. ATG5 ENSGALG00000015387 7752 1.734 - - 0.771 - 0.963 - - - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
4. BAG4 ENSGALG00000003254 5751 1.733 - - - - 0.966 - 0.767 - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
5. EAPP ENSGALG00000010007 5080 1.729 - - 0.765 - 0.964 - - - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
6. ZBTB10 ENSGALG00000034376 3271 1.71 - - 0.749 - 0.961 - - - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
7. COMMD8 ENSGALG00000026279 13509 1.709 - - 0.745 - 0.964 - - - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
8. SHROOM2 ENSGALG00000030802 4517 1.694 - - 0.748 - 0.946 - - - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
9. REST 2394 1.691 - - 0.729 - 0.962 - - - - - RE1 silencing transcription factor
10. POLR3F ENSGALG00000008749 5645 1.677 - - - - 0.958 - 0.719 - - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
11. CALSYNTENIN-1 CALSYNTENIN-1 11195 1.626 - - 0.834 - - - 0.792 - - -
12. QSER1 ENSGALG00000012030 4490 1.6 - - 0.830 - - - 0.770 - - - glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
13. PTDSS2 ENSGALG00000004300 682 1.575 - - 0.819 - - - 0.756 - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
14. MND1 ENSGALG00000009212 11765 1.572 - - 0.711 - - - 0.861 - - - meiotic nuclear divisions 1 [Source:NCBI gene;Acc:422399]
15. TAF1B ENSGALG00000016437 2318 1.568 - - 0.787 - - - 0.781 - - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
16. IFT81 ENSGALG00000003854 2534 1.567 - - 0.806 - - - 0.761 - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
17. PANK1 ENSGALG00000006431 2910 1.563 - - 0.795 - - - 0.768 - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
18. HYAL1 ENSGALG00000000785 1778 1.56 - - 0.796 - - - 0.764 - - - hyaluronoglucosaminidase 1, transcript variant X3
19. WHSC1 1712 1.555 - - 0.799 - - - 0.756 - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
20. FAM53A ENSGALG00000015713 3795 1.549 - - - - 0.761 - 0.788 - - - family with sequence similarity 53 member A [Source:NCBI gene;Acc:378905]
21. FOXK2 ENSGALG00000001577 6346 1.548 - - 0.766 - - - 0.782 - - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
22. ABHD13 ENSGALG00000016853 4975 1.548 - - 0.759 - - - 0.789 - - - abhydrolase domain containing 13 [Source:NCBI gene;Acc:418763]
23. RHOGL ENSGALG00000005464, ENSGALG00000005475 5791 1.522 - - 0.750 - - - 0.772 - - - rho-related GTP-binding protein RhoG-like [Source:NCBI gene;Acc:422207]
24. BEND5 ENSGALG00000010505 3298 1.509 - - 0.723 - - - 0.786 - - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
25. EFNB1 ENSGALG00000036539 2706 1.494 - - 0.718 - - - 0.776 - - - ephrin B1 [Source:NCBI gene;Acc:395896]
26. CASP8AP2 ENSGALG00000015611 5657 1.491 - - 0.740 - - - 0.751 - - - caspase 8 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1510]
27. ZCCHC8 ENSGALG00000004486 3201 1.477 - - 0.718 - - - 0.759 - - - zinc finger CCHC-type containing 8 [Source:NCBI gene;Acc:416862]
28. PQLC1 ENSGALG00000043150 3133 1.477 - - 0.747 - - - 0.730 - - - PQ loop repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:26188]
29. COG7 ENSGALG00000006156 4072 1.472 - - 0.726 - - - 0.746 - - - component of oligomeric golgi complex 7 [Source:NCBI gene;Acc:416578]
30. DAK DAK 13208 1.456 - - 0.751 - - - 0.705 - - -
31. RBM25 ENSGALG00000009332 10842 1.448 - - 0.742 - - - 0.706 - - - RNA binding motif protein 25 [Source:NCBI gene;Acc:423250]
32. NAA30 ENSGALG00000012098 4681 1.421 - - 0.717 - - - - 0.704 - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
33. PPA1 ENSGALG00000004442 33355 1.416 - - - - 0.707 - 0.709 - - - pyrophosphatase (inorganic) 1 [Source:HGNC Symbol;Acc:HGNC:9226]
34. RCAN3 ENSGALG00000004282 7778 0.97 - - - - 0.970 - - - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
35. FH ENSGALG00000013165 13669 0.968 - - - - 0.968 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
36. IGBP1 ENSGALG00000044628 9200 0.966 - - - - 0.966 - - - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
37. DDX55 ENSGALG00000003298 2315 0.965 - - - - 0.965 - - - - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
38. DNAJC12 ENSGALG00000002769 1418 0.964 - - - - 0.964 - - - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
39. TLCD1 ENSGALG00000003973 17569 0.964 - - - - 0.964 - - - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
40. MKI67 ENSGALG00000025996 28136 0.964 - - - - 0.964 - - - - - marker of proliferation Ki-67, transcript variant X3
41. CBWD1 ENSGALG00000010147 2765 0.963 - - - - 0.963 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
42. CZH9ORF41 CZH9ORF41 3492 0.963 - - - - 0.963 - - - - -
43. RABEP1 ENSGALG00000001737 2650 0.962 - - - - 0.962 - - - - - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
44. COIL ENSGALG00000003158 7806 0.962 - - - - 0.962 - - - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
45. CDC42SE2 ENSGALG00000027258 4725 0.961 - - - - 0.961 - - - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
46. ENSGALG00000011687 ENSGALG00000011687 4553 0.961 - - - - 0.961 - - - - -
47. YY1 ENSGALG00000017388 1933 0.961 - - - - 0.961 - - - - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
48. XPO7 ENSGALG00000001838 1875 0.961 - - - - 0.961 - - - - - exportin 7 [Source:NCBI gene;Acc:426925]
49. IGF1R ENSGALG00000040651 772 0.961 - - - - 0.961 - - - - - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
50. ELL2 ENSGALG00000014678 1111 0.96 - - - - 0.960 - - - - - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
51. CTSZ ENSGALG00000007462 630 0.96 - - - - 0.960 - - - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
52. SIRT1 ENSGALG00000002761 9028 0.96 - - - - 0.960 - - - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
53. SSPN ENSGALG00000014042 638 0.96 - - - - 0.960 - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
54. TMEM165 ENSGALG00000027886 5468 0.96 - - - - 0.960 - - - - - transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
55. STK3 ENSGALG00000032850 6339 0.959 - - - - 0.959 - - - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
56. MRPS27 ENSGALG00000015002 6541 0.959 - - - - 0.959 - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
57. FERMT2 ENSGALG00000012425 5480 0.959 - - - - 0.959 - - - - - fermitin family member 2 [Source:HGNC Symbol;Acc:HGNC:15767]
58. LATS2 4776 0.959 - - - - 0.959 - - - - - large tumor suppressor kinase 2
59. STRAP ENSGALG00000013092 13100 0.959 - - - - 0.959 - - - - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
60. KNOP1 ENSGALG00000002042 6251 0.958 - - - - 0.958 - - - - - lysine-rich nucleolar protein 1, transcript variant X1
61. TRAPPC12 ENSGALG00000016387 2593 0.958 - - - - 0.958 - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
62. LTA4H ENSGALG00000033709 15826 0.958 - - - - - - 0.958 - - - leukotriene A4 hydrolase [Source:NCBI gene;Acc:417918]
63. CSNK1G1 ENSGALG00000030812 31618 0.958 - - - - 0.958 - - - - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
64. POLR2B ENSGALG00000011387 4864 0.957 - - - - 0.957 - - - - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
65. AATF ENSGALG00000005420 6501 0.956 - - - - 0.956 - - - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
66. NAP1L1 ENSGALG00000010238 14506 0.956 - - - - 0.956 - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
67. SH2D3C ENSGALG00000005036 5101 0.956 - - - - 0.956 - - - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
68. SSR2 ENSGALG00000000764 32190 0.956 - - - - 0.956 - - - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
69. WDR82 ENSGALG00000025904 4783 0.955 - - - - 0.955 - - - - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
70. TCP11L1 ENSGALG00000011688 2427 0.955 - - - - 0.955 - - - - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
71. PSPC1 ENSGALG00000017142 13036 0.954 - - - - 0.954 - - - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
72. LARP1 ENSGALG00000040109 14808 0.953 - - - - 0.953 - - - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
73. PCBP4 ENSGALG00000027695 7937 0.951 - - - - 0.951 - - - - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
74. REEP5 ENSGALG00000023157 6282 0.95 - - - - 0.950 - - - - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
75. NOP58 ENSGALG00000008454 34630 0.949 - - - - 0.949 - - - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
76. TLK2 ENSGALG00000000410 4690 0.949 - - - - 0.949 - - - - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
77. MRPS25 ENSGALG00000008506 12131 0.948 - - - - 0.948 - - - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
78. NFASC ENSGALG00000031776 4264 0.948 - - - - 0.948 - - - - - neurofascin [Source:NCBI gene;Acc:419824]
79. PUM1 ENSGALG00000042598 9392 0.948 - - - - 0.948 - - - - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
80. PTTG1 17936 0.948 - - - - 0.948 - - - - - pituitary tumor-transforming 1, transcript variant X1
81. SKP2 ENSGALG00000003547 14637 0.947 - - - - 0.947 - - - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
82. GFPT1 ENSGALG00000036391 14025 0.947 - - - - 0.947 - - - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
83. PLAA ENSGALG00000001782 5459 0.946 - - - - 0.946 - - - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
84. RPL24 ENSGALG00000015339 227460 0.946 - - - - 0.946 - - - - - ribosomal protein L24 [Source:NCBI gene;Acc:418401]
85. GPN3 ENSGALG00000003807 6320 0.946 - - - - 0.946 - - - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
86. FBXO9 ENSGALG00000016320 9600 0.946 - - - - 0.946 - - - - - F-box protein 9 [Source:NCBI gene;Acc:421895]
87. SAR1B ENSGALG00000038753 6493 0.945 - - - - 0.945 - - - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
88. IGDCC4 ENSGALG00000007410 5457 0.945 - - - - 0.945 - - - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
89. ENSGALG00000014852 ENSGALG00000014852 15288 0.945 - - - - 0.945 - - - - -
90. SFSWAP ENSGALG00000002487 9977 0.944 - - - - 0.944 - - - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
91. EXO1 ENSGALG00000010748 7572 0.944 - - - - 0.944 - - - - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
92. TBCA ENSGALG00000004353 18510 0.943 - - - - 0.943 - - - - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
93. KPNA3 ENSGALG00000017009 17330 0.942 - - - - 0.942 - - - - - karyopherin subunit alpha 3 [Source:NCBI gene;Acc:418870]
94. RANGAP1 ENSGALG00000011966 20170 0.941 - - - - 0.941 - - - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
95. TK2 ENSGALG00000034216 5394 0.94 - - - - 0.940 - - - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
96. NAA25 ENSGALG00000041821 12729 0.94 - - - - 0.940 - - - - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:NCBI gene;Acc:416883]
97. CCT4 ENSGALG00000008812 78267 0.939 - - - - 0.939 - - - - - chaperonin containing TCP1 subunit 4 [Source:NCBI gene;Acc:395414]
98. RAB12 ENSGALG00000033608 14160 0.938 - - - - 0.938 - - - - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
99. OGT ENSGALG00000005425 31074 0.937 - - - - 0.937 - - - - - O-linked N-acetylglucosamine (GlcNAc) transferase [Source:HGNC Symbol;Acc:HGNC:8127]
100. OLA1 ENSGALG00000009325 26414 0.935 - - - - 0.935 - - - - - Obg like ATPase 1 [Source:NCBI gene;Acc:424144]

There are 626 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA