Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PTPMT1

Gene Name Gene ID Reads Annotation
PTPMT1 ENSGALG00000008091 6160 protein tyrosine phosphatase, mitochondrial 1 [Source:NCBI gene;Acc:423181]











Genes with expression patterns similar to PTPMT1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTPMT1 ENSGALG00000008091 6160 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein tyrosine phosphatase, mitochondrial 1 [Source:NCBI gene;Acc:423181]
2. NDUFA12 ENSGALG00000011325 19807 1.631 - - - - - - 0.842 0.789 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
3. C11H16ORF80 C11H16ORF80 18673 1.62 - - - - - - 0.836 0.784 - -
4. NENF ENSGALG00000009821 4826 1.587 - - - - - - 0.865 0.722 - - neudesin neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:30384]
5. GABPB1 ENSGALG00000023440 5676 1.583 - - - - - - 0.797 0.786 - - GA binding protein transcription factor beta subunit 1 [Source:NCBI gene;Acc:415453]
6. CTSL2 CTSL2 7966 1.573 - - - - - - 0.814 0.759 - -
7. MRPL47 ENSGALG00000013759 9044 1.567 - - - - - - 0.752 0.815 - - mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:HGNC:16652]
8. TRAPPC6B ENSGALG00000010157 7567 1.566 - - - - - - 0.776 0.790 - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
9. FANCL ENSGALG00000030022 7423 1.556 - - - - - - 0.765 0.791 - - FA complementation group L [Source:NCBI gene;Acc:421202]
10. CHRAC1 ENSGALG00000040823 5695 1.556 - - - - - - 0.753 0.803 - - chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
11. BLMH ENSGALG00000004259 36907 1.554 - - - - - - 0.721 0.833 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
12. NAA20 ENSGALG00000012587 11349 1.547 - - - - - - 0.750 0.797 - - N(alpha)-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:HGNC:15908]
13. DSCR3 3583 1.547 - - - - - - 0.757 0.790 - - DSCR3 arrestin fold containing, transcript variant X1
14. ADRM1 ENSGALG00000005200 5417 1.544 - - - - - - 0.737 0.807 - - adhesion regulating molecule 1 [Source:NCBI gene;Acc:395365]
15. MSMO1 ENSGALG00000009560 6928 1.537 - - - - - - 0.776 0.761 - - methylsterol monooxygenase 1 [Source:NCBI gene;Acc:422423]
16. RRP7A ENSGALG00000011866 7718 1.536 - - - - - - 0.723 0.813 - - ribosomal RNA processing 7 homolog A [Source:NCBI gene;Acc:417975]
17. INCENP ENSGALG00000007537 16617 1.533 - - - - - - 0.741 0.792 - - inner centromere protein [Source:NCBI gene;Acc:396270]
18. HARS ENSGALG00000035080 11602 1.526 - - - - - - 0.819 0.707 - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
19. DNAJA4 ENSGALG00000036850 6847 1.522 - - - - - - 0.773 0.749 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
20. RIOK2 ENSGALG00000015288 6280 1.513 - - - - - - 0.788 0.725 - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
21. C4orf27 C4orf27 16724 1.512 - - - - - - 0.748 0.764 - -
22. NUP85 ENSGALG00000007974 21249 1.51 - - - - - - 0.793 0.717 - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
23. MRPL2 ENSGALG00000008597 16500 1.509 - - - - - - 0.721 0.788 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
24. CCNDBP1 ENSGALG00000004837 11520 1.501 - - - - - - 0.781 0.720 - - cyclin D1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1587]
25. MADH2 MADH2 13017 1.501 - - 0.713 - - - 0.788 - - -
26. RRP1B ENSGALG00000035696 12309 1.499 - - - - - - 0.725 0.774 - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
27. SPCS1 ENSGALG00000001655 7718 1.496 - - - - - - 0.711 0.785 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
28. HOXA5 ENSGALG00000025929 6231 1.496 - - - - - - 0.710 0.786 - - homeobox A5 [Source:NCBI gene;Acc:100858404]
29. ADSL ENSGALG00000012034 10280 1.482 - - - - - - 0.751 0.731 - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
30. CPSF3L CPSF3L 3584 1.48 - - - - - - 0.724 0.756 - -
31. SDF2L1 ENSGALG00000031982 6084 1.479 - - - - - - 0.751 0.728 - - stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
32. RANBP9 ENSGALG00000012696 4871 1.479 - - - - - - 0.776 0.703 - - RAN binding protein 9 [Source:HGNC Symbol;Acc:HGNC:13727]
33. CNI CNI 18453 1.477 - - - - - - 0.708 0.769 - -
34. ADI1 ENSGALG00000025796 8636 1.476 - - - - - - 0.728 0.748 - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
35. SPDL1 ENSGALG00000001942 4403 1.475 - - - - - - 0.749 0.726 - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
36. XPO4 ENSGALG00000017132 2538 1.472 - - - - - - 0.733 0.739 - - exportin 4 [Source:NCBI gene;Acc:428081]
37. FAM63B 3793 1.469 - - - - - - 0.712 0.757 - - family with sequence similarity 63 member B
38. STX6 3297 1.468 - - - - - - 0.733 0.735 - - syntaxin 6
39. CWC27 ENSGALG00000014747 8389 1.467 - - - - - - 0.731 0.736 - - CWC27 spliceosome associated protein homolog [Source:HGNC Symbol;Acc:HGNC:10664]
40. POMP ENSGALG00000017090 5504 1.466 - - - - - - 0.715 0.751 - - proteasome maturation protein [Source:HGNC Symbol;Acc:HGNC:20330]
41. SF3B3 ENSGALG00000002531 19397 1.46 - - - - - - 0.709 0.751 - - splicing factor 3b subunit 3, transcript variant X2
42. QTRTD1 QTRTD1 10765 1.459 - - - - - - 0.752 0.707 - -
43. SGOL1 SGOL1 3919 1.457 - - - - - - 0.721 0.736 - -
44. IARS ENSGALG00000004813 12936 1.457 - - - - - - 0.735 0.722 - - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]
45. EXOSC9 ENSGALG00000011884 3403 1.456 - - - - - - 0.721 0.735 - - exosome component 9 [Source:NCBI gene;Acc:619530]
46. ENSGALG00000020510 ENSGALG00000020510 4037 1.455 - - - - - - 0.735 0.720 - -
47. TAF2 ENSGALG00000043193 6311 1.437 - - - - - - 0.709 0.728 - - TATA-box binding protein associated factor 2 [Source:NCBI gene;Acc:428389]
48. MRPL46 ENSGALG00000006782 5033 1.435 - - - - - - 0.718 0.717 - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
49. HCCS ENSGALG00000005571 4939 1.435 - - - - - - 0.716 0.719 - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
50. CDK2AP1 ENSGALG00000034919 5469 1.434 - - - - - - 0.719 0.715 - - cyclin dependent kinase 2 associated protein 1 [Source:NCBI gene;Acc:416826]
51. ENSGALG00000001398 ENSGALG00000001398 3248 1.429 - - - - - - 0.706 0.723 - -
52. TIMMDC1 ENSGALG00000024480 9337 1.414 - - - - - - 0.704 0.710 - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
53. HSCB ENSGALG00000005706 12953 0.889 - - - - - - - 0.889 - - HscB mitochondrial iron-sulfur cluster cochaperone [Source:HGNC Symbol;Acc:HGNC:28913]
54. DAD1 ENSGALG00000035626 32604 0.878 - - - - - - - 0.878 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
55. ECI1 ENSGALG00000031563 11326 0.875 - - - - - - 0.875 - - - enoyl-CoA delta isomerase 1 [Source:NCBI gene;Acc:416657]
56. TDP2 ENSGALG00000013637 6595 0.87 - - - - - - - 0.870 - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
57. RFC1 ENSGALG00000014298 6516 0.868 - - - - - - - 0.868 - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
58. MSH6 ENSGALG00000008957 6396 0.862 - - - - - - - 0.862 - - mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
59. PSMB3 ENSGALG00000001597 22588 0.859 - - - - - - - 0.859 - - proteasome subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]
60. MRPL30 ENSGALG00000016760 16965 0.858 - - - - - - 0.858 - - - mitochondrial ribosomal protein L30
61. TXNDC9 ENSGALG00000032090 6804 0.856 - - - - - - 0.856 - - - thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:24110]
62. BPNT1 ENSGALG00000009576 7445 0.855 - - - - - - - 0.855 - - 3'(2'), 5'-bisphosphate nucleotidase 1 [Source:NCBI gene;Acc:421347]
63. SYS1 ENSGALG00000003929 4487 0.855 - - - - - - - 0.855 - - SYS1, golgi trafficking protein [Source:NCBI gene;Acc:419183]
64. STRN3 ENSGALG00000040464 9045 0.852 - - - - - - - 0.852 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
65. RBM17 ENSGALG00000006332 12656 0.851 - - - - - - 0.851 - - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
66. ACP1 ENSGALG00000016363 10636 0.848 - - - - - - - 0.848 - - acid phosphatase 1 [Source:NCBI gene;Acc:421909]
67. YWHAZ ENSGALG00000031387 84985 0.847 - - - - - - 0.847 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
68. EMC3 ENSGALG00000003738 10363 0.845 - - - - - - - 0.845 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
69. ATR ENSGALG00000002663 4626 0.844 - - - - - - - 0.844 - - ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
70. SRBD1 ENSGALG00000009990 4568 0.844 - - - - - - - 0.844 - - S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521]
71. UBE2V1 ENSGALG00000008015 17947 0.844 - - - - - - 0.844 - - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
72. SUV39H2 ENSGALG00000013920 4360 0.844 - - - - - - - 0.844 - - suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
73. GOLGA7 ENSGALG00000003483 26525 0.843 - - - - - - 0.843 - - - golgin A7 [Source:NCBI gene;Acc:426787]
74. UCHL3 ENSGALG00000016921 16208 0.843 - - - - - - 0.843 - - - ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
75. FAM18B1 ENSGALG00000001335 5177 0.843 - - - - - - - 0.843 - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
76. RBBP4 ENSGALG00000003522 72455 0.842 - - - - - - 0.842 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
77. YRDC ENSGALG00000029001 6529 0.842 - - - - - - - 0.842 - - yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905]
78. TRAF3IP1 ENSGALG00000004236 7094 0.841 - - - - - - - 0.841 - - TRAF3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:17861]
79. NUDT7 ENSGALG00000034395 7396 0.841 - - - - - - - 0.841 - - nudix hydrolase 7 [Source:NCBI gene;Acc:415800]
80. METAP2 ENSGALG00000011377 16311 0.84 - - - - - - 0.840 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
81. GCSH ENSGALG00000032679 29231 0.84 - - - - - - - 0.840 - - glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
82. CTDP1 ENSGALG00000031461 4818 0.839 - - - - - - 0.839 - - - CTD phosphatase subunit 1 [Source:HGNC Symbol;Acc:HGNC:2498]
83. SREK1 ENSGALG00000014775 13961 0.837 - - - - - - - 0.837 - - splicing regulatory glutamic acid and lysine rich protein 1, transcript variant X3
84. UQCRH ENSGALG00000017380 55734 0.837 - - - - - - 0.837 - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
85. CTNNBL1 ENSGALG00000006817 6765 0.836 - - - - - - - 0.836 - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
86. CTBP1 ENSGALG00000039942 9383 0.834 - - - - - - 0.834 - - - C-terminal binding protein 1 [Source:NCBI gene;Acc:422904]
87. ENSGALG00000001861 ENSGALG00000001861 10150 0.834 - - - - - - - 0.834 - -
88. MRPL55 5995 0.833 - - - - - - - 0.833 - - mitochondrial ribosomal protein L55
89. DJ-1 DJ-1 13462 0.833 - - - - - - - 0.833 - -
90. CHMP3 ENSGALG00000015805 11581 0.833 - - - - - - 0.833 - - - charged multivesicular body protein 3
91. TMX3 ENSGALG00000013757 6387 0.831 - - - - - - 0.831 - - - Gallus gallus thioredoxin related transmembrane protein 3 (TMX3), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001321606]
92. ZNF593 ENSGALG00000000542 79105 0.831 - - - - - - 0.831 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
93. C1H11ORF73 C1H11ORF73 10071 0.829 - - - - - - - 0.829 - -
94. MRPL54 ENSGALG00000027611 39450 0.829 - - - - - - 0.829 - - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
95. API5 ENSGALG00000037968 18265 0.829 - - - - - - 0.829 - - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
96. GLO1 ENSGALG00000010127 31662 0.828 - - - - - - 0.828 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
97. TMEM167A ENSGALG00000027332 13862 0.827 - - - - - - 0.827 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
98. RPS28 ENSGALG00000024398 244056 0.827 - - - - - - 0.827 - - - ribosomal protein S28 [Source:NCBI gene;Acc:768930]
99. ENSGALG00000005870 ENSGALG00000005870 4343 0.827 - - - - - - - 0.827 - -
100. UBQLN4 ENSGALG00000042214 15829 0.827 - - - - - - 0.827 - - - ubiquilin 4 [Source:NCBI gene;Acc:426353]

There are 739 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA