Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PTPDC1

Gene Name Gene ID Reads Annotation
PTPDC1 ENSGALG00000005128 529 protein tyrosine phosphatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30184]











Genes with expression patterns similar to PTPDC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTPDC1 ENSGALG00000005128 529 9 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein tyrosine phosphatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30184]
2. GGH ENSGALG00000031130 40 1.468 - - 0.725 - - 0.743 - - - - gamma-glutamyl hydrolase [Source:HGNC Symbol;Acc:HGNC:4248]
3. BAALC ENSGALG00000045617 850 1.449 - - - - - - 0.749 0.700 - - BAALC, MAP3K1 and KLF4 binding [Source:HGNC Symbol;Acc:HGNC:14333]
4. EPHA1 ENSGALG00000014687 174 0.9 - - - - - - 0.900 - - - EPH receptor A1 [Source:NCBI gene;Acc:378782]
5. NDST2 ENSGALG00000005107 4224 0.85 - - - - - - 0.850 - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
6. LOC428824 ENSGALG00000004393 358 0.85 - - - - - - - - 0.850 - SITS-binding protein-like, transcript variant X1
7. USP37 ENSGALG00000011427 280 0.845 - - - - - - 0.845 - - - ubiquitin specific peptidase 37 [Source:NCBI gene;Acc:424216]
8. SNAP47 ENSGALG00000005412 1487 0.835 - - - - - - 0.835 - - - synaptosome associated protein 47 [Source:HGNC Symbol;Acc:HGNC:30669]
9. CRY2 ENSGALG00000008436 1732 0.828 - - - - - - - - 0.828 - cryptochrome circadian regulator 2 [Source:NCBI gene;Acc:374092]
10. ENSGALG00000026941 ENSGALG00000026941 653 0.827 - - - - - - 0.827 - - -
11. DBI ENSGALG00000012112 6910 0.821 - - - - - - 0.821 - - - diazepam binding inhibitor, acyl-CoA binding protein [Source:NCBI gene;Acc:395263]
12. ANAPC7 ENSGALG00000003826 5484 0.813 - - - - - - 0.813 - - - anaphase promoting complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:17380]
13. TOP3A ENSGALG00000005028 535 0.812 - - - - - - 0.812 - - - DNA topoisomerase III alpha [Source:NCBI gene;Acc:416517]
14. ENSGALG00000004703 ENSGALG00000004703 112 0.808 - - - - - - 0.808 - - -
15. ENSGALG00000024035 ENSGALG00000024035 544 0.801 - - - - - - 0.801 - - -
16. LMINA ENSGALG00000006083 760 0.795 - - 0.795 - - - - - - - lamin-L(III)-like, transcript variant X2
17. RAB36 ENSGALG00000006710 434 0.791 - - - - - - 0.791 - - - RAB36, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9775]
18. RPP30 ENSGALG00000006486 1767 0.788 - - - - - - - - 0.788 - ribonuclease P/MRP subunit p30 [Source:HGNC Symbol;Acc:HGNC:17688]
19. ACOX1 ENSGALG00000002159 2953 0.787 - - - - - - 0.787 - - - acyl-CoA oxidase 1 [Source:NCBI gene;Acc:417366]
20. N4BP2L2 857 0.786 - - - - - - 0.786 - - - NEDD4 binding protein 2 like 2, transcript variant X7
21. CDCA2 ENSGALG00000045842 2236 0.778 - - - - - - - - 0.778 - cell division cycle associated 2, transcript variant X3
22. KLF4 ENSGALG00000026928 184 0.775 - - - - - - - - 0.775 - Kruppel like factor 4 [Source:HGNC Symbol;Acc:HGNC:6348]
23. PHC1 ENSGALG00000014263 1022 0.772 - - - - - - - - 0.772 - polyhomeotic homolog 1 [Source:NCBI gene;Acc:418252]
24. EDARADD ENSGALG00000031763 541 0.77 - - - - - - 0.770 - - - EDAR associated death domain [Source:NCBI gene;Acc:497625]
25. GATAD1 ENSGALG00000009399 4067 0.769 - - - - - - 0.769 - - - GATA zinc finger domain containing 1 [Source:NCBI gene;Acc:420551]
26. SLC2A1 ENSGALG00000004889 10 0.769 - - 0.769 - - - - - - - solute carrier family 2 member 1 [Source:NCBI gene;Acc:396130]
27. C10ORF57 C10ORF57 249 0.769 - - 0.769 - - - - - - -
28. POGLUT1 ENSGALG00000015480 12290 0.768 - - - - - - - - 0.768 - protein O-glucosyltransferase 1 [Source:NCBI gene;Acc:418455]
29. SORCS1 ENSGALG00000008465 468 0.767 - - - - - - - 0.767 - - sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]
30. DINB1 DINB1 113 0.765 - - - - - - - - 0.765 -
31. ENSGALG00000027162 ENSGALG00000027162 8 0.765 - - 0.765 - - - - - - -
32. PITPNM3 ENSGALG00000006034 335 0.765 - - - - - - - - 0.765 - PITPNM family member 3 [Source:HGNC Symbol;Acc:HGNC:21043]
33. SLC30A9 ENSGALG00000031415 36 0.763 - - 0.763 - - - - - - - solute carrier family 30 member 9
34. EX-FABP EX-FABP 516 0.763 - - 0.763 - - - - - - -
35. PLEKHF1 ENSGALG00000004474 8 0.762 - - 0.762 - - - - - - - pleckstrin homology and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20764]
36. KHDRBS1 ENSGALG00000003272 4249 0.762 - - - - - - 0.762 - - - KH RNA binding domain containing, signal transduction associated 1 [Source:NCBI gene;Acc:374071]
37. MYO10 ENSGALG00000036466 710 0.761 - - 0.761 - - - - - - - myosin X [Source:HGNC Symbol;Acc:HGNC:7593]
38. ELP3 ENSGALG00000016624 4483 0.76 - - 0.760 - - - - - - - elongator acetyltransferase complex subunit 3 [Source:NCBI gene;Acc:422021]
39. WNT7B ENSGALG00000036255 3343 0.759 - - 0.759 - - - - - - - Wnt family member 7B [Source:NCBI gene;Acc:427937]
40. C2CD5 ENSGALG00000013210 3060 0.759 - - - - - - - - 0.759 - C2 calcium dependent domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29062]
41. TMCO4 ENSGALG00000004081 31 0.758 - - 0.758 - - - - - - - transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
42. MYRF ENSGALG00000041253 13 0.758 - - 0.758 - - - - - - - myelin regulatory factor [Source:HGNC Symbol;Acc:HGNC:1181]
43. C22orf39 ENSGALG00000044654 1364 0.757 - - 0.757 - - - - - - - chromosome 22 open reading frame 39 [Source:HGNC Symbol;Acc:HGNC:27012]
44. BET1 ENSGALG00000024485 2451 0.756 - - 0.756 - - - - - - - Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
45. AIM1 51 0.755 - - 0.755 - - - - - - - absent in melanoma 1, transcript variant X2
46. IFT88 1241 0.755 - - - - - - 0.755 - - - intraflagellar transport 88, transcript variant X3
47. NSUN2 ENSGALG00000013064 2005 0.754 - - - - - - - - 0.754 - NOP2/Sun RNA methyltransferase family member 2 [Source:NCBI gene;Acc:420938]
48. SPOCK3 ENSGALG00000009568 33 0.754 - - 0.754 - - - - - - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]
49. PAMR1 ENSGALG00000007886 928 0.754 - - - - - - 0.754 - - - peptidase domain containing associated with muscle regeneration 1 [Source:HGNC Symbol;Acc:HGNC:24554]
50. KCNQ1 ENSGALG00000037138 179 0.754 - - 0.754 - - - - - - - potassium voltage-gated channel subfamily Q member 1 [Source:HGNC Symbol;Acc:HGNC:6294]
51. JMJD4 ENSGALG00000005417 10 0.752 - - 0.752 - - - - - - - jumonji domain containing 4 [Source:NCBI gene;Acc:420400]
52. IQSEC1 ENSGALG00000005042 24 0.752 - - 0.752 - - - - - - - IQ motif and Sec7 domain 1 [Source:HGNC Symbol;Acc:HGNC:29112]
53. TAF5L ENSGALG00000011098 17 0.752 - - 0.752 - - - - - - - TATA-box binding protein associated factor 5 like [Source:HGNC Symbol;Acc:HGNC:17304]
54. ENSGALG00000007855 ENSGALG00000007855 7 0.752 - - 0.752 - - - - - - -
55. TLR5 ENSGALG00000009392 28 0.752 - - 0.752 - - - - - - - toll like receptor 5 [Source:NCBI gene;Acc:554217]
56. OR11A1 ENSGALG00000041229 9 0.752 - - 0.752 - - - - - - - olfactory receptor family 11 subfamily A member 1
57. INPP5J ENSGALG00000023266 6 0.752 - - 0.752 - - - - - - - inositol polyphosphate-5-phosphatase J [Source:HGNC Symbol;Acc:HGNC:8956]
58. EFHC1 ENSGALG00000016674 14 0.752 - - 0.752 - - - - - - - EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16406]
59. ENSGALG00000003796 ENSGALG00000003796 7 0.752 - - 0.752 - - - - - - -
60. C2orf44 C2orf44 2869 0.752 - - - - - - - - 0.752 -
61. TMIE 6 0.752 - - 0.752 - - - - - - - transmembrane inner ear
62. TRAIL-LIKE ENSGALG00000007240 8 0.752 - - 0.752 - - - - - - - TNF-related apoptosis inducing ligand-like [Source:NCBI gene;Acc:395283]
63. MFSD8 ENSGALG00000010199 11 0.751 - - 0.751 - - - - - - - major facilitator superfamily domain containing 8 [Source:HGNC Symbol;Acc:HGNC:28486]
64. KCNC1 ENSGALG00000006220 15 0.751 - - 0.751 - - - - - - - potassium voltage-gated channel subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:6233]
65. MADD ENSGALG00000008181 2273 0.75 - - - - - - 0.750 - - - MAP kinase activating death domain [Source:HGNC Symbol;Acc:HGNC:6766]
66. RAP2A ENSGALG00000016889 26 0.75 - - 0.750 - - - - - - - RAP2A, member of RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9861]
67. BMP4 ENSGALG00000012429 4306 0.749 - - - - - - - - 0.749 - bone morphogenetic protein 4 [Source:NCBI gene;Acc:396165]
68. MAF ENSGALG00000026258 45 0.749 - - - - - - - - 0.749 - MAF bZIP transcription factor [Source:NCBI gene;Acc:693248]
69. PPL ENSGALG00000002201 13 0.749 - - 0.749 - - - - - - - periplakin
70. ZNF410 ENSGALG00000010193 28 0.748 - - 0.748 - - - - - - - zinc finger protein 410 [Source:NCBI gene;Acc:423340]
71. MIA3 ENSGALG00000041034 2038 0.747 - - - - - - 0.747 - - - MIA family member 3, ER export factor [Source:NCBI gene;Acc:421337]
72. CNR1 ENSGALG00000037511 38 0.747 - - 0.747 - - - - - - - cannabinoid receptor 1 [Source:NCBI gene;Acc:428633]
73. CHID1 ENSGALG00000006830 964 0.746 - - 0.746 - - - - - - - chitinase domain containing 1 [Source:NCBI gene;Acc:423103]
74. PFKFB4 ENSGALG00000002099, ENSGALG00000032385 30 0.746 - - 0.746 - - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 [Source:HGNC Symbol;Acc:HGNC:8875]
75. LPAR4 ENSGALG00000004121 2543 0.746 - - - - - - 0.746 - - - lysophosphatidic acid receptor 4 [Source:NCBI gene;Acc:422149]
76. TMEM173 ENSGALG00000041129 93 0.746 - - 0.746 - - - - - - - transmembrane protein 173 [Source:NCBI gene;Acc:768990]
77. DCUN1D4 ENSGALG00000014078 2393 0.745 - - - - - - - - 0.745 - defective in cullin neddylation 1 domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28998]
78. MMP13 ENSGALG00000017183 7 0.744 - - 0.744 - - - - - - - matrix metallopeptidase 13 [Source:NCBI gene;Acc:395683]
79. ENSGALG00000002005 ENSGALG00000002005 987 0.742 - - - - - - 0.742 - - -
80. IGSF6 ENSGALG00000007059 25 0.742 - - 0.742 - - - - - - - immunoglobulin superfamily member 6 [Source:NCBI gene;Acc:771906]
81. FANCA ENSGALG00000000516 250 0.74 - - 0.740 - - - - - - - Fanconi anemia complementation group A [Source:NCBI gene;Acc:415854]
82. ANAPC1 ENSGALG00000008254 2519 0.739 - - 0.739 - - - - - - - anaphase promoting complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:19988]
83. ZNF385C ENSGALG00000003403 9 0.739 - - 0.739 - - - - - - - zinc finger protein 385C [Source:HGNC Symbol;Acc:HGNC:33722]
84. CHANK3 CHANK3 218 0.738 - - - - - - - - 0.738 -
85. ENSGALG00000020349 ENSGALG00000020349 10 0.738 - - 0.738 - - - - - - -
86. NUPL2 ENSGALG00000010942 2442 0.737 - - - - - - 0.737 - - - nucleoporin like 2 [Source:NCBI gene;Acc:420614]
87. LRRCC1 ENSGALG00000039499 480 0.736 - - - - - - - - 0.736 - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:HGNC Symbol;Acc:HGNC:29373]
88. ARHGDIG ENSGALG00000036819 18 0.736 - - 0.736 - - - - - - - Rho GDP dissociation inhibitor gamma [Source:HGNC Symbol;Acc:HGNC:680]
89. C18orf21 ENSGALG00000013131 2816 0.735 - - - - - - 0.735 - - - chromosome 18 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:28802]
90. ZNF438 ENSGALG00000007266 26 0.735 - - 0.735 - - - - - - - zinc finger protein 438 [Source:HGNC Symbol;Acc:HGNC:21029]
91. OPTN ENSGALG00000013738 1024 0.734 - - - - - - - - 0.734 - optineurin [Source:NCBI gene;Acc:374079]
92. C12H3ORF19 C12H3ORF19 1278 0.734 - - - - - - 0.734 - - -
93. TTC12 1384 0.733 - - - - - - 0.733 - - - tetratricopeptide repeat domain 12, transcript variant X4
94. WDR37 ENSGALG00000006749 44 0.733 - - 0.733 - - - - - - - WD repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:31406]
95. SLC2A9 ENSGALG00000014971 751 0.733 - - - - - - 0.733 - - - solute carrier family 2 member 9 [Source:HGNC Symbol;Acc:HGNC:13446]
96. gga-mir-1787 ENSGALG00000025542 1373 0.732 - - - - - - 0.732 - - - gga-mir-1787 [Source:miRBase;Acc:MI0007530]
97. CCDC126 ENSGALG00000010976 1892 0.732 - - 0.732 - - - - - - - coiled-coil domain containing 126 [Source:HGNC Symbol;Acc:HGNC:22398]
98. CREG2 ENSGALG00000040947 1279 0.731 - - 0.731 - - - - - - - cellular repressor of E1A stimulated genes 2 [Source:HGNC Symbol;Acc:HGNC:14272]
99. LRP6 ENSGALG00000031503 39 0.731 - - 0.731 - - - - - - - LDL receptor related protein 6 [Source:HGNC Symbol;Acc:HGNC:6698]
100. AAGAB ENSGALG00000007887 142 0.73 - - - - - - 0.730 - - - alpha- and gamma-adaptin binding protein [Source:NCBI gene;Acc:415553]

There are 90 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA