Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PTP4A1

Gene Name Gene ID Reads Annotation
PTP4A1 ENSGALG00000016271 23953 protein tyrosine phosphatase type IVA, member 1 [Source:NCBI gene;Acc:421877]











Genes with expression patterns similar to PTP4A1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTP4A1 ENSGALG00000016271 23953 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein tyrosine phosphatase type IVA, member 1 [Source:NCBI gene;Acc:421877]
2. ENSGALG00000002595 ENSGALG00000002595 32163 1.96 - - - - - - 0.994 0.966 - -
3. UQCR11 ENSGALG00000001096 25245 1.791 - - - - - - 0.995 0.796 - - ubiquinol-cytochrome c reductase, complex III subunit XI [Source:NCBI gene;Acc:770135]
4. ISCA1 ENSGALG00000012606 10342 1.731 - - 0.763 - - - - 0.968 - - iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]
5. PDIA5 ENSGALG00000011689 6913 1.7 - - 0.729 - - - - 0.971 - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
6. MFF ENSGALG00000003079 5289 1.697 - - 0.720 - - - - 0.977 - - mitochondrial fission factor [Source:HGNC Symbol;Acc:HGNC:24858]
7. SGCE ENSGALG00000009670 3070 1.696 - - 0.722 - - - - 0.974 - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
8. DHX15 ENSGALG00000014395 24041 0.999 - - - - - - 0.999 - - - DEAH-box helicase 15 [Source:NCBI gene;Acc:422813]
9. PAPOLA ENSGALG00000033099 20532 0.996 - - - - - - 0.996 - - - poly(A) polymerase alpha [Source:NCBI gene;Acc:395878]
10. COX4I1 68632 0.996 - - - - - - 0.996 - - - cytochrome c oxidase subunit 4I1, transcript variant X1
11. UTRN ENSGALG00000012256 9980 0.996 - - - - - - 0.996 - - - utrophin [Source:HGNC Symbol;Acc:HGNC:12635]
12. ALYREF ENSGALG00000007237 48479 0.995 - - - - - - 0.995 - - - Aly/REF export factor [Source:NCBI gene;Acc:769169]
13. GCSH ENSGALG00000032679 29231 0.995 - - - - - - 0.995 - - - glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
14. ETFA ENSGALG00000002925 24053 0.994 - - - - - - 0.994 - - - electron-transfer-flavoprotein, alpha polypeptide [Source:NCBI gene;Acc:415353]
15. PLK1 ENSGALG00000006110 12892 0.994 - - - - - - 0.994 - - - polo like kinase 1 [Source:NCBI gene;Acc:416575]
16. FAM63A 8470 0.994 - - - - - - 0.994 - - - family with sequence similarity 63 member A, transcript variant X2
17. ATOX1 ENSGALG00000004176 16486 0.994 - - - - - - 0.994 - - - antioxidant 1 copper chaperone [Source:NCBI gene;Acc:770231]
18. TXNRD3 ENSGALG00000039363 8016 0.993 - - - - - - 0.993 - - - thioredoxin reductase 3 [Source:NCBI gene;Acc:416031]
19. SFRP1 ENSGALG00000003473 5917 0.993 - - - - - - 0.993 - - - secreted frizzled related protein 1 [Source:NCBI gene;Acc:395237]
20. CCDC85A ENSGALG00000043080 7624 0.993 - - - - - - 0.993 - - - coiled-coil domain containing 85A [Source:HGNC Symbol;Acc:HGNC:29400]
21. DNAJC2 ENSGALG00000008249 28064 0.993 - - - - - - 0.993 - - - DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
22. CCNG1 ENSGALG00000001718 9873 0.993 - - - - - - 0.993 - - - cyclin G1 [Source:HGNC Symbol;Acc:HGNC:1592]
23. COQ9 ENSGALG00000001184 10174 0.993 - - - - - - 0.993 - - - coenzyme Q9 [Source:NCBI gene;Acc:415636]
24. ZFP161 ZFP161 3538 0.992 - - - - - - 0.992 - - -
25. FIG4 ENSGALG00000015070 3018 0.991 - - - - - - 0.991 - - - FIG4 phosphoinositide 5-phosphatase [Source:NCBI gene;Acc:421762]
26. SUMO1 ENSGALG00000008435 19847 0.991 - - - - - - 0.991 - - - small ubiquitin-like modifier 1 [Source:NCBI gene;Acc:373930]
27. TOMM70A TOMM70A 24085 0.991 - - - - - - 0.991 - - -
28. ENSGALG00000007210 ENSGALG00000007210 2203 0.991 - - - - - - 0.991 - - -
29. GSTA GSTA 3130 0.991 - - - - - - 0.991 - - -
30. LGALS3 ENSGALG00000012173 3306 0.991 - - - - - - 0.991 - - - galectin 3 [Source:NCBI gene;Acc:373917]
31. C5H11ORF58 C5H11ORF58 36659 0.99 - - - - - - 0.990 - - -
32. PAK1IP1 ENSGALG00000012724 10907 0.988 - - - - - - 0.988 - - - PAK1 interacting protein 1 [Source:NCBI gene;Acc:420850]
33. ENSGALG00000016007 ENSGALG00000016007 62448 0.987 - - - - - - 0.987 - - -
34. MRPS31 ENSGALG00000017033 9287 0.981 - - - - - - - 0.981 - - mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:HGNC:16632]
35. TCTEX1D2 ENSGALG00000027722 2201 0.98 - - - - - - - 0.980 - - Tctex1 domain containing 2
36. YWHAB ENSGALG00000004143 40276 0.98 - - - - - - 0.980 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta [Source:NCBI gene;Acc:419190]
37. POLR3H ENSGALG00000011947 2899 0.98 - - - - - - - 0.980 - - RNA polymerase III subunit H [Source:NCBI gene;Acc:417990]
38. MRPS7 ENSGALG00000007999 5445 0.98 - - - - - - - 0.980 - - mitochondrial ribosomal protein S7 [Source:NCBI gene;Acc:422122]
39. C26H6ORF106 C26H6ORF106 2168 0.98 - - - - - - - 0.980 - -
40. PRKAR2A ENSGALG00000007023 909 0.98 - - - - - - - 0.980 - - protein kinase cAMP-dependent type II regulatory subunit alpha [Source:HGNC Symbol;Acc:HGNC:9391]
41. WDR91 ENSGALG00000011724 5787 0.98 - - - - - - - 0.980 - - WD repeat domain 91 [Source:NCBI gene;Acc:417939]
42. CCDC167 ENSGALG00000010151 3567 0.98 - - - - - - - 0.980 - - coiled-coil domain containing 167 [Source:NCBI gene;Acc:421433]
43. KPNA1 ENSGALG00000014426 2724 0.98 - - - - - - - 0.980 - - karyopherin subunit alpha 1 [Source:NCBI gene;Acc:418271]
44. CLIP1 ENSGALG00000004467 1058 0.98 - - - - - - - 0.980 - - CAP-Gly domain containing linker protein 1 [Source:NCBI gene;Acc:395784]
45. TNPO3 ENSGALG00000039420 5178 0.979 - - - - - - - 0.979 - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
46. NOL6 ENSGALG00000030730 7191 0.979 - - - - - - 0.979 - - - nucleolar protein 6
47. ANGIOPOIETIN-2 ANGIOPOIETIN-2 920 0.979 - - - - - - - 0.979 - -
48. GOT2 ENSGALG00000002321 4961 0.979 - - - - - - - 0.979 - - glutamic-oxaloacetic transaminase 2 [Source:NCBI gene;Acc:396533]
49. EPM2A ENSGALG00000012275 872 0.979 - - - - - - - 0.979 - - EPM2A, laforin glucan phosphatase [Source:NCBI gene;Acc:421611]
50. TNFRSF11B ENSGALG00000043167 911 0.979 - - - - - - - 0.979 - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
51. EEFSEC ENSGALG00000038684 298 0.979 - - - - - - - 0.979 - - eukaryotic elongation factor, selenocysteine-tRNA specific [Source:HGNC Symbol;Acc:HGNC:24614]
52. ARFGAP3 ENSGALG00000014140 4612 0.979 - - - - - - - 0.979 - - ADP ribosylation factor GTPase activating protein 3 [Source:NCBI gene;Acc:418224]
53. KCNK5 ENSGALG00000034077 3233 0.979 - - - - - - - 0.979 - - potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
54. GNG10 ENSGALG00000015683 6905 0.979 - - - - - - - 0.979 - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
55. LYRM4 ENSGALG00000027339 2917 0.979 - - - - - - - 0.979 - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
56. COL14A1 ENSGALG00000037675 2652 0.979 - - - - - - - 0.979 - - collagen type XIV alpha 1 chain [Source:NCBI gene;Acc:396276]
57. PM20D1 ENSGALG00000000724 2108 0.979 - - - - - - - 0.979 - - peptidase M20 domain containing 1 [Source:NCBI gene;Acc:419838]
58. B9D1 ENSGALG00000005096 760 0.979 - - - - - - - 0.979 - - B9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24123]
59. NOVA1 ENSGALG00000009850 7584 0.978 - - - - - - - 0.978 - - uncharacterized LOC423300 [Source:NCBI gene;Acc:423300]
60. TLE3 ENSGALG00000008120 2655 0.978 - - - - - - - 0.978 - - transducin like enhancer of split 3, transcript variant X10
61. CEP192 ENSGALG00000035625 2270 0.978 - - - - - - - 0.978 - - centrosomal protein 192 [Source:HGNC Symbol;Acc:HGNC:25515]
62. C5ORF13 C5ORF13 50177 0.978 - - - - - - 0.978 - - -
63. ELMO2 ENSGALG00000007246 4569 0.977 - - - - - - - 0.977 - - engulfment and cell motility 2 [Source:HGNC Symbol;Acc:HGNC:17233]
64. OTUD4 ENSGALG00000009968 3919 0.977 - - - - - - - 0.977 - - OTU deubiquitinase 4 [Source:HGNC Symbol;Acc:HGNC:24949]
65. CAPZA1 ENSGALG00000001547 24242 0.977 - - - - - - - 0.977 - - capping actin protein of muscle Z-line alpha subunit 1 [Source:NCBI gene;Acc:396521]
66. RAB24 ENSGALG00000002984 6264 0.976 - - - - - - - 0.976 - - RAB24, member RAS oncogene family [Source:NCBI gene;Acc:427627]
67. BMP5 ENSGALG00000016293 2119 0.976 - - - - - - - 0.976 - - bone morphogenetic protein 5 [Source:NCBI gene;Acc:396053]
68. LGMN ENSGALG00000010811 7401 0.975 - - - - - - - 0.975 - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
69. SHROOM2 ENSGALG00000030802 4517 0.974 - - - - - - - 0.974 - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
70. HHIP ENSGALG00000009948 1536 0.972 - - - - - - - 0.972 - - hedgehog interacting protein [Source:HGNC Symbol;Acc:HGNC:14866]
71. SLC25A14 ENSGALG00000004063 5574 0.972 - - - - - - - 0.972 - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
72. SERPINH1 ENSGALG00000011214 15311 0.971 - - - - - - - 0.971 - - serpin family H member 1 [Source:NCBI gene;Acc:396228]
73. L3HYPDH ENSGALG00000012011 2212 0.971 - - - - - - - 0.971 - - trans-L-3-hydroxyproline dehydratase [Source:HGNC Symbol;Acc:HGNC:20488]
74. TRIM9 ENSGALG00000012367 1267 0.971 - - - - - - - 0.971 - - tripartite motif containing 9 [Source:HGNC Symbol;Acc:HGNC:16288]
75. ATPAF1 ENSGALG00000010444 3677 0.967 - - - - - - - 0.967 - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
76. BRMS1L ENSGALG00000010093 4964 0.967 - - - - - - - 0.967 - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
77. TRMT10A ENSGALG00000012264 2467 0.967 - - - - - - - 0.967 - - tRNA methyltransferase 10A [Source:HGNC Symbol;Acc:HGNC:28403]
78. UPF3B ENSGALG00000008618 12350 0.966 - - - - - - - 0.966 - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
79. MRPL38 ENSGALG00000002194 6648 0.965 - - - - - - - 0.965 - - mitochondrial ribosomal protein L38 [Source:NCBI gene;Acc:770172]
80. CYB5B ENSGALG00000000660 9733 0.964 - - - - - - - 0.964 - - cytochrome b5 type B [Source:NCBI gene;Acc:415865]
81. FAM136A ENSGALG00000042163 39487 0.962 - - - - - - - 0.962 - - family with sequence similarity 136 member A [Source:NCBI gene;Acc:426296]
82. N6AMT2 N6AMT2 4703 0.962 - - - - - - - 0.962 - -
83. ARID4A ENSGALG00000012037 8554 0.962 - - - - - - - 0.962 - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
84. RPB6 RPB6 9517 0.961 - - - - - - - 0.961 - -
85. PAX1 ENSGALG00000039040 3339 0.958 - - - - - - - 0.958 - - paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
86. COPS3 ENSGALG00000004834 16012 0.955 - - - - - - - 0.955 - - COP9 signalosome subunit 3 [Source:NCBI gene;Acc:416504]
87. NMD3 ENSGALG00000009533 8726 0.954 - - - - - - - 0.954 - - NMD3 ribosome export adaptor [Source:HGNC Symbol;Acc:HGNC:24250]
88. CAT ENSGALG00000030187 7534 0.948 - - - - - - - 0.948 - - catalase [Source:NCBI gene;Acc:423600]
89. DGKZ ENSGALG00000008380 5389 0.947 - - - - - - - 0.947 - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
90. gga-mir-3526 ENSGALG00000029121 41375 0.947 - - - - - - 0.947 - - - gga-mir-3526 [Source:miRBase;Acc:MI0015377]
91. SUCLG1 ENSGALG00000015961 14323 0.942 - - - - - - 0.942 - - - succinate-CoA ligase alpha subunit [Source:NCBI gene;Acc:422932]
92. CNOT6 ENSGALG00000034316 10496 0.941 - - - - - - - 0.941 - - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
93. PHLDA2 ENSGALG00000032687 7733 0.939 - - - - - - - 0.939 - - pleckstrin homology like domain family A member 2 [Source:NCBI gene;Acc:423088]
94. ATG12 ENSGALG00000002345 3607 0.938 - - - - - - - 0.938 - - autophagy related 12 [Source:HGNC Symbol;Acc:HGNC:588]
95. NAT10 ENSGALG00000014573 12754 0.937 - - - - - - - 0.937 - - N-acetyltransferase 10 [Source:NCBI gene;Acc:426609]
96. ACO2 ENSGALG00000011950 30387 0.935 - - - - - - - 0.935 - - aconitase 2 [Source:NCBI gene;Acc:374009]
97. GSTO1 ENSGALG00000008409 7561 0.933 - - - - - - - 0.933 - - glutathione S-transferase omega 1 [Source:NCBI gene;Acc:423881]
98. RFC4 ENSGALG00000008703 5842 0.93 - - - - - - - 0.930 - - replication factor C subunit 4 [Source:NCBI gene;Acc:424958]
99. MAP2 ENSGALG00000002789 6597 0.929 - - - - - - - 0.929 - - microtubule associated protein 2, transcript variant X33
100. IDI1 ENSGALG00000006723 7761 0.928 - - - - - - - 0.928 - - isopentenyl-diphosphate delta isomerase 1, transcript variant X1

There are 281 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA