Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PTGDS

Gene Name Gene ID Reads Annotation
PTGDS ENSGALG00000030886 363 prostaglandin D2 synthase 21kDa (brain) [Source:NCBI gene;Acc:374110]











Genes with expression patterns similar to PTGDS

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTGDS ENSGALG00000030886 363 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 prostaglandin D2 synthase 21kDa (brain) [Source:NCBI gene;Acc:374110]
2. PCDH17 ENSGALG00000016941 1006 1.434 - - - - - 0.731 - 0.703 - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
3. gga-mir-22 ENSGALG00000024507 2 0.801 - - - - - - - - - 0.801 gga-mir-22 [Source:miRBase;Acc:MI0006982]
4. SNX13 ENSGALG00000010840 13 0.801 - - - - - - - - - 0.801 sorting nexin 13 [Source:NCBI gene;Acc:420598]
5. POLR3G ENSGALG00000014650 7 0.801 - - - - - - - - - 0.801 RNA polymerase III subunit G, transcript variant X2
6. IFN-GAMMA IFN-GAMMA 1 0.801 - - - - - - - - - 0.801
7. ENSGALG00000026496 ENSGALG00000026496 9 0.801 - - - - - - - - - 0.801
8. GRAMD2 GRAMD2 3 0.801 - - - - - - - - - 0.801
9. MST MST 9 0.801 - - - - - - - - - 0.801
10. WNT7A ENSGALG00000005123 2 0.801 - - - - - - - - - 0.801 Wnt family member 7A [Source:NCBI gene;Acc:374168]
11. NUDT3 ENSGALG00000002830 7 0.801 - - - - - - - - - 0.801 nudix hydrolase 3 [Source:NCBI gene;Acc:419905]
12. SNORA77 SNORA77 5 0.801 - - - - - - - - - 0.801
13. NT5E ENSGALG00000015833 5 0.801 - - - - - - - - - 0.801 5'-nucleotidase ecto
14. RBL2 ENSGALG00000003663 10 0.801 - - - - - - - - - 0.801 RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
15. RAB9B ENSGALG00000004918 2 0.801 - - - - - - - - - 0.801 RAB9B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:14090]
16. LRRN3 ENSGALG00000009488 1 0.801 - - - - - - - - - 0.801 leucine rich repeat neuronal 3 [Source:HGNC Symbol;Acc:HGNC:17200]
17. DAPK1 ENSGALG00000012608 17 0.801 - - - - - - - - - 0.801 death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
18. ENSGALG00000004619 ENSGALG00000004619 3 0.801 - - - - - - - - - 0.801
19. TRIM36 ENSGALG00000008188 1 0.801 - - - - - - - - - 0.801 tripartite motif containing 36 [Source:HGNC Symbol;Acc:HGNC:16280]
20. ESR2 ENSGALG00000011801 7 0.801 - - - - - - - - - 0.801 estrogen receptor 2 [Source:NCBI gene;Acc:395575]
21. ENSGALG00000009487 ENSGALG00000009487 1 0.801 - - - - - - - - - 0.801
22. C6orf58 ENSGALG00000045522 2 0.801 - - - - - - - - - 0.801 chromosome 6 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:20960]
23. FOSL2 ENSGALG00000010036 3 0.801 - - - - - - - - - 0.801 FOS like 2, AP-1 transcription factor subunit [Source:NCBI gene;Acc:421416]
24. ENSGALG00000024286 ENSGALG00000024286 2 0.801 - - - - - - - - - 0.801
25. CAMTA1 ENSGALG00000039525 1 0.801 - - - - - - - - - 0.801 calmodulin binding transcription activator 1 [Source:HGNC Symbol;Acc:HGNC:18806]
26. EXOC6B ENSGALG00000016098 3 0.801 - - - - - - - - - 0.801 exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
27. TTC29 ENSGALG00000010009 4 0.801 - - - - - - - - - 0.801 tetratricopeptide repeat domain 29 [Source:HGNC Symbol;Acc:HGNC:29936]
28. RUFY4 2 0.801 - - - - - - - - - 0.801 RUN and FYVE domain containing 4, transcript variant X5
29. C8B ENSGALG00000010853 21 0.801 - - - - - - - - - 0.801 Gallus gallus complement C8 beta chain (C8B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321543]
30. RS1 ENSGALG00000016523 11 0.801 - - - - - - - - - 0.801 retinoschisin 1 [Source:NCBI gene;Acc:772315]
31. ACOT1L ENSGALG00000008752 6 0.801 - - - - - - - - - 0.801 acyl-CoA thioesterase 1-like
32. C17H9ORF7 C17H9ORF7 71 0.793 - - - - - - - - - 0.793
33. COL9A2 ENSGALG00000027526 4685 0.786 - - - - - - - 0.786 - - collagen type IX alpha 2 chain [Source:NCBI gene;Acc:396524]
34. CDH6 ENSGALG00000012917 17 0.784 - - - - - - - - - 0.784 cadherin 6 [Source:NCBI gene;Acc:414842]
35. KLF13 ENSGALG00000026590 13 0.775 - - - - - - - - - 0.775 Kruppel like factor 13 [Source:HGNC Symbol;Acc:HGNC:13672]
36. PTPRB ENSGALG00000010049 15 0.772 - - - - - - - - - 0.772 protein tyrosine phosphatase, receptor type B [Source:HGNC Symbol;Acc:HGNC:9665]
37. LECT1 LECT1 12694 0.772 - - - - - - - 0.772 - -
38. SAMD3 ENSGALG00000032409 459 0.771 - - - - - - - 0.771 - - sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21574]
39. SNORA40 SNORA40 12 0.77 - - - - - - - - - 0.770
40. FNDC1 ENSGALG00000011663 1040 0.767 - - - - - - - 0.767 - - fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21184]
41. TIMP3 ENSGALG00000028627 8706 0.762 - - - - - - - 0.762 - - TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]
42. SH2D4B ENSGALG00000002370 10 0.761 - - - - - - - - - 0.761 SH2 domain containing 4B [Source:HGNC Symbol;Acc:HGNC:31440]
43. RASGRF2 ENSGALG00000015598 30 0.76 - - - - - - - 0.760 - - Ras protein specific guanine nucleotide releasing factor 2 [Source:HGNC Symbol;Acc:HGNC:9876]
44. PIGM ENSGALG00000010768 41 0.76 - - - - - - - 0.760 - - phosphatidylinositol glycan anchor biosynthesis class M [Source:NCBI gene;Acc:428583]
45. OCA2 ENSGALG00000016740 421 0.755 - - - - - - - 0.755 - - OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]
46. COL9A3 ENSGALG00000005628 2842 0.753 - - - - - - - 0.753 - - collagen type IX alpha 3 chain [Source:NCBI gene;Acc:396242]
47. P2RY13 ENSGALG00000039432 16 0.75 - - - - - - - - - 0.750 purinergic receptor P2Y13 [Source:HGNC Symbol;Acc:HGNC:4537]
48. SST ENSGALG00000007361 1383 0.749 - - - - - - - 0.749 - - somatostatin [Source:NCBI gene;Acc:396279]
49. SMYD3 ENSGALG00000010653 14 0.749 - - - - - - - - - 0.749 SET and MYND domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15513]
50. EPHA1 ENSGALG00000014687 174 0.749 - - - - - - - - - 0.749 EPH receptor A1 [Source:NCBI gene;Acc:378782]
51. TFEC ENSGALG00000040557 34 0.748 - - - - - - - - - 0.748 transcription factor EC [Source:NCBI gene;Acc:417773]
52. NPY7R ENSGALG00000021303 215 0.747 - - - - - 0.747 - - - - neuropeptide Y7 receptor [Source:NCBI gene;Acc:416280]
53. PEX7 ENSGALG00000013874 34 0.746 - - 0.746 - - - - - - - peroxisomal biogenesis factor 7 [Source:NCBI gene;Acc:421687]
54. RAB38 ENSGALG00000028018 1046 0.743 - - - - - - - 0.743 - - RAB38, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9776]
55. SPON2 ENSGALG00000038433 1240 0.74 - - - - - - - 0.740 - - spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]
56. GPR158 ENSGALG00000007667 111 0.739 - - - - - - - 0.739 - - G protein-coupled receptor 158 [Source:NCBI gene;Acc:100859400]
57. OSF-2 OSF-2 10433 0.72 - - - - - - - 0.720 - -
58. C9H2ORF82 ENSGALG00000040264 4201 0.717 - - - - - - - 0.717 - - chromosome 9 open reading frame, human C2orf82 [Source:NCBI gene;Acc:768774]
59. SLC25A29 ENSGALG00000011220 17 0.716 - - - - - - - - - 0.716 solute carrier family 25 member 29 [Source:HGNC Symbol;Acc:HGNC:20116]
60. BRINP2 ENSGALG00000004448 26 0.713 - - - - - - - - - 0.713 BMP/retinoic acid inducible neural specific 2 [Source:HGNC Symbol;Acc:HGNC:13746]
61. U12 U12 3 0.711 - - - - - - - - - 0.711
62. PARP12 ENSGALG00000046187 10 0.711 - - - - - - - - - 0.711 poly(ADP-ribose) polymerase family member 12 [Source:HGNC Symbol;Acc:HGNC:21919]
63. SHH ENSGALG00000006379 1943 0.711 - - - - - - - 0.711 - - sonic hedgehog [Source:NCBI gene;Acc:395615]
64. UST ENSGALG00000012345 7 0.708 - - - - - - - - - 0.708 uronyl 2-sulfotransferase [Source:HGNC Symbol;Acc:HGNC:17223]
65. TBC1D2B ENSGALG00000003322 54 0.708 - - - - - - - - - 0.708 TBC1 domain family member 2B [Source:HGNC Symbol;Acc:HGNC:29183]
66. POF1B ENSGALG00000006919 7 0.707 - - - - - - - - - 0.707 POF1B, actin binding protein [Source:HGNC Symbol;Acc:HGNC:13711]
67. DRP2 ENSGALG00000005031 1 0.707 - - - - - - - - - 0.707 dystrophin related protein 2 [Source:HGNC Symbol;Acc:HGNC:3032]
68. NCBP2 ENSGALG00000006843 938 0.702 - - - - - - - 0.702 - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA