Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PTDSS1

Gene Name Gene ID Reads Annotation
PTDSS1 ENSGALG00000030185 5515 phosphatidylserine synthase 1 [Source:NCBI gene;Acc:428374]











Genes with expression patterns similar to PTDSS1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTDSS1 ENSGALG00000030185 5515 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 phosphatidylserine synthase 1 [Source:NCBI gene;Acc:428374]
2. RILPL2 ENSGALG00000003321 5632 1.731 - - - - - - 0.802 0.929 - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
3. SGTA ENSGALG00000014067 2248 1.675 - - 0.734 - - - - 0.941 - - small glutamine rich tetratricopeptide repeat containing alpha [Source:NCBI gene;Acc:426396]
4. MSRA ENSGALG00000028032 2607 1.658 - - 0.856 - - - 0.802 - - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
5. RNF4 ENSGALG00000015668 15780 1.639 - - 0.830 - - - - 0.809 - - ring finger protein 4 [Source:NCBI gene;Acc:422886]
6. SOD2 ENSGALG00000011661 13178 1.631 - - 0.812 - - - 0.819 - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
7. SCRN1 ENSGALG00000011176 3783 1.58 - - 0.789 - - - 0.791 - - - secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
8. RBM5 30998 1.578 - - 0.806 - - - - 0.772 - - RNA binding motif protein 5, transcript variant X1
9. SLC25A14 ENSGALG00000004063 5574 1.565 - - 0.801 - - - 0.764 - - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
10. MINOS1 ENSGALG00000004039 37740 1.551 - - - - - - 0.836 0.715 - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
11. METTL11A METTL11A 11876 1.547 - - 0.734 - - - 0.813 - - -
12. KIF15 ENSGALG00000036645 9946 1.534 - - 0.788 - - - 0.746 - - - kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]
13. MRE11A MRE11A 5754 1.529 - - 0.743 - - - 0.786 - - -
14. GFM1 ENSGALG00000009634 7213 1.521 - - 0.749 - - - 0.772 - - - G elongation factor mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:13780]
15. AK6 ENSGALG00000020534 4791 1.517 - - 0.717 - - - 0.800 - - - adenylate kinase 6 [Source:NCBI gene;Acc:425215]
16. BTAF1 ENSGALG00000030598 3556 1.509 - - 0.733 - - - 0.776 - - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
17. UBE2L3 ENSGALG00000036739 21401 1.498 - - 0.737 - - - - 0.761 - - ubiquitin conjugating enzyme E2 L3 [Source:NCBI gene;Acc:416769]
18. COX7A2L ENSGALG00000037996 13646 1.459 - - 0.720 - - - 0.739 - - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
19. CLTA ENSGALG00000015326 26867 1.445 - - 0.737 - - - 0.708 - - - clathrin light chain A [Source:NCBI gene;Acc:427284]
20. VMA21 ENSGALG00000009065 6432 0.955 - - - - - - - 0.955 - - VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]
21. GLMN ENSGALG00000005959 2049 0.945 - - - - - - - 0.945 - - glomulin, FKBP associated protein [Source:HGNC Symbol;Acc:HGNC:14373]
22. TNFRSF1A ENSGALG00000039461 1569 0.945 - - - - - - - 0.945 - - TNF receptor superfamily member 1A [Source:NCBI gene;Acc:418325]
23. PGAP2 ENSGALG00000027762 2583 0.944 - - - - - - - 0.944 - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
24. OGFOD3 ENSGALG00000001618 2438 0.943 - - - - - - - 0.943 - - 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
25. LANCL2 ENSGALG00000032570 815 0.942 - - - - - - - 0.942 - - LanC like 2 [Source:HGNC Symbol;Acc:HGNC:6509]
26. SIK1 ENSGALG00000041988 2179 0.942 - - - - - - - 0.942 - - salt inducible kinase 1 [Source:NCBI gene;Acc:395417]
27. ARID3C ENSGALG00000005839 646 0.941 - - - - - - - 0.941 - - AT-rich interaction domain 3C [Source:HGNC Symbol;Acc:HGNC:21209]
28. NME3 ENSGALG00000027635 5974 0.941 - - - - - - - 0.941 - - NME/NM23 nucleoside diphosphate kinase 3 [Source:NCBI gene;Acc:416399]
29. SPTBN5 395 0.941 - - - - - - - 0.941 - - spectrin beta, non-erythrocytic 5
30. EVC ENSGALG00000015037 1963 0.941 - - - - - - - 0.941 - - EvC ciliary complex subunit 1 [Source:NCBI gene;Acc:422851]
31. IMPA1 ENSGALG00000034487 3691 0.941 - - - - - - - 0.941 - - inositol monophosphatase 1 [Source:HGNC Symbol;Acc:HGNC:6050]
32. PSTK 2511 0.94 - - - - - - - 0.940 - - phosphoseryl-tRNA kinase, transcript variant X1
33. C1H11ORF67 C1H11ORF67 2089 0.94 - - - - - - - 0.940 - -
34. MAP3K7 ENSGALG00000015596 15164 0.94 - - - - - - - 0.940 - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
35. HADHA ENSGALG00000016536 3791 0.94 - - - - - - - 0.940 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha [Source:NCBI gene;Acc:395929]
36. ALG6 ENSGALG00000010991 3258 0.939 - - - - - - - 0.939 - - ALG6, alpha-1,3-glucosyltransferase [Source:NCBI gene;Acc:395078]
37. TSEN2 ENSGALG00000004981 1929 0.939 - - 0.939 - - - - - - - tRNA splicing endonuclease subunit 2 [Source:NCBI gene;Acc:415965]
38. SLC4A1AP ENSGALG00000010047 3171 0.939 - - - - - - - 0.939 - - solute carrier family 4 member 1 adaptor protein [Source:HGNC Symbol;Acc:HGNC:13813]
39. SSU72 ENSGALG00000001489 7589 0.939 - - - - - - - 0.939 - - SSU72 homolog, RNA polymerase II CTD phosphatase [Source:NCBI gene;Acc:419410]
40. URI1 ENSGALG00000004506 6024 0.939 - - - - - - - 0.939 - - URI1, prefoldin like chaperone [Source:HGNC Symbol;Acc:HGNC:13236]
41. CDC42SE2 ENSGALG00000027258 4725 0.938 - - - - - - - 0.938 - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
42. ING4 ENSGALG00000014457 5561 0.937 - - - - - - - 0.937 - - inhibitor of growth family member 4 [Source:NCBI gene;Acc:418281]
43. ANGPTL2 ENSGALG00000000927 2580 0.936 - - - - - - - 0.936 - - angiopoietin-like 2 [Source:NCBI gene;Acc:776031]
44. CYFIP1 ENSGALG00000016736 6701 0.936 - - - - - - - 0.936 - - cytoplasmic FMR1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:13759]
45. TSG101 ENSGALG00000006312 8289 0.936 - - - - - - - 0.936 - - tumor susceptibility gene 101 [Source:NCBI gene;Acc:423082]
46. BOD1L1 ENSGALG00000026470 9250 0.935 - - - - - - - 0.935 - - biorientation of chromosomes in cell division 1 like 1 [Source:HGNC Symbol;Acc:HGNC:31792]
47. UTP3 ENSGALG00000011553 8814 0.935 - - - - - - 0.935 - - - UTP3, small subunit processome component homolog (S. cerevisiae)
48. DGCR2 ENSGALG00000005891 8405 0.934 - - - - - - - 0.934 - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
49. ICT1 ICT1 11725 0.934 - - - - - - 0.934 - - -
50. MCM2 ENSGALG00000006037 13458 0.933 - - - - - - - 0.933 - - minichromosome maintenance complex component 2 [Source:NCBI gene;Acc:416027]
51. EIF4E2 ENSGALG00000007919 8163 0.933 - - - - - - - 0.933 - - eukaryotic translation initiation factor 4E family member 2 [Source:HGNC Symbol;Acc:HGNC:3293]
52. FUNDC1 ENSGALG00000028187 10511 0.932 - - - - - - 0.932 - - - FUN14 domain containing 1 [Source:NCBI gene;Acc:418558]
53. TIMM10 ENSGALG00000004845 31395 0.932 - - - - - - - 0.932 - - translocase of inner mitochondrial membrane 10 [Source:NCBI gene;Acc:425202]
54. ALDH4A1 ENSGALG00000042184 9432 0.93 - - - - - - 0.930 - - - aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
55. EIF2AK2 ENSGALG00000010560 749 0.929 - - 0.929 - - - - - - - eukaryotic translation initiation factor 2 alpha kinase 2 [Source:NCBI gene;Acc:395147]
56. NCAPD2 ENSGALG00000039448 8658 0.929 - - - - - - - 0.929 - - non-SMC condensin I complex subunit D2 [Source:NCBI gene;Acc:418275]
57. PSMG3 ENSGALG00000004203 11240 0.928 - - - - - - 0.928 - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
58. RWDD3 ENSGALG00000038421 10909 0.927 - - - - - - - 0.927 - - RWD domain containing 3 [Source:NCBI gene;Acc:424481]
59. MFGE8 ENSGALG00000006702 6976 0.926 - - - - - - 0.926 - - - milk fat globule-EGF factor 8 protein [Source:NCBI gene;Acc:415494]
60. WBSCR17 581 0.925 - - 0.925 - - - - - - - Williams-Beuren syndrome chromosome region 17, transcript variant X1
61. CCDC58 ENSGALG00000014413 9022 0.925 - - - - - - 0.925 - - - coiled-coil domain containing 58 [Source:NCBI gene;Acc:418269]
62. XPA ENSGALG00000028998 8621 0.924 - - - - - - 0.924 - - - XPA, DNA damage recognition and repair factor [Source:NCBI gene;Acc:395659]
63. TPMT ENSGALG00000012687 9537 0.924 - - - - - - - 0.924 - - thiopurine S-methyltransferase [Source:HGNC Symbol;Acc:HGNC:12014]
64. EIF1B ENSGALG00000038646 9508 0.923 - - - - - - - 0.923 - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
65. MCM4 ENSGALG00000012915 13151 0.919 - - - - - - 0.919 - - - minichromosome maintenance complex component 4
66. LRP2 ENSGALG00000010858 363 0.919 - - 0.919 - - - - - - - LDL receptor related protein 2 [Source:HGNC Symbol;Acc:HGNC:6694]
67. SORCS1 ENSGALG00000008465 468 0.918 - - 0.918 - - - - - - - sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]
68. DDX18 ENSGALG00000012147 12463 0.918 - - 0.918 - - - - - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
69. PPP1R7 ENSGALG00000031766 22187 0.918 - - - - - - - 0.918 - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
70. MT1 MT1 218 0.917 - - 0.917 - - - - - - -
71. PDGFRA ENSGALG00000013929 12501 0.916 - - - - - - - 0.916 - - platelet-derived growth factor receptor, alpha polypeptide [Source:NCBI gene;Acc:395509]
72. TMEM200C ENSGALG00000030210 1434 0.916 - - 0.916 - - - - - - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
73. POMC ENSGALG00000016600 99 0.915 - - 0.915 - - - - - - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
74. PLEKHG5 ENSGALG00000027476 42 0.915 - - 0.915 - - - - - - - pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
75. RHOC ENSGALG00000001569 53 0.915 - - 0.915 - - - - - - - ras homolog family member C [Source:NCBI gene;Acc:395869]
76. SNX2 ENSGALG00000005337 590 0.914 - - 0.914 - - - - - - - sorting nexin 2 [Source:NCBI gene;Acc:426797]
77. PDCD4 ENSGALG00000008700 574 0.914 - - 0.914 - - - - - - - programmed cell death 4 [Source:NCBI gene;Acc:374191]
78. GOLGA2 ENSGALG00000004881 677 0.914 - - 0.914 - - - - - - - golgin A2, transcript variant X7
79. CASP1 ENSGALG00000001049 1067 0.914 - - 0.914 - - - - - - - caspase 1, transcript variant X2
80. ENSGALG00000023180 ENSGALG00000023180 83 0.914 - - 0.914 - - - - - - -
81. ARF6 ENSGALG00000026944 22014 0.913 - - - - - - - 0.913 - - ADP ribosylation factor 6 [Source:NCBI gene;Acc:428927]
82. GRIK3 ENSGALG00000002098 111 0.913 - - 0.913 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
83. RPUSD1 ENSGALG00000005315 651 0.913 - - 0.913 - - - - - - - RNA pseudouridylate synthase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14173]
84. TRANK1 ENSGALG00000037629 2268 0.913 - - 0.913 - - - - - - - tetratricopeptide repeat and ankyrin repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:29011]
85. ADAMTS2 ENSGALG00000032974 141 0.913 - - 0.913 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 2 [Source:HGNC Symbol;Acc:HGNC:218]
86. ZFX ENSGALG00000016327 5470 0.912 - - - - - - - 0.912 - - zinc finger protein, X-linked, transcript variant X4
87. PPP4R2 ENSGALG00000007810 15127 0.912 - - - - - - - 0.912 - - protein phosphatase 4 regulatory subunit 2 [Source:NCBI gene;Acc:416098]
88. LZIC ENSGALG00000002616 9052 0.911 - - 0.911 - - - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
89. NLGN1 ENSGALG00000040938 651 0.911 - - 0.911 - - - - - - - neuroligin 1 [Source:NCBI gene;Acc:424980]
90. KIAA0195 KIAA0195 48 0.911 - - 0.911 - - - - - - -
91. MGMT ENSGALG00000042949 53 0.91 - - 0.910 - - - - - - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
92. LHFP 167 0.91 - - 0.910 - - - - - - - lipoma HMGIC fusion partner
93. AP3M1 ENSGALG00000005070 712 0.908 - - 0.908 - - - - - - - adaptor related protein complex 3 subunit mu 1 [Source:NCBI gene;Acc:423736]
94. PVALB1 PVALB1 267 0.908 - - 0.908 - - - - - - -
95. C19H17ORF85 C19H17ORF85 2538 0.907 - - 0.907 - - - - - - -
96. ACOT9 ENSGALG00000016351 330 0.906 - - 0.906 - - - - - - - acyl-CoA thioesterase 9 [Source:NCBI gene;Acc:418600]
97. TMEM9B ENSGALG00000005908 14074 0.906 - - - - - - - 0.906 - - TMEM9 domain family member B [Source:HGNC Symbol;Acc:HGNC:1168]
98. C-MET C-MET 1650 0.906 - - 0.906 - - - - - - -
99. VRTN ENSGALG00000010232 692 0.905 - - 0.905 - - - - - - - vertebrae development associated [Source:HGNC Symbol;Acc:HGNC:20223]
100. C5H14ORF166 C5H14ORF166 24176 0.905 - - 0.905 - - - - - - -

There are 495 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA