Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PTCHD3

Gene Name Gene ID Reads Annotation
PTCHD3 ENSGALG00000023347 5 patched domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24776]











Genes with expression patterns similar to PTCHD3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTCHD3 ENSGALG00000023347 5 5 - - 1.000 1.000 1.000 - 1.000 - - 1.000 patched domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24776]
2. GLT8D2 ENSGALG00000034078 11 1.765 - - - 0.765 1.000 - - - - - glycosyltransferase 8 domain containing 2 [Source:NCBI gene;Acc:418085]
3. VIL1 ENSGALG00000037286 5 1.599 - - 0.790 - - - - - - 0.809 villin 1 [Source:NCBI gene;Acc:396423]
4. TMEM181 ENSGALG00000013737 19 1.507 - - 0.770 - - - - - - 0.737 transmembrane protein 181 [Source:HGNC Symbol;Acc:HGNC:20958]
5. GPR34 ENSGALG00000016227 9 1 - - - - 1.000 - - - - - G protein-coupled receptor 34 [Source:NCBI gene;Acc:771199]
6. CDH20 ENSGALG00000012906 2 1 - - - - 1.000 - - - - - cadherin 20, type 2 [Source:NCBI gene;Acc:373927]
7. KIAA1755 3 1 - - - - 1.000 - - - - - KIAA1755 ortholog, transcript variant X2
8. CHRNA3 ENSGALG00000003014 6 1 - - - 1.000 - - - - - - cholinergic receptor nicotinic alpha 3 subunit [Source:NCBI gene;Acc:386578]
9. LRRN2 ENSGALG00000000639 73 1 - - - 1.000 - - - - - - leucine rich repeat neuronal 2 [Source:HGNC Symbol;Acc:HGNC:16914]
10. ENSGALG00000000382 ENSGALG00000000382 2 1 - - 1.000 - - - - - - -
11. PFN4 ENSGALG00000019866 53 1 - - - - - - 1.000 - - - profilin family member 4 [Source:HGNC Symbol;Acc:HGNC:31103]
12. TRPM6 3 1 - - - 1.000 - - - - - - transient receptor potential cation channel subfamily M member 6, transcript variant X3
13. LOC427545 ENSGALG00000004428 3 1 - - 1.000 - - - - - - - histamine H3 receptor-like
14. KLF15 ENSGALG00000036133 3 1 - - - - 1.000 - - - - - Kruppel like factor 15 [Source:HGNC Symbol;Acc:HGNC:14536]
15. BCL2 ENSGALG00000012885 45 1 - - - - 1.000 - - - - - BCL2, apoptosis regulator [Source:NCBI gene;Acc:396282]
16. ADGB ENSGALG00000012317 28 1 - - - - - - 1.000 - - - androglobin [Source:HGNC Symbol;Acc:HGNC:21212]
17. NME4 ENSGALG00000002688 1 1 - - - - 1.000 - - - - - NME/NM23 nucleoside diphosphate kinase 4 [Source:NCBI gene;Acc:395915]
18. ENPP7 ENSGALG00000013743 6 1 - - - - 1.000 - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 7 [Source:HGNC Symbol;Acc:HGNC:23764]
19. ANKFY1 ENSGALG00000001467 21 1 - - - - - - 1.000 - - - ankyrin repeat and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20763]
20. PTHRP PTHRP 8 1 - - - - - - 1.000 - - -
21. MCMDC2 ENSGALG00000031863 3 1 - - 1.000 - - - - - - - minichromosome maintenance domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26368]
22. IDNK ENSGALG00000012583 3 1 - - - - 1.000 - - - - - IDNK, gluconokinase [Source:HGNC Symbol;Acc:HGNC:31367]
23. MTMR3 ENSGALG00000008051 9 1 - - - - - - 1.000 - - - myotubularin related protein 3 [Source:NCBI gene;Acc:417015]
24. STEAP4 ENSGALG00000008997 8 1 - - - - 1.000 - - - - - STEAP4 metalloreductase [Source:HGNC Symbol;Acc:HGNC:21923]
25. GRB10 ENSGALG00000013100 37 1 - - - - - - 1.000 - - - growth factor receptor bound protein 10 [Source:NCBI gene;Acc:420948]
26. MAPK8IP3 ENSGALG00000029514 57 1 - - - - - - 1.000 - - - mitogen-activated protein kinase 8 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:6884]
27. NFKB2 ENSGALG00000005653 39 1 - - - 1.000 - - - - - - nuclear factor kappa B subunit 2 [Source:NCBI gene;Acc:386574]
28. FBXO11 ENSGALG00000008944 95 1 - - - - 1.000 - - - - - F-box protein 11 [Source:HGNC Symbol;Acc:HGNC:13590]
29. HDAC3 ENSGALG00000002634 130 1 - - - - - - 1.000 - - - histone deacetylase 3 [Source:NCBI gene;Acc:395506]
30. ENSGALG00000001724 ENSGALG00000001724 1 1 - - 1.000 - - - - - - -
31. FAM198A ENSGALG00000037533 7 1 - - - 1.000 - - - - - - family with sequence similarity 198 member A [Source:HGNC Symbol;Acc:HGNC:24485]
32. U5 U5 1 1 - - 1.000 - - - - - - -
33. C1orf131 C1orf131 141 1 - - - - - - 1.000 - - -
34. SNORA63 SNORA63 2 1 - - 1.000 - - - - - - -
35. TMEM45B ENSGALG00000001203 48 1 - - - - - - 1.000 - - - transmembrane protein 45B [Source:HGNC Symbol;Acc:HGNC:25194]
36. ENSGALG00000014620 ENSGALG00000014620 7 1 - - - - - - 1.000 - - -
37. RS1 ENSGALG00000016523 11 1 - - - - - - 1.000 - - - retinoschisin 1 [Source:NCBI gene;Acc:772315]
38. GLRA2 ENSGALG00000016571 10 1 - - - - 1.000 - - - - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
39. CST7 ENSGALG00000008660 1 1 - - - - 1.000 - - - - - cystatin F [Source:NCBI gene;Acc:416716]
40. LSM14B ENSGALG00000005125 31 1 - - - - - - 1.000 - - - LSM family member 14B [Source:HGNC Symbol;Acc:HGNC:15887]
41. C1orf112 ENSGALG00000032743 8 1 - - - - - - 1.000 - - - chromosome 1 open reading frame 112 [Source:HGNC Symbol;Acc:HGNC:25565]
42. CSF2RA ENSGALG00000016693 5 1 - - - - 1.000 - - - - - colony stimulating factor 2 receptor alpha subunit [Source:NCBI gene;Acc:418666]
43. GYS2 ENSGALG00000013265 14 1 - - - - 1.000 - - - - - glycogen synthase 2 [Source:HGNC Symbol;Acc:HGNC:4707]
44. CISH ENSGALG00000002260 1 1 - - 1.000 - - - - - - - cytokine inducible SH2 containing protein [Source:NCBI gene;Acc:395335]
45. CD1A1 CD1A1 12 1 - - - - 1.000 - - - - -
46. ARMC3 ENSGALG00000007864 6 1 - - - 1.000 - - - - - - armadillo repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:30964]
47. SNORD61 SNORD61 12 1 - - - - 1.000 - - - - -
48. CELSR1 ENSGALG00000043355 19 1 - - - - 1.000 - - - - - cadherin EGF LAG seven-pass G-type receptor 1 [Source:HGNC Symbol;Acc:HGNC:1850]
49. SNORA62 SNORA62 11 1 - - - 1.000 - - - - - -
50. ADAMTS10 ENSGALG00000033157 243 1 - - - - - - 1.000 - - - ADAM metallopeptidase with thrombospondin type 1 motif 10 [Source:HGNC Symbol;Acc:HGNC:13201]
51. ENSGALG00000001345 ENSGALG00000001345 5 1 - - 1.000 - - - - - - -
52. C3H6ORF138 C3H6ORF138 2 1 - - - 1.000 - - - - - -
53. OPRK1 ENSGALG00000015269 1 1 - - 1.000 - - - - - - - Gallus gallus opioid receptor kappa 1 (OPRK1), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001318774]
54. ENSGALG00000000307 ENSGALG00000000307 29 1 - - - 1.000 - - - - - -
55. HTR1A ENSGALG00000014742 2 1 - - - 1.000 - - - - - - 5-hydroxytryptamine receptor 1A [Source:NCBI gene;Acc:431581]
56. CIPC ENSGALG00000010390 2 1 - - - - - - 1.000 - - - CLOCK interacting pacemaker [Source:HGNC Symbol;Acc:HGNC:20365]
57. HTR4 ENSGALG00000001383 2 1 - - - - - - 1.000 - - - 5-hydroxytryptamine receptor 4 [Source:HGNC Symbol;Acc:HGNC:5299]
58. GFI1 ENSGALG00000043650 2 1 - - - - 1.000 - - - - - growth factor independent 1 transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:4237]
59. DENND1B ENSGALG00000002246 6 1 - - 1.000 - - - - - - - DENN domain containing 1B [Source:HGNC Symbol;Acc:HGNC:28404]
60. FOXE3 11 1 - - - - 1.000 - - - - - forkhead box E3
61. ATXN10 ENSGALG00000014234 16 1 - - - - 1.000 - - - - - ataxin 10 [Source:HGNC Symbol;Acc:HGNC:10549]
62. AIFM3 ENSGALG00000007720 28 1 - - - - - - 1.000 - - - apoptosis inducing factor, mitochondria associated 3 [Source:HGNC Symbol;Acc:HGNC:26398]
63. CKV6.3 CKV6.3 13 1 - - - 1.000 - - - - - -
64. TRIM50 ENSGALG00000021696 1 1 - - 1.000 - - - - - - - tripartite motif containing 50 [Source:HGNC Symbol;Acc:HGNC:19017]
65. WNT3A ENSGALG00000042657 22 1 - - - - - - 1.000 - - - Wnt family member 3A [Source:NCBI gene;Acc:395396]
66. FAM19A2 ENSGALG00000019361 3 1 - - 1.000 - - - - - - - family with sequence similarity 19 member A2, C-C motif chemokine like [Source:HGNC Symbol;Acc:HGNC:21589]
67. CLDN18 ENSGALG00000006593 77 1 - - - - - - 1.000 - - - claudin 18 [Source:HGNC Symbol;Acc:HGNC:2039]
68. PEAR1 ENSGALG00000028622 127 1 - - - - - - 1.000 - - - platelet endothelial aggregation receptor 1 [Source:HGNC Symbol;Acc:HGNC:33631]
69. PEX5L ENSGALG00000043386 5 1 - - - - - - 1.000 - - - peroxisomal biogenesis factor 5 like [Source:HGNC Symbol;Acc:HGNC:30024]
70. LOC100858797 ENSGALG00000027167 7 1 - - - - - - 1.000 - - - feather keratin 1-like, transcript variant X1
71. ANKDD1A ENSGALG00000007252 1 1 - - - - 1.000 - - - - - ankyrin repeat and death domain containing 1A [Source:NCBI gene;Acc:415525]
72. KCNRG ENSGALG00000017012 4 1 - - 1.000 - - - - - - - potassium channel regulator [Source:HGNC Symbol;Acc:HGNC:18893]
73. ENSGALG00000009151 ENSGALG00000009151 6 1 - - 1.000 - - - - - - -
74. LRCH3 ENSGALG00000007595 21 1 - - - - 1.000 - - - - - leucine rich repeats and calponin homology domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28637]
75. OGFR ENSGALG00000005609 3 1 - - 1.000 - - - - - - - opioid growth factor receptor [Source:HGNC Symbol;Acc:HGNC:15768]
76. FAM155B ENSGALG00000041437 1 1 - - 1.000 - - - - - - - family with sequence similarity 155 member B [Source:HGNC Symbol;Acc:HGNC:30701]
77. RAB17 ENSGALG00000003899 1 1 - - 1.000 - - - - - - - RAB17, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16523]
78. ENSGALG00000025727 ENSGALG00000025727 26 1 - - - - - - 1.000 - - -
79. HS6ST2 ENSGALG00000034250 42 1 - - - - - - 1.000 - - - heparan sulfate 6-O-sulfotransferase 2 [Source:NCBI gene;Acc:395150]
80. CNTNAP1 ENSGALG00000003123 1 1 - - - - 1.000 - - - - - contactin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:8011]
81. MBLAC2 ENSGALG00000014649 16 1 - - - 1.000 - - - - - - metallo-beta-lactamase domain containing 2 [Source:NCBI gene;Acc:431565]
82. BPIFB6 ENSGALG00000006674 1 1 - - 1.000 - - - - - - - BPI fold containing family B member 6 [Source:HGNC Symbol;Acc:HGNC:16504]
83. DOLK ENSGALG00000026007 6 1 - - - 1.000 - - - - - - dolichol kinase [Source:NCBI gene;Acc:417199]
84. MC5R ENSGALG00000032087 2 1 - - - - 1.000 - - - - - melanocortin 5 receptor [Source:NCBI gene;Acc:421047]
85. DDX43 ENSGALG00000015928 6 1 - - - 1.000 - - - - - - DEAD-box helicase 43
86. ENSGALG00000028016 ENSGALG00000028016 4 1 - - - - 1.000 - - - - -
87. LAMB4 ENSGALG00000007917 54 1 - - - - 1.000 - - - - - laminin subunit beta 4 [Source:NCBI gene;Acc:396076]
88. CHIC2 ENSGALG00000013931 21 1 - - - - - - 1.000 - - - cysteine rich hydrophobic domain 2 [Source:HGNC Symbol;Acc:HGNC:1935]
89. ZEB2 ENSGALG00000040465 315 1 - - - - - - 1.000 - - - Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
90. PROSER1 ENSGALG00000017038 8 0.963 - - - 0.963 - - - - - - proline and serine rich 1 [Source:HGNC Symbol;Acc:HGNC:20291]
91. ENSGALG00000012217 ENSGALG00000012217 8 0.943 - - - - - - 0.943 - - -
92. CLDN1 ENSGALG00000026862 28 0.941 - - - 0.941 - - - - - - claudin 1 [Source:NCBI gene;Acc:424910]
93. MIER2 ENSGALG00000001108 25 0.906 - - - - - - - - - 0.906 MIER family member 2 [Source:HGNC Symbol;Acc:HGNC:29210]
94. SLC22A3 ENSGALG00000020002 4 0.902 - - 0.902 - - - - - - - solute carrier family 22 member 3 [Source:HGNC Symbol;Acc:HGNC:10967]
95. THAP1 ENSGALG00000015385 15 0.902 - - 0.902 - - - - - - - THAP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20856]
96. HHLA2 ENSGALG00000022871 19 0.902 - - 0.902 - - - - - - - HERV-H LTR-associating 2 [Source:HGNC Symbol;Acc:HGNC:4905]
97. NCEH1 ENSGALG00000009170 8 0.897 - - 0.897 - - - - - - - neutral cholesterol ester hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:29260]
98. SCUBE2 ENSGALG00000032161 63 0.892 - - - - - - - - - 0.892 signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
99. SNX25 ENSGALG00000010610 31 0.891 - - - - - - 0.891 - - - sorting nexin 25 [Source:HGNC Symbol;Acc:HGNC:21883]
100. STK32A ENSGALG00000029195 27 0.891 - - - - - - 0.891 - - - serine/threonine kinase 32A [Source:NCBI gene;Acc:416351]

There are 102 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA