Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PTCHD1

Gene Name Gene ID Reads Annotation
PTCHD1 ENSGALG00000016358 3882 patched domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26392]











Genes with expression patterns similar to PTCHD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTCHD1 ENSGALG00000016358 3882 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 patched domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26392]
2. EDEM2 ENSGALG00000003128 3338 1.82 - - - - - - 0.967 - - 0.853 ER degradation enhancing alpha-mannosidase like protein 2 [Source:HGNC Symbol;Acc:HGNC:15877]
3. TNFRSF21 ENSGALG00000016719 2762 1.811 - - - - - - 0.978 - - 0.833 TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
4. DHCR7 ENSGALG00000004106 4731 1.752 - - 0.818 - - - 0.934 - - - 7-dehydrocholesterol reductase [Source:NCBI gene;Acc:422982]
5. ZFX ENSGALG00000016327 5470 1.736 - - - - - - 0.985 - - 0.751 zinc finger protein, X-linked, transcript variant X4
6. XPC ENSGALG00000006357 2484 1.733 - - 0.763 - - - 0.970 - - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
7. MAN1A1 ENSGALG00000014878 1061 1.731 - - 0.832 - - - - - - 0.899 mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
8. DCK ENSGALG00000028501 8675 1.724 - - - - - - 0.943 - - 0.781 deoxycytidine kinase [Source:NCBI gene;Acc:422648]
9. AASDHPPT ENSGALG00000027981 1017 1.721 - - - - 0.728 - 0.993 - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
10. BBX ENSGALG00000015353 1281 1.71 - - - - 0.717 - 0.993 - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
11. ATP2B2 ENSGALG00000030908 584 1.709 - - 0.828 - - - - - - 0.881 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
12. TRIP11 ENSGALG00000010763 3146 1.707 - - 0.789 - - - 0.918 - - - thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:HGNC:12305]
13. PDCD4 ENSGALG00000008700 574 1.68 - - 0.756 - - - - - - 0.924 programmed cell death 4 [Source:NCBI gene;Acc:374191]
14. TMEM128 ENSGALG00000014992 6567 1.678 - - 0.772 - - - 0.906 - - - transmembrane protein 128 [Source:NCBI gene;Acc:422845]
15. SUCO ENSGALG00000003081 4116 1.676 - - - - - - 0.962 0.714 - - SUN domain containing ossification factor [Source:HGNC Symbol;Acc:HGNC:1240]
16. PCMTD2 ENSGALG00000005901 1833 1.67 - - 0.818 - - - - - - 0.852 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
17. RASSF8 ENSGALG00000014041 850 1.658 - - 0.799 - - - - - - 0.859 Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
18. ACTL6A ENSGALG00000009061 13013 1.656 - - 0.718 - - - 0.938 - - - actin like 6A [Source:HGNC Symbol;Acc:HGNC:24124]
19. PAXBP1 ENSGALG00000036833 5573 1.638 - - - - 0.709 - 0.929 - - - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
20. DLX5 ENSGALG00000009129 1395 1.636 - - 0.796 - - - - - - 0.840 distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
21. ZNF276 ENSGALG00000000513 2410 1.633 - - 0.781 - - - - - - 0.852 zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
22. FURIN ENSGALG00000008341 2609 1.632 - - 0.881 - - - - - - 0.751 furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
23. CAPN15 ENSGALG00000002018 3353 1.608 - - - - - - - 0.778 - 0.830 calpain 15 [Source:HGNC Symbol;Acc:HGNC:11182]
24. S100A11 ENSGALG00000036711 23454 1.587 - - 0.740 - - - - - - 0.847 S100 calcium binding protein A11 [Source:NCBI gene;Acc:396075]
25. GARNL3 ENSGALG00000000847 3423 1.574 - - 0.775 - - - - - - 0.799 GTPase activating Rap/RanGAP domain like 3 [Source:NCBI gene;Acc:417087]
26. PHF2 ENSGALG00000039208 2003 1.572 - - 0.755 - - - - - - 0.817 PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
27. B3GNT7 ENSGALG00000007701 929 1.557 - - 0.854 - - 0.703 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
28. FBXL17 ENSGALG00000000276 2443 1.548 - - 0.803 - - - - - - 0.745 F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
29. PHIP ENSGALG00000015889 2348 1.538 - - 0.788 - - - - - - 0.750 pleckstrin homology domain interacting protein [Source:HGNC Symbol;Acc:HGNC:15673]
30. PTPN11 ENSGALG00000004821 2658 1.533 - - 0.776 - - - - - - 0.757 protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
31. PON2 ENSGALG00000009689 1416 1.503 - - 0.770 - - - - - - 0.733 paraoxonase 2 [Source:NCBI gene;Acc:395830]
32. CPT1A ENSGALG00000007077 3199 1.499 - - 0.776 - - - - 0.723 - - carnitine palmitoyltransferase 1A [Source:NCBI gene;Acc:423118]
33. WDR36 ENSGALG00000000247 11277 1.499 - - - - - - 0.756 - - 0.743 WD repeat domain 36 [Source:NCBI gene;Acc:415609]
34. ANKRD13C ENSGALG00000031210 2152 1.487 - - - - 0.716 - - - - 0.771 ankyrin repeat domain 13C [Source:HGNC Symbol;Acc:HGNC:25374]
35. YIPF6 ENSGALG00000035973 3333 1.484 - - - - - - - 0.702 - 0.782 Yip1 domain family member 6 [Source:HGNC Symbol;Acc:HGNC:28304]
36. MRPS33 ENSGALG00000028879 17966 1.481 - - - - 0.710 - 0.771 - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
37. NDUFS5 ENSGALG00000003625 27698 1.468 - - 0.761 - - - - 0.707 - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
38. ENSGALG00000020092 ENSGALG00000020092 3067 1.461 - - 0.726 - - - - - - 0.735
39. PCDHGC3 ENSGALG00000028565 18583 1.456 - - - - - - - 0.755 - 0.701 Gallus gallus protocadherin gamma subfamily A, 2 (PCDHGA2), mRNA. [Source:RefSeq mRNA;Acc:NM_001245037]
40. CCNB3 ENSGALG00000025810 2115 1.431 - - 0.730 - - - - - - 0.701 cyclin B3 [Source:NCBI gene;Acc:396167]
41. SCYL3 ENSGALG00000036264 2935 0.995 - - - - - - 0.995 - - - SCY1 like pseudokinase 3 [Source:NCBI gene;Acc:424396]
42. PXMP4 ENSGALG00000003042 1035 0.995 - - - - - - 0.995 - - - peroxisomal membrane protein 4 [Source:HGNC Symbol;Acc:HGNC:15920]
43. TSTA3 ENSGALG00000031525 3391 0.995 - - - - - - 0.995 - - - tissue specific transplantation antigen P35B [Source:NCBI gene;Acc:420292]
44. ANXA6 ENSGALG00000004357 2891 0.994 - - - - - - 0.994 - - - annexin A6 [Source:NCBI gene;Acc:395481]
45. F2RL1 ENSGALG00000014984 565 0.994 - - - - - - 0.994 - - - F2R like trypsin receptor 1 [Source:NCBI gene;Acc:427213]
46. ENSGALG00000026460 ENSGALG00000026460 607 0.994 - - - - - - 0.994 - - -
47. EPS8 295 0.994 - - - - - - 0.994 - - - epidermal growth factor receptor pathway substrate 8, transcript variant X4
48. EFCAB10 ENSGALG00000045949 514 0.994 - - - - - - 0.994 - - - EF-hand calcium binding domain 10 [Source:HGNC Symbol;Acc:HGNC:34531]
49. NFYA ENSGALG00000003247 1894 0.994 - - - - - - 0.994 - - - nuclear transcription factor Y subunit alpha [Source:NCBI gene;Acc:419917]
50. SETD7 ENSGALG00000009800 1230 0.993 - - - - - - 0.993 - - - SET domain containing lysine methyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:30412]
51. UBE2K ENSGALG00000014290 2138 0.993 - - - - - - 0.993 - - - ubiquitin conjugating enzyme E2 K [Source:NCBI gene;Acc:428787]
52. BECN1 ENSGALG00000002973 1569 0.993 - - - - - - 0.993 - - - beclin 1 [Source:NCBI gene;Acc:420018]
53. GKAP1 ENSGALG00000012586 2908 0.992 - - - - - - 0.992 - - - G kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:17496]
54. MLC1 ENSGALG00000040038 206 0.991 - - - - - - 0.991 - - - megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:HGNC Symbol;Acc:HGNC:17082]
55. KDELR3 ENSGALG00000032313 4376 0.991 - - - - - - 0.991 - - - KDEL endoplasmic reticulum protein retention receptor 3 [Source:NCBI gene;Acc:418026]
56. FAIM ENSGALG00000012082 1209 0.991 - - - - - - 0.991 - - - Fas apoptotic inhibitory molecule [Source:HGNC Symbol;Acc:HGNC:18703]
57. VTA1 ENSGALG00000013810 4998 0.99 - - - - - - 0.990 - - - vesicle trafficking 1 [Source:HGNC Symbol;Acc:HGNC:20954]
58. MTRF1L ENSGALG00000013609 1581 0.99 - - - - - - 0.990 - - - mitochondrial translational release factor 1 like [Source:HGNC Symbol;Acc:HGNC:21051]
59. GEMIN5 ENSGALG00000003937 1685 0.99 - - - - - - 0.990 - - - gem nuclear organelle associated protein 5 [Source:HGNC Symbol;Acc:HGNC:20043]
60. FBXO45 ENSGALG00000037281 3936 0.989 - - - - - - 0.989 - - - F-box protein 45 [Source:HGNC Symbol;Acc:HGNC:29148]
61. SLC29A1 ENSGALG00000010182 1522 0.988 - - - - - - 0.988 - - - solute carrier family 29 member 1 (Augustine blood group) [Source:HGNC Symbol;Acc:HGNC:11003]
62. ENSGALG00000001166 ENSGALG00000001166 2013 0.988 - - - - - - 0.988 - - -
63. C18H17ORF106 C18H17ORF106 2355 0.988 - - - - - - 0.988 - - -
64. TBC1D19 ENSGALG00000029673 1868 0.987 - - - - - - 0.987 - - - TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
65. GPATCH2 ENSGALG00000009627 4061 0.987 - - - - - - 0.987 - - - G-patch domain containing 2 [Source:NCBI gene;Acc:421355]
66. DDX54 ENSGALG00000007490 8729 0.987 - - - - - - 0.987 - - - DEAD-box helicase 54 [Source:HGNC Symbol;Acc:HGNC:20084]
67. TAOK3 ENSGALG00000007396 3094 0.986 - - - - - - 0.986 - - - TAO kinase 3 [Source:NCBI gene;Acc:395499]
68. WDR77 ENSGALG00000040864 3766 0.986 - - - - - - 0.986 - - - WD repeat domain 77 [Source:NCBI gene;Acc:419865]
69. CCDC43 ENSGALG00000001022 5462 0.985 - - - - - - 0.985 - - - coiled-coil domain containing 43 [Source:NCBI gene;Acc:419971]
70. XRCC2 ENSGALG00000026865 2214 0.985 - - - - - - 0.985 - - - X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
71. HDHD3 ENSGALG00000044101 6333 0.985 - - - - - - 0.985 - - - haloacid dehalogenase like hydrolase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28171]
72. PHKG1 ENSGALG00000002485 15214 0.984 - - - - - - 0.984 - - - phosphorylase kinase catalytic subunit gamma 1 [Source:NCBI gene;Acc:417543]
73. ENSGALG00000006671 ENSGALG00000006671 4194 0.984 - - - - - - 0.984 - - -
74. BTBD9 ENSGALG00000010131 1870 0.983 - - - - - - 0.983 - - - BTB domain containing 9 [Source:NCBI gene;Acc:421429]
75. SPR ENSGALG00000000067 3456 0.983 - - - - - - 0.983 - - - sepiapterin reductase [Source:HGNC Symbol;Acc:HGNC:11257]
76. SKA3 ENSGALG00000017128 4176 0.982 - - - - - - 0.982 - - - spindle and kinetochore associated complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:20262]
77. CMC1 ENSGALG00000025811 3939 0.982 - - - - - - 0.982 - - - C-X9-C motif containing 1
78. ORC5 ENSGALG00000008175 3426 0.982 - - - - - - 0.982 - - - origin recognition complex subunit 5 [Source:NCBI gene;Acc:417714]
79. NDUFV1 ENSGALG00000042809 6222 0.981 - - - - - - 0.981 - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
80. BYSL ENSGALG00000003467 7555 0.98 - - - - - - 0.980 - - - bystin like [Source:HGNC Symbol;Acc:HGNC:1157]
81. FNTA ENSGALG00000015397 3741 0.98 - - - - - - 0.980 - - - farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
82. DNMT3A ENSGALG00000041454 9607 0.98 - - - - - - 0.980 - - - DNA methyltransferase 3 alpha [Source:NCBI gene;Acc:421991]
83. INPP5E ENSGALG00000001964 3580 0.98 - - - - - - 0.980 - - - inositol polyphosphate-5-phosphatase E [Source:HGNC Symbol;Acc:HGNC:21474]
84. MORC2 2505 0.98 - - - - - - 0.980 - - - MORC family CW-type zinc finger 2, transcript variant X2
85. PISD ENSGALG00000006872 3539 0.979 - - - - - - 0.979 - - - phosphatidylserine decarboxylase [Source:HGNC Symbol;Acc:HGNC:8999]
86. GINS1 ENSGALG00000008538 4786 0.978 - - - - - - 0.978 - - - GINS complex subunit 1 [Source:NCBI gene;Acc:425297]
87. WBP4 ENSGALG00000016949 5858 0.978 - - - - - - 0.978 - - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
88. ZCCHC10 ENSGALG00000036666 5148 0.977 - - - - - - 0.977 - - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
89. UBE4A ENSGALG00000031134 5851 0.976 - - - - - - 0.976 - - - ubiquitination factor E4A [Source:NCBI gene;Acc:419758]
90. HS2ST1 ENSGALG00000028423 4153 0.976 - - - - - - 0.976 - - - heparan sulfate 2-O-sulfotransferase 1 [Source:NCBI gene;Acc:395140]
91. RBFA ENSGALG00000036067 6542 0.976 - - - - - - 0.976 - - - ribosome binding factor A (putative) [Source:NCBI gene;Acc:420806]
92. GPATCH1 ENSGALG00000004839 6455 0.974 - - - - - - 0.974 - - - G-patch domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24658]
93. AKAP17A ENSGALG00000016686 2469 0.974 - - - - - - 0.974 - - - A-kinase anchoring protein 17A [Source:NCBI gene;Acc:418664]
94. PEO1 PEO1 6747 0.973 - - - - - - 0.973 - - -
95. NDP ENSGALG00000016222 1067 0.973 - - - - - - 0.973 - - - NDP, norrin cystine knot growth factor [Source:NCBI gene;Acc:418560]
96. ZNF335 ENSGALG00000041370 4740 0.972 - - - - - - 0.972 - - - zinc finger protein 335 [Source:NCBI gene;Acc:396131]
97. STOML2 STOML2 15566 0.97 - - - - - - 0.970 - - -
98. CWF19L2 ENSGALG00000017171 4590 0.97 - - - - - - 0.970 - - - CWF19 like cell cycle control factor 2 [Source:HGNC Symbol;Acc:HGNC:26508]
99. PEX3 ENSGALG00000013777 3158 0.97 - - - - - - 0.970 - - - peroxisomal biogenesis factor 3
100. JUP ENSGALG00000017414 6920 0.97 - - - - - - 0.970 - - - junction plakoglobin [Source:NCBI gene;Acc:429710]

There are 718 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA