Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PTCH1

Gene Name Gene ID Reads Annotation
PTCH1 ENSGALG00000012620 4840 patched 1 [Source:NCBI gene;Acc:395806]











Genes with expression patterns similar to PTCH1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTCH1 ENSGALG00000012620 4840 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 patched 1 [Source:NCBI gene;Acc:395806]
2. CRCP ENSGALG00000002587 8809 2.359 - - - - - 0.760 - 0.769 - 0.830 CGRP receptor component [Source:NCBI gene;Acc:396022]
3. gga-mir-7476 gga-mir-7476 20209 2.2 - - - - - - 0.706 0.742 - 0.752
4. SLC35B1 ENSGALG00000035057 10683 1.571 - - - - - - - 0.851 - 0.720 solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
5. HS2ST1 ENSGALG00000028423 4153 1.57 - - - - - - - 0.750 - 0.820 heparan sulfate 2-O-sulfotransferase 1 [Source:NCBI gene;Acc:395140]
6. ZFR ENSGALG00000003235 8466 1.564 - - - - - - - 0.792 - 0.772 zinc finger RNA binding protein, transcript variant X3
7. LY6E ENSGALG00000041621 16227 1.562 - - - - - - 0.712 - - 0.850 lymphocyte antigen 6 family member E [Source:NCBI gene;Acc:395550]
8. C26H6ORF89 C26H6ORF89 1826 1.556 - - - - - 0.742 - - - 0.814
9. TMLHE ENSGALG00000007443 3619 1.527 - - - - - - - 0.811 - 0.716 trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
10. CRYM ENSGALG00000002484 3558 1.524 - - - - - - - - 0.740 0.784 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
11. gga-mir-7474 ENSGALG00000033766 5727 1.51 - - - - - 0.787 0.723 - - - gga-mir-7474 [Source:miRBase;Acc:MI0024147]
12. RBBP8 ENSGALG00000014982 3255 1.505 - - - - - - - 0.773 - 0.732 RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
13. PSMC2 ENSGALG00000008236 25980 1.494 - - - - - - - 0.705 - 0.789 proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
14. DIAPH3 ENSGALG00000016937 1069 1.492 - - - - - 0.740 - - - 0.752 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
15. SNRNP48 ENSGALG00000013005 1468 1.491 - - - - - - - - 0.704 0.787 small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]
16. MTMR8 ENSGALG00000007590 6022 1.484 - - - - - - 0.752 - - 0.732 myotubularin related protein 8 [Source:NCBI gene;Acc:422312]
17. ACTC1 ENSGALG00000009844 20914 1.481 - - - 0.705 - - 0.776 - - - actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
18. QDPR ENSGALG00000030070 6953 1.481 - - - - - - - 0.732 - 0.749 quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
19. BTAF1 ENSGALG00000030598 3556 1.479 - - - - - 0.720 - 0.759 - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
20. ASAP2 ENSGALG00000016419 1393 1.472 - - - - - 0.731 - - - 0.741 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
21. SALL4 ENSGALG00000041365 6760 1.47 - - - - - - 0.754 0.716 - - spalt like transcription factor 4 [Source:NCBI gene;Acc:769286]
22. GCSH ENSGALG00000032679 29231 1.467 - - - - - - - 0.723 - 0.744 glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
23. RGMA ENSGALG00000039173 12874 1.467 - - 0.757 - - - 0.710 - - - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
24. FBXO3 ENSGALG00000034029 15089 1.464 - - - - - - 0.703 0.761 - - F-box protein 3 [Source:HGNC Symbol;Acc:HGNC:13582]
25. EMP2 ENSGALG00000027058 3925 1.453 - - - - - 0.743 - - - 0.710 epithelial membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:3334]
26. BET1 ENSGALG00000024485 2451 1.449 - - - - - 0.712 - - - 0.737 Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
27. ABL ABL 9532 1.444 - - - - - - 0.725 - 0.719 -
28. FANCB ENSGALG00000016569 1193 1.428 - - - - - - - - 0.724 0.704 FA complementation group B [Source:NCBI gene;Acc:418628]
29. SMDT1 ENSGALG00000011897 9360 1.403 - - - - - - - - 0.703 0.700 single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
30. ZNF236 ENSGALG00000013657 154 0.899 - - - - - 0.899 - - - - zinc finger protein 236 [Source:HGNC Symbol;Acc:HGNC:13028]
31. FGF7 ENSGALG00000028158 189 0.887 - - - - - 0.887 - - - - fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
32. GDE1 ENSGALG00000006916 1040 0.885 - - - - - 0.885 - - - - glycerophosphodiester phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:29644]
33. VWF ENSGALG00000017272 1012 0.884 - - - - - - - - - 0.884 Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
34. N4BP2 ENSGALG00000014281 3144 0.88 - - - - - - - - - 0.880 NEDD4 binding protein 2, transcript variant X6
35. LOC415478 ENSGALG00000021171 100 0.879 - - - - - 0.879 - - - - transmembrane protein 2-like, transcript variant X2
36. SERPINB1 ENSGALG00000019555 29 0.873 - - - - - 0.873 - - - - serpin family B member 1 [Source:HGNC Symbol;Acc:HGNC:3311]
37. ELAVL1 ENSGALG00000000726 718 0.87 - - - - - 0.870 - - - - ELAV like RNA binding protein 1 [Source:NCBI gene;Acc:395637]
38. C19orf70 ENSGALG00000026847 19315 0.866 - - - - - - - 0.866 - - chromosome 19 open reading frame 70 [Source:HGNC Symbol;Acc:HGNC:33702]
39. SERPINF2 ENSGALG00000002987 236 0.864 - - - - - 0.864 - - - - serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]
40. RASL11B ENSGALG00000013948 201 0.855 - - - - - 0.855 - - - - RAS like family 11 member B [Source:HGNC Symbol;Acc:HGNC:23804]
41. SMOC2 ENSGALG00000011205 340 0.854 - - - - - 0.854 - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
42. PDS5B ENSGALG00000017070 3998 0.853 - - - - - - - - - 0.853 PDS5 cohesin associated factor B [Source:NCBI gene;Acc:418910]
43. GMEB1 ENSGALG00000038488 158 0.85 - - - - - 0.850 - - - - glucocorticoid modulatory element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4370]
44. KDR ENSGALG00000013907 869 0.849 - - - - - - - - - 0.849 kinase insert domain receptor [Source:NCBI gene;Acc:395323]
45. CABLES1 ENSGALG00000014998 1636 0.848 - - - - - - - - - 0.848 Cdk5 and Abl enzyme substrate 1 [Source:HGNC Symbol;Acc:HGNC:25097]
46. CAMSAP2 ENSGALG00000002145 6109 0.84 - - - - - - - - - 0.840 calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
47. GPC3 ENSGALG00000006087 3744 0.839 - - - - - - - 0.839 - - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
48. SPDL1 ENSGALG00000001942 4403 0.839 - - - - - - - - - 0.839 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
49. ADAT2 ENSGALG00000019976 4169 0.838 - - - - - - - 0.838 - - adenosine deaminase, tRNA specific 2
50. MRPS18C ENSGALG00000023191 6293 0.837 - - - - - - - 0.837 - - mitochondrial ribosomal protein S18C [Source:NCBI gene;Acc:770813]
51. NEK7 ENSGALG00000002216 4532 0.836 - - - - - - - 0.836 - - NIMA related kinase 7 [Source:NCBI gene;Acc:424350]
52. CCDC171 ENSGALG00000015103 349 0.835 - - - - - 0.835 - - - - coiled-coil domain containing 171 [Source:HGNC Symbol;Acc:HGNC:29828]
53. EVC2 ENSGALG00000015029 51 0.835 - - - - - 0.835 - - - - EvC ciliary complex subunit 2 [Source:NCBI gene;Acc:770095]
54. CDKN2AIP ENSGALG00000010661 1218 0.835 - - - - - - - - - 0.835 CDKN2A interacting protein [Source:HGNC Symbol;Acc:HGNC:24325]
55. ZBED4 ENSGALG00000032659 5313 0.835 - - - - - - - - - 0.835 zinc finger BED-type containing 4 [Source:NCBI gene;Acc:417734]
56. ECI2 ENSGALG00000012809 3692 0.832 - - - - - - - - - 0.832 enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
57. CCNE2 ENSGALG00000040794 1229 0.832 - - - - - - - - - 0.832 cyclin E2 [Source:NCBI gene;Acc:420231]
58. FOCAD ENSGALG00000015071 3677 0.831 - - - - - - - - - 0.831 focadhesin [Source:NCBI gene;Acc:427233]
59. KLHL7 ENSGALG00000010938 528 0.831 - - - - - - - - - 0.831 kelch like family member 7 [Source:NCBI gene;Acc:420612]
60. PRKDC ENSGALG00000042469 449 0.83 - - - - - 0.830 - - - - protein kinase, DNA-activated, catalytic polypeptide [Source:NCBI gene;Acc:395376]
61. ENSGALG00000014545 ENSGALG00000014545 285 0.83 - - - - - 0.830 - - - -
62. MRRF ENSGALG00000001333 2102 0.829 - - - - - 0.829 - - - - mitochondrial ribosome recycling factor [Source:NCBI gene;Acc:417110]
63. 5 5 4209 0.828 - - - - - - - - - 0.828
64. GORASP1 ENSGALG00000006033 4033 0.827 - - - - - - - - - 0.827 golgi reassembly stacking protein 1 [Source:NCBI gene;Acc:420426]
65. ERCC6 ENSGALG00000006254 3452 0.826 - - - - - - - - - 0.826 ERCC excision repair 6, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:3438]
66. LPCAT2 ENSGALG00000003574 893 0.823 - - - - - - - - - 0.823 lysophosphatidylcholine acyltransferase 2 [Source:NCBI gene;Acc:415716]
67. LEMD3 ENSGALG00000009873 347 0.821 - - - - - 0.821 - - - - LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]
68. NUBP1 ENSGALG00000007241 3791 0.819 - - - - - - - - - 0.819 nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
69. E4F1 ENSGALG00000005900 1814 0.818 - - - - - 0.818 - - - - E4F transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:3121]
70. DBT ENSGALG00000005280 2893 0.818 - - - - - 0.818 - - - - dihydrolipoamide branched chain transacylase E2 [Source:NCBI gene;Acc:395374]
71. CHCHD1 ENSGALG00000028809 9955 0.818 - - - - - - - 0.818 - - coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23518]
72. MRPL53 ENSGALG00000037867 6100 0.817 - - - - - - - 0.817 - - mitochondrial ribosomal protein L53 [Source:NCBI gene;Acc:420196]
73. SRP14 ENSGALG00000009592 17828 0.816 - - - - - - - 0.816 - - signal recognition particle 14 [Source:NCBI gene;Acc:423284]
74. ADNP2 ENSGALG00000035669 318 0.816 - - - - - 0.816 - - - - ADNP homeobox 2 [Source:HGNC Symbol;Acc:HGNC:23803]
75. FGD4 ENSGALG00000012932 50 0.816 - - - - - 0.816 - - - - FYVE, RhoGEF and PH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19125]
76. QKI ENSGALG00000011555 1275 0.815 - - - - - - - - - 0.815 QKI, KH domain containing RNA binding [Source:NCBI gene;Acc:374204]
77. WFDC1 ENSGALG00000005503 6152 0.815 - - - - - - - - - 0.815 WAP four-disulfide core domain 1 [Source:NCBI gene;Acc:395238]
78. STRADA ENSGALG00000000550 6912 0.815 - - - - - - - - - 0.815 STE20-related kinase adaptor alpha [Source:NCBI gene;Acc:419957]
79. CACHD1 ENSGALG00000011024 2036 0.814 - - - - - - - - - 0.814 cache domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29314]
80. FAM177A1 ENSGALG00000010046 4318 0.813 - - - - - 0.813 - - - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
81. SUV39H2 ENSGALG00000013920 4360 0.812 - - - - - - - - - 0.812 suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
82. PPFIA1 ENSGALG00000035774 5258 0.811 - - - - - - - - - 0.811 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
83. ACADL ENSGALG00000002891 8058 0.808 - - - - - - - - - 0.808 acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:424005]
84. SCAMP5 ENSGALG00000014116 8877 0.808 - - - - - - - 0.808 - - secretory carrier membrane protein 5 [Source:HGNC Symbol;Acc:HGNC:30386]
85. RARS ENSGALG00000001850 23283 0.807 - - - - - - - 0.807 - - arginyl-tRNA synthetase [Source:NCBI gene;Acc:416168]
86. HJURP ENSGALG00000015363 54 0.807 - - - - - 0.807 - - - - Holliday junction recognition protein [Source:NCBI gene;Acc:418413]
87. SLC25A17 ENSGALG00000012013 13948 0.806 - - - - - - - 0.806 - - solute carrier family 25 member 17 [Source:HGNC Symbol;Acc:HGNC:10987]
88. HSPA12A ENSGALG00000009248 7783 0.806 - - - - - - - - - 0.806 heat shock protein family A (Hsp70) member 12A [Source:HGNC Symbol;Acc:HGNC:19022]
89. KIF7 ENSGALG00000006611 33 0.805 - - - - - 0.805 - - - - kinesin family member 7 [Source:HGNC Symbol;Acc:HGNC:30497]
90. SH2D1B ENSGALG00000028448 17 0.805 - - - - - 0.805 - - - - SH2 domain containing 1B [Source:NCBI gene;Acc:418411]
91. CDH5 ENSGALG00000032349 8526 0.805 - - - - - - - - - 0.805 cadherin 5 [Source:NCBI gene;Acc:374068]
92. DOCK1 ENSGALG00000042259 5438 0.805 - - - - - - - - - 0.805 dedicator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:2987]
93. GPX8 ENSGALG00000026704 4497 0.804 - - - - - - - - - 0.804 glutathione peroxidase 8 (putative) [Source:HGNC Symbol;Acc:HGNC:33100]
94. SMC4 ENSGALG00000009553 15715 0.804 - - - - - - - - - 0.804 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
95. OLFML1 ENSGALG00000027184 19 0.804 - - - - - 0.804 - - - - olfactomedin like 1 [Source:HGNC Symbol;Acc:HGNC:24473]
96. OAT ENSGALG00000031158 10249 0.803 - - - - - 0.803 - - - - ornithine aminotransferase [Source:NCBI gene;Acc:426430]
97. ALMS1 ENSGALG00000044620 570 0.803 - - - - - - - - - 0.803 ALMS1, centrosome and basal body associated protein, transcript variant X1
98. CCNA2 ENSGALG00000011881 2574 0.802 - - - - - - - - - 0.802 cyclin A2 [Source:NCBI gene;Acc:396172]
99. MURC 3759 0.801 - - - - - - 0.801 - - - muscle related coiled-coil protein
100. HOTAIRM1 HOTAIRM1 4335 0.801 - - - - - - - - - 0.801

There are 514 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA