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Results for PTCD3

Gene Name Gene ID Reads Annotation
PTCD3 ENSGALG00000015773 3059 pentatricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:24717]











Genes with expression patterns similar to PTCD3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTCD3 ENSGALG00000015773 3059 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pentatricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:24717]
2. ZCCHC8 ENSGALG00000004486 3201 1.88 - - 0.882 - - - - 0.998 - - zinc finger CCHC-type containing 8 [Source:NCBI gene;Acc:416862]
3. ZNF639 ENSGALG00000005944 6387 1.824 - - 0.935 - - - - 0.889 - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
4. LYPLA2 ENSGALG00000004002 3939 1.759 - - 0.861 - - - - 0.898 - - lysophospholipase II [Source:NCBI gene;Acc:419685]
5. DACH1 ENSGALG00000037015 5648 1.726 - - 0.827 - - - - 0.899 - - dachshund family transcription factor 1 [Source:NCBI gene;Acc:373935]
6. NDUFAF2 ENSGALG00000027564 7302 1.724 - - - - - - 0.830 0.894 - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
7. COG7 ENSGALG00000006156 4072 1.72 - - 0.874 - - - - 0.846 - - component of oligomeric golgi complex 7 [Source:NCBI gene;Acc:416578]
8. EGLN1 ENSGALG00000041422 11032 1.709 - - - - - - 0.735 0.974 - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
9. HCFC2 ENSGALG00000029616 4525 1.705 - - 0.813 - - - - 0.892 - - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
10. DHFR ENSGALG00000026757 18478 1.687 - - 0.820 - - - - 0.867 - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
11. ABL ABL 9532 1.666 - - - - - - 0.792 0.874 - -
12. SPCS3 ENSGALG00000010839 19106 1.637 - - 0.853 - - - 0.784 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
13. SMC4 ENSGALG00000009553 15715 1.634 - - 0.855 - - - 0.779 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
14. GALNT1 ENSGALG00000013135 13583 1.622 - - - - - - 0.754 0.868 - - polypeptide N-acetylgalactosaminyltransferase 1 [Source:NCBI gene;Acc:420955]
15. RBM25 ENSGALG00000009332 10842 1.62 - - 0.844 - - - - 0.776 - - RNA binding motif protein 25 [Source:NCBI gene;Acc:423250]
16. UBE2B ENSGALG00000032664 6069 1.615 - - 0.878 - - - 0.737 - - - ubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]
17. BAG2 ENSGALG00000026605 3898 1.614 - - 0.848 - - - 0.766 - - - BCL2 associated athanogene 2
18. WTAP ENSGALG00000011660 10811 1.603 - - 0.859 - - - - 0.744 - - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
19. DNM1L ENSGALG00000012929 6174 1.59 - - 0.786 - - - 0.804 - - - dynamin 1 like [Source:NCBI gene;Acc:418132]
20. BORA ENSGALG00000016931 3660 1.59 - - 0.831 - - - 0.759 - - - bora, aurora kinase A activator [Source:NCBI gene;Acc:769298]
21. C6ORF162 C6ORF162 4217 1.584 - - 0.865 - - - 0.719 - - -
22. METTL5 ENSGALG00000009676 3252 1.583 - - 0.844 - - - 0.739 - - - methyltransferase like 5 [Source:HGNC Symbol;Acc:HGNC:25006]
23. ST5 6869 1.582 - - - - - - 0.702 0.880 - - suppression of tumorigenicity 5, transcript variant X1
24. NUPL1 NUPL1 8197 1.575 - - 0.784 - - - - 0.791 - -
25. UBR2 ENSGALG00000009906 7717 1.568 - - 0.867 - - - 0.701 - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
26. ATG5 ENSGALG00000015387 7752 1.543 - - 0.835 - - - 0.708 - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
27. CBLL1 ENSGALG00000038981 6725 1.539 - - 0.749 - - - 0.790 - - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
28. SDHD ENSGALG00000007878 25129 1.538 - - - - - - 0.816 0.722 - - succinate dehydrogenase complex subunit D [Source:NCBI gene;Acc:419793]
29. COPB2 ENSGALG00000005357 15208 1.512 - - - - - - 0.757 0.755 - - coatomer protein complex subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:2232]
30. SPTLC1 ENSGALG00000013493 3918 1.494 - - 0.775 - - - 0.719 - - - serine palmitoyltransferase long chain base subunit 1 [Source:HGNC Symbol;Acc:HGNC:11277]
31. HCCS ENSGALG00000005571 4939 1.493 - - 0.771 - - - 0.722 - - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
32. PSMB2 ENSGALG00000026421 51885 1.48 - - 0.764 - - - 0.716 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
33. LIPA ENSGALG00000006378 4414 1.479 - - 0.752 - - - 0.727 - - - lipase A, lysosomal acid type [Source:HGNC Symbol;Acc:HGNC:6617]
34. AKAP1 ENSGALG00000005575 12051 1.479 - - 0.749 - - - 0.730 - - - A-kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:367]
35. MRPL24 ENSGALG00000030994 24264 1.468 - - - - - - 0.741 0.727 - - mitochondrial ribosomal protein L24 [Source:HGNC Symbol;Acc:HGNC:14037]
36. SUCLG2 ENSGALG00000007652 9688 1.465 - - 0.725 - - - 0.740 - - - succinate-CoA ligase GDP-forming beta subunit [Source:NCBI gene;Acc:416087]
37. PCNT ENSGALG00000007021 6428 1.454 - - 0.733 - - - 0.721 - - - pericentrin [Source:HGNC Symbol;Acc:HGNC:16068]
38. ERCC6 ENSGALG00000006254 3452 1.445 - - 0.736 - - - 0.709 - - - ERCC excision repair 6, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:3438]
39. SCCPDH ENSGALG00000010641 8624 1.443 - - 0.712 - - - 0.731 - - - saccharopine dehydrogenase (putative) [Source:NCBI gene;Acc:421485]
40. DKC1 ENSGALG00000005054 30350 1.426 - - 0.704 - - - 0.722 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
41. TBX3 ENSGALG00000036043 2888 1.418 - - 0.715 - - - 0.703 - - - T-box 3 [Source:NCBI gene;Acc:374202]
42. SAMHD1 ENSGALG00000001231 5218 0.974 - - - - - - - 0.974 - - SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 [Source:NCBI gene;Acc:419125]
43. RECQL ENSGALG00000013174 1323 0.958 - - 0.958 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
44. RALGAPA2 240 0.955 - - 0.955 - - - - - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
45. MAPRE3 ENSGALG00000031726 191 0.953 - - 0.953 - - - - - - - microtubule associated protein RP/EB family member 3 [Source:HGNC Symbol;Acc:HGNC:6892]
46. ATF7IP ENSGALG00000011814 1571 0.952 - - 0.952 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
47. TMEM242 ENSGALG00000013689 377 0.95 - - 0.950 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
48. WAPAL WAPAL 625 0.95 - - 0.950 - - - - - - -
49. PCYT1B 190 0.948 - - 0.948 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
50. RFK ENSGALG00000033558 1364 0.948 - - 0.948 - - - - - - - riboflavin kinase, transcript variant X3
51. STXBP6 ENSGALG00000009847 224 0.947 - - 0.947 - - - - - - - syntaxin binding protein 6 [Source:NCBI gene;Acc:423299]
52. TUBA4A ENSGALG00000000433 1367 0.946 - - 0.946 - - - - - - - tubulin alpha 4a
53. U4 U4 69 0.946 - - 0.946 - - - - - - -
54. OSGIN2 ENSGALG00000042840 83 0.946 - - 0.946 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
55. C18orf8 C18orf8 1512 0.945 - - 0.945 - - - - - - -
56. SLC3A1 ENSGALG00000009973 608 0.945 - - 0.945 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
57. ENSGALG00000028964 ENSGALG00000028964 46 0.945 - - 0.945 - - - - - - -
58. CDC14B ENSGALG00000012627 110 0.945 - - 0.945 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
59. TRIM13 ENSGALG00000017011 92 0.944 - - 0.944 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
60. RQCD1 RQCD1 110 0.944 - - 0.944 - - - - - - -
61. TDRD6 48 0.944 - - 0.944 - - - - - - - tudor domain containing 6
62. UEVLD ENSGALG00000006342 164 0.944 - - 0.944 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
63. ITGB4 ENSGALG00000002389 44 0.944 - - 0.944 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
64. MRC2 ENSGALG00000000461 48 0.944 - - 0.944 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
65. LRRC42 ENSGALG00000010743 384 0.944 - - 0.944 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
66. BBX ENSGALG00000015353 1281 0.943 - - 0.943 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
67. ENSGALG00000002020 ENSGALG00000002020 183 0.943 - - 0.943 - - - - - - -
68. MED12 ENSGALG00000036322 814 0.943 - - 0.943 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
69. IFT81 ENSGALG00000003854 2534 0.943 - - 0.943 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
70. SZT2 ENSGALG00000028561 255 0.942 - - 0.942 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
71. ENSGALG00000004703 ENSGALG00000004703 112 0.942 - - 0.942 - - - - - - -
72. ABCC3 ENSGALG00000007522 340 0.942 - - 0.942 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
73. ITM2B ENSGALG00000016996 1112 0.941 - - 0.941 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
74. GTF2H2 ENSGALG00000002399 2361 0.941 - - 0.941 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
75. CHAMP1 ENSGALG00000016813 508 0.941 - - 0.941 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
76. CLEC16A ENSGALG00000007167 66 0.941 - - 0.941 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
77. L3MBTL3 ENSGALG00000034030 113 0.941 - - 0.941 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
78. ENSGALG00000020103 ENSGALG00000020103 64 0.941 - - 0.941 - - - - - - -
79. TCTN2 ENSGALG00000023683 3596 0.94 - - 0.940 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
80. AKAP10 ENSGALG00000004679 103 0.94 - - 0.940 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
81. FBXL5 ENSGALG00000014510 245 0.94 - - 0.940 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
82. STAMBP ENSGALG00000042555 1362 0.939 - - 0.939 - - - - - - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
83. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.939 - - 0.939 - - - - - - -
84. NXPE3 ENSGALG00000015344 111 0.939 - - 0.939 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
85. BAG5 ENSGALG00000031062 4498 0.938 - - 0.938 - - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
86. PRUNE PRUNE 452 0.938 - - 0.938 - - - - - - -
87. SLK ENSGALG00000008318 2220 0.938 - - 0.938 - - - - - - - STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
88. TTPAL ENSGALG00000004244 2734 0.938 - - 0.938 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
89. F2R ENSGALG00000014983 106 0.938 - - 0.938 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
90. RPS6KB1 ENSGALG00000005198 169 0.938 - - 0.938 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
91. PTDSS2 ENSGALG00000004300 682 0.938 - - 0.938 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
92. DBN1 ENSGALG00000033405 216 0.937 - - 0.937 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
93. LRRC71 ENSGALG00000027351 695 0.937 - - 0.937 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
94. SMARCAD1 ENSGALG00000037339 149 0.935 - - 0.935 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
95. ABCE1 ENSGALG00000009961 958 0.935 - - 0.935 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
96. BBS5 ENSGALG00000009846 344 0.935 - - 0.935 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
97. GDPD4 ENSGALG00000000690 824 0.935 - - 0.935 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
98. CHGA ENSGALG00000010820 1028 0.934 - - 0.934 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
99. KCTD3 ENSGALG00000009678 335 0.934 - - 0.934 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
100. TUBGCP3 ENSGALG00000016836 332 0.934 - - 0.934 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]

There are 756 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA