Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PTBP3

Gene Name Gene ID Reads Annotation
PTBP3 ENSGALG00000015669 16 polypyrimidine tract binding protein 3 [Source:HGNC Symbol;Acc:HGNC:10253]











Genes with expression patterns similar to PTBP3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTBP3 ENSGALG00000015669 16 5 - - 1.000 1.000 1.000 - - 1.000 - 1.000 polypyrimidine tract binding protein 3 [Source:HGNC Symbol;Acc:HGNC:10253]
2. FANCF ENSGALG00000003660 25 1.659 - - - - 0.816 - - 0.843 - - FA complementation group F [Source:HGNC Symbol;Acc:HGNC:3587]
3. GAB3 ENSGALG00000008408 19 1.639 - - 0.823 - 0.816 - - - - - GRB2 associated binding protein 3 [Source:HGNC Symbol;Acc:HGNC:17515]
4. Metazoa Metazoa 5 1 - - - 1.000 - - - - - -
5. LAMP3 ENSGALG00000008759 2 1 - - - 1.000 - - - - - - lysosomal associated membrane protein 3 [Source:NCBI gene;Acc:424961]
6. ZBTB21 ENSGALG00000016147 13 1 - - - 1.000 - - - - - - zinc finger and BTB domain containing 21 [Source:HGNC Symbol;Acc:HGNC:13083]
7. UBAP1 ENSGALG00000021378 11 1 - - - 1.000 - - - - - - ubiquitin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:12461]
8. CAD19 CAD19 17 1 - - - 1.000 - - - - - -
9. CACNG3 ENSGALG00000038087 12 1 - - - 1.000 - - - - - - calcium voltage-gated channel auxiliary subunit gamma 3 [Source:NCBI gene;Acc:395378]
10. FAM187A ENSGALG00000000918 1 1 - - - 1.000 - - - - - - family with sequence similarity 187 member A, transcript variant X2
11. USP49 ENSGALG00000003461 10 1 - - - 1.000 - - - - - - ubiquitin specific peptidase 49 [Source:HGNC Symbol;Acc:HGNC:20078]
12. ENSGALG00000022751 ENSGALG00000022751 1 1 - - - 1.000 - - - - - -
13. DPP10 ENSGALG00000012156 20 1 - - - 1.000 - - - - - - dipeptidyl peptidase like 10 [Source:HGNC Symbol;Acc:HGNC:20823]
14. ETNK2 ENSGALG00000000557 4 1 - - - 1.000 - - - - - - ethanolamine kinase 2 [Source:HGNC Symbol;Acc:HGNC:25575]
15. SARM1 ENSGALG00000003595 15 1 - - - 1.000 - - - - - - sterile alpha and TIR motif containing 1 [Source:HGNC Symbol;Acc:HGNC:17074]
16. ENSGALG00000018358 ENSGALG00000018358 101 1 - - - 1.000 - - - - - -
17. PRSS56 ENSGALG00000045413 17 1 - - - 1.000 - - - - - - serine protease 56 [Source:HGNC Symbol;Acc:HGNC:39433]
18. MBL2 ENSGALG00000002507 17 1 - - - 1.000 - - - - - - mannose binding lectin 2 [Source:NCBI gene;Acc:374267]
19. CDCP2 ENSGALG00000010752 4 1 - - - 1.000 - - - - - - CUB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:27297]
20. FZD10 ENSGALG00000042003 11 1 - - - 1.000 - - - - - - frizzled class receptor 10 [Source:NCBI gene;Acc:373885]
21. LOC100858814 ENSGALG00000028210 3 1 - - - 1.000 - - - - - - adenine phosphoribosyltransferase-like, transcript variant X1
22. B4GALT2 ENSGALG00000010094 36 1 - - - 1.000 - - - - - - beta-1,4-galactosyltransferase 2 [Source:NCBI gene;Acc:396122]
23. ARHGAP31 ENSGALG00000015077 19 1 - - - 1.000 - - - - - - Rho GTPase activating protein 31 [Source:HGNC Symbol;Acc:HGNC:29216]
24. C1orf112 ENSGALG00000032743 8 1 - - - 1.000 - - - - - - chromosome 1 open reading frame 112 [Source:HGNC Symbol;Acc:HGNC:25565]
25. TRIM66 ENSGALG00000005958 5 1 - - - 1.000 - - - - - - tripartite motif containing 66 [Source:HGNC Symbol;Acc:HGNC:29005]
26. C2orf71 1 1 - - - 1.000 - - - - - - chromosome 2 open reading frame 71
27. TREM-B1 ENSGALG00000003361 8 0.984 - - - - - - - 0.984 - - triggering receptor expressed on myeloid cells B1 [Source:NCBI gene;Acc:768535]
28. ENSGALG00000023027 ENSGALG00000023027 5 0.984 - - - - - - - 0.984 - -
29. GABRA5 ENSGALG00000016744 12 0.984 - - - - - - - 0.984 - - gamma-aminobutyric acid type A receptor alpha5 subunit [Source:HGNC Symbol;Acc:HGNC:4079]
30. ACACB 6 0.984 - - - - - - - 0.984 - - acetyl-CoA carboxylase beta
31. SPATA4 ENSGALG00000010822 4 0.984 - - - - - - - 0.984 - - spermatogenesis associated 4 [Source:NCBI gene;Acc:422571]
32. GTPBP6 ENSGALG00000016717 17 0.984 - - - - - - - 0.984 - - GTP binding protein 6 (putative) [Source:HGNC Symbol;Acc:HGNC:30189]
33. MUC13 7 0.984 - - - - - - - 0.984 - - mucin 13, cell surface associated, transcript variant X10
34. ALKBH3 ENSGALG00000041309 7 0.984 - - - - - - - 0.984 - - alkB homolog 3, alpha-ketoglutaratedependent dioxygenase [Source:NCBI gene;Acc:423169]
35. DBN1 ENSGALG00000033405 216 0.984 - - - - - - - 0.984 - - drebrin 1 [Source:NCBI gene;Acc:396496]
36. snoZ39 snoZ39 2 0.984 - - - - - - - 0.984 - -
37. FAM214B ENSGALG00000002069, ENSGALG00000038279 213 0.984 - - - - - - - 0.984 - - family with sequence similarity 214 member B, transcript variant X14
38. GP5 ENSGALG00000045125 3 0.984 - - - - - - - 0.984 - - glycoprotein V platelet [Source:HGNC Symbol;Acc:HGNC:4443]
39. CDHR1 ENSGALG00000002314 24 0.984 - - - - - - - 0.984 - - cadherin related family member 1 [Source:NCBI gene;Acc:414847]
40. GSAP ENSGALG00000008312 12 0.984 - - - - - - - 0.984 - - gamma-secretase activating protein [Source:HGNC Symbol;Acc:HGNC:28042]
41. SLC30A8 ENSGALG00000034377 3 0.984 - - - - - - - 0.984 - - solute carrier family 30 member 8 [Source:HGNC Symbol;Acc:HGNC:20303]
42. ENSGALG00000023353 ENSGALG00000023353 1 0.984 - - - - - - - 0.984 - -
43. CD101 12 0.984 - - - - - - - 0.984 - - CD101 molecule, transcript variant X4
44. ZNF507 ENSGALG00000004532 78 0.984 - - - - - - - 0.984 - - zinc finger protein 507, transcript variant X2
45. HBP1 ENSGALG00000008050 19 0.984 - - - - - - - 0.984 - - HMG-box transcription factor 1 [Source:NCBI gene;Acc:417705]
46. SOX10 ENSGALG00000012290 3942 0.984 - - - - - - - 0.984 - - SRY-box 10 [Source:NCBI gene;Acc:395573]
47. ENSGALG00000028652 ENSGALG00000028652 65 0.984 - - - - - - - 0.984 - -
48. SUSD1 ENSGALG00000015677 12 0.984 - - - - - - - 0.984 - - sushi domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25413]
49. C1orf228 3 0.984 - - - - - - - 0.984 - - chromosome 1 open reading frame 228, transcript variant X5
50. SFT2D2 ENSGALG00000019228 10 0.984 - - - - - - - 0.984 - - SFT2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25140]
51. GPR17 ENSGALG00000037153 3 0.984 - - - - - - - 0.984 - - G protein-coupled receptor 17 [Source:HGNC Symbol;Acc:HGNC:4471]
52. SWAP70 ENSGALG00000005750 32 0.98 - - - - - - - 0.980 - - switching B cell complex subunit SWAP70 [Source:NCBI gene;Acc:423044]
53. GZMM ENSGALG00000015192 8 0.978 - - 0.978 - - - - - - - granzyme M
54. GABRA2 ENSGALG00000014206 19 0.978 - - - - - - - 0.978 - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
55. DMB1 ENSGALG00000000162 7 0.978 - - 0.978 - - - - - - - major histocompatibility complex, class II, DM beta 1 [Source:NCBI gene;Acc:106182184]
56. PDGFRB ENSGALG00000030613 4 0.978 - - 0.978 - - - - - - - platelet derived growth factor receptor beta [Source:HGNC Symbol;Acc:HGNC:8804]
57. ENSGALG00000012002 ENSGALG00000012002 4 0.978 - - 0.978 - - - - - - -
58. H2B-V H2B-V 24 0.966 - - 0.966 - - - - - - -
59. BDH1B ENSGALG00000006976 9 0.964 - - 0.964 - - - - - - - 3-hydroxybutyrate dehydrogenase, type 1 B, transcript variant X1
60. LOC418544 ENSGALG00000019175 19 0.963 - - 0.963 - - - - - - - cystathionine beta-synthase-like
61. TOM1L2 ENSGALG00000004902 89 0.962 - - - - - - - 0.962 - - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
62. RFXAP ENSGALG00000019087 37 0.956 - - - 0.956 - - - - - - regulatory factor X associated protein [Source:HGNC Symbol;Acc:HGNC:9988]
63. SRRL ENSGALG00000002638 26 0.954 - - - - - - - 0.954 - - serine racemase-like, transcript variant X8
64. NMRAL1 ENSGALG00000029820 29 0.954 - - - - - - - 0.954 - - NmrA like redox sensor 1 [Source:NCBI gene;Acc:416672]
65. INSC ENSGALG00000032558 74 0.952 - - - - - - - 0.952 - - INSC, spindle orientation adaptor protein [Source:HGNC Symbol;Acc:HGNC:33116]
66. TP53I3 ENSGALG00000016502 178 0.952 - - 0.952 - - - - - - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
67. PRKRIR PRKRIR 46 0.952 - - - - - - - 0.952 - -
68. CWH43 ENSGALG00000041921 68 0.947 - - - - - - - - - 0.947 cell wall biogenesis 43 C-terminal homolog [Source:HGNC Symbol;Acc:HGNC:26133]
69. SYN1 SYN1 432 0.947 - - 0.947 - - - - - - -
70. PGF ENSGALG00000026557 33 0.944 - - 0.944 - - - - - - - placental growth factor [Source:HGNC Symbol;Acc:HGNC:8893]
71. ZFYVE26 ENSGALG00000028762 18 0.944 - - 0.944 - - - - - - - zinc finger FYVE-type containing 26 [Source:HGNC Symbol;Acc:HGNC:20761]
72. CYYR1 ENSGALG00000015774 1 0.939 - - - 0.939 - - - - - - cysteine and tyrosine rich 1 [Source:HGNC Symbol;Acc:HGNC:16274]
73. CENPA ENSGALG00000037735 171 0.939 - - - 0.939 - - - - - - centromere protein A [Source:NCBI gene;Acc:100113359]
74. ENSGALG00000020972 ENSGALG00000020972 54 0.939 - - - - - - - 0.939 - -
75. ZP1 ENSGALG00000031916 122 0.937 - - - - - - - 0.937 - - zona pellucida glycoprotein 1 [Source:NCBI gene;Acc:395418]
76. HECTD2 ENSGALG00000038043 177 0.937 - - - - - - - 0.937 - - HECT domain E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:26736]
77. URB2 ENSGALG00000011101 12 0.937 - - - - - - - 0.937 - - URB2 ribosome biogenesis 2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:28967]
78. MAP3K13 ENSGALG00000006655 632 0.937 - - - - - - - 0.937 - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
79. ENSGALG00000023735 ENSGALG00000023735 12 0.937 - - - - - - - 0.937 - -
80. LOC416530 ENSGALG00000005291 207 0.937 - - - - - - - 0.937 - - uncharacterized LOC416530, transcript variant X1
81. ADMP ENSGALG00000037408 24 0.937 - - 0.937 - - - - - - - anti-dorsalizing morphogenetic protein [Source:NCBI gene;Acc:395622]
82. LRRC55 ENSGALG00000029130 21 0.934 - - 0.934 - - - - - - - leucine rich repeat containing 55 [Source:HGNC Symbol;Acc:HGNC:32324]
83. CD200R1A CD200R1A 105 0.933 - - 0.933 - - - - - - -
84. CHGB ENSGALG00000046616 357 0.931 - - - - - - - 0.931 - - chromogranin B [Source:HGNC Symbol;Acc:HGNC:1930]
85. RAB43 ENSGALG00000005021 5 0.93 - - - - - - - 0.930 - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
86. PWWP2B ENSGALG00000010491 30 0.928 - - - - - - - 0.928 - - PWWP domain containing 2B [Source:HGNC Symbol;Acc:HGNC:25150]
87. IGSF10 ENSGALG00000044293 30 0.923 - - - 0.923 - - - - - - immunoglobulin superfamily member 10 [Source:HGNC Symbol;Acc:HGNC:26384]
88. BAP1 ENSGALG00000004366 12 0.923 - - - 0.923 - - - - - - BRCA1 associated protein 1 [Source:NCBI gene;Acc:415944]
89. ZBTB2 ENSGALG00000012966 112 0.923 - - 0.923 - - - - - - - zinc finger and BTB domain containing 2 [Source:NCBI gene;Acc:421635]
90. RAD54L ENSGALG00000010356 7 0.922 - - 0.922 - - - - - - - RAD54-like (S. cerevisiae) [Source:NCBI gene;Acc:424611]
91. BFIV21 BFIV21 30 0.921 - - - - - - - 0.921 - -
92. BBS9 ENSGALG00000031650 13 0.918 - - - - - - - 0.918 - - Bardet-Biedl syndrome 9, transcript variant X5
93. RAD54L2 ENSGALG00000003243 187 0.916 - - - - - - - 0.916 - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
94. IKZF1 ENSGALG00000013086 58 0.916 - - - - - - - 0.916 - - IKAROS family zinc finger 1 [Source:NCBI gene;Acc:395974]
95. NPDC1 ENSGALG00000042635 12 0.916 - - 0.916 - - - - - - - neural proliferation, differentiation and control 1 [Source:HGNC Symbol;Acc:HGNC:7899]
96. PTPRQ ENSGALG00000010935 626 0.906 - - - - - - - 0.906 - - protein tyrosine phosphatase, receptor type Q [Source:HGNC Symbol;Acc:HGNC:9679]
97. ENSGALG00000026756 ENSGALG00000026756 134 0.906 - - - - - - - 0.906 - -
98. SH3BP5 ENSGALG00000039337 17 0.902 - - 0.902 - - - - - - - SH3 domain binding protein 5 [Source:NCBI gene;Acc:420682]
99. THBD ENSGALG00000044442 6 0.9 - - 0.900 - - - - - - - thrombomodulin
100. SPRTN ENSGALG00000011065 24 0.899 - - 0.899 - - - - - - - SprT-like N-terminal domain [Source:HGNC Symbol;Acc:HGNC:25356]

There are 154 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA