Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PTBP2

Gene Name Gene ID Reads Annotation
PTBP2 ENSGALG00000005552 3443 polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]











Genes with expression patterns similar to PTBP2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PTBP2 ENSGALG00000005552 3443 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]
2. TMEM97 ENSGALG00000005702 2037 1 - - - - - - 1.000 - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
3. ENSGALG00000014190 ENSGALG00000014190 5735 1 - - - - - - 1.000 - - -
4. CTU2 4818 1 - - - - - - 1.000 - - - cytosolic thiouridylase subunit 2, transcript variant X3
5. TMEM120B ENSGALG00000004254 2819 1 - - - - - - 1.000 - - - transmembrane protein 120B [Source:NCBI gene;Acc:416847]
6. TMEM62 ENSGALG00000009260 1170 1 - - - - - - 1.000 - - - transmembrane protein 62 [Source:HGNC Symbol;Acc:HGNC:26269]
7. TMC1 ENSGALG00000015145 1180 1 - - - - - - 1.000 - - - transmembrane channel like 1 [Source:NCBI gene;Acc:427255]
8. CAND1 4541 1 - - - - - - 1.000 - - - cullin associated and neddylation dissociated 1
9. BMP3 ENSGALG00000035052 3260 1 - - - - - - 1.000 - - - bone morphogenetic protein 3 [Source:NCBI gene;Acc:422581]
10. ABCC10 2213 1 - - - - - - 1.000 - - - ATP binding cassette subfamily C member 10, transcript variant X10
11. M6PR ENSGALG00000031681 9442 0.999 - - - - - - 0.999 - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
12. HOXD8 ENSGALG00000037272 4338 0.999 - - - - - - 0.999 - - - homeobox D8 [Source:NCBI gene;Acc:396301]
13. EGFLAM ENSGALG00000003726 4588 0.999 - - - - - - 0.999 - - - EGF like, fibronectin type III and laminin G domains, transcript variant X1
14. POLR1C ENSGALG00000010349 7059 0.999 - - - - - - 0.999 - - - RNA polymerase I and III subunit C [Source:NCBI gene;Acc:421452]
15. MRPL32 ENSGALG00000037258 6861 0.999 - - - - - - 0.999 - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
16. MOB3A ENSGALG00000031729 9690 0.998 - - - - - - 0.998 - - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
17. ENSGALG00000004773 ENSGALG00000004773 10418 0.997 - - - - - - 0.997 - - -
18. IMP4 ENSGALG00000029152 11669 0.997 - - - - - - 0.997 - - - IMP4, U3 small nucleolar ribonucleoprotein [Source:NCBI gene;Acc:100857200]
19. PHGDH ENSGALG00000002988 6912 0.996 - - - - - - 0.996 - - - phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8923]
20. EIF3J ENSGALG00000008187 43570 0.995 - - - - - - 0.995 - - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
21. MCM2 ENSGALG00000006037 13458 0.994 - - - - - - 0.994 - - - minichromosome maintenance complex component 2 [Source:NCBI gene;Acc:416027]
22. POLR2D ENSGALG00000002057 14548 0.994 - - - - - - 0.994 - - - RNA polymerase II subunit D [Source:NCBI gene;Acc:424754]
23. CHNTHL1 CHNTHL1 4976 0.991 - - - - - - 0.991 - - -
24. PFDN4 ENSGALG00000007792 26514 0.991 - - - - - - 0.991 - - - prefoldin subunit 4 [Source:NCBI gene;Acc:419337]
25. PRDX6 ENSGALG00000003053 17928 0.991 - - - - - - 0.991 - - - peroxiredoxin 6 [Source:NCBI gene;Acc:429062]
26. ITGA1 ENSGALG00000014891 11378 0.991 - - - - - - 0.991 - - - integrin subunit alpha 1 [Source:NCBI gene;Acc:395951]
27. DDX21 ENSGALG00000004144 13105 0.989 - - - - - - 0.989 - - - DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]
28. FAM103A1 17380 0.987 - - - - - - 0.987 - - - family with sequence similarity 103 member A1, transcript variant X2
29. FBN3 ENSGALG00000037625 23313 0.987 - - - - - - 0.987 - - - fibrillin 3 [Source:HGNC Symbol;Acc:HGNC:18794]
30. DYNLL2 ENSGALG00000005522 17107 0.986 - - - - - - 0.986 - - - dynein light chain LC8-type 2 [Source:NCBI gene;Acc:417663]
31. ATP5MC1 ENSGALG00000001330 37766 0.986 - - - - - - 0.986 - - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
32. SMC2 ENSGALG00000015691 34013 0.979 - - - - - - 0.979 - - - structural maintenance of chromosomes 2 [Source:NCBI gene;Acc:396156]
33. DENR ENSGALG00000003795 30805 0.976 - - - - - - 0.976 - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
34. ALDH1A2 ENSGALG00000004270 49483 0.945 - - - - - - 0.945 - - - aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
35. CALM_1 CALM_1 57812 0.924 - - - - - - 0.924 - - -
36. ATP2A2 ENSGALG00000032287 12734 0.919 - - - - - - 0.919 - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 [Source:NCBI gene;Acc:396446]
37. UQCRFS1 ENSGALG00000025819 66637 0.892 - - - - - - 0.892 - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:NCBI gene;Acc:415752]
38. PARVB ENSGALG00000014201 27559 0.853 - - - - - - 0.853 - - - parvin beta [Source:HGNC Symbol;Acc:HGNC:14653]
39. RB1CC1 ENSGALG00000015259 4211 0.825 - - - - - - - 0.825 - - RB1 inducible coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:15574]
40. POLR2E ENSGALG00000002591 26405 0.823 - - - - - - 0.823 - - - RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
41. CHERP ENSGALG00000003824 11489 0.823 - - - - - - 0.823 - - - calcium homeostasis endoplasmic reticulum protein [Source:NCBI gene;Acc:420144]
42. ZIC1 ENSGALG00000040532 6543 0.804 - - - - - 0.804 - - - - Zic family member 1 [Source:NCBI gene;Acc:374103]
43. NSG1 ENSGALG00000015010 5829 0.797 - - - - - 0.797 - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
44. DLL1 ENSGALG00000011182 1613 0.796 - - - - - 0.796 - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
45. CERCAM ENSGALG00000004986 5158 0.791 - - - - - 0.791 - - - - cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
46. LFNG ENSGALG00000038515 5178 0.789 - - - - - 0.789 - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
47. C17orf75 ENSGALG00000003434 4262 0.785 - - - - - 0.785 - - - - chromosome 17 open reading frame 75 [Source:HGNC Symbol;Acc:HGNC:30173]
48. ZIC3 ENSGALG00000031144 863 0.784 - - - - - 0.784 - - - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
49. ATP6AP1 ENSGALG00000008836 4343 0.782 - - - - - - - 0.782 - - ATPase H+ transporting accessory protein 1 [Source:NCBI gene;Acc:427854]
50. DRAXIN ENSGALG00000004631 3122 0.78 - - - - - 0.780 - - - - dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
51. LIPG ENSGALG00000043734 2490 0.779 - - - - - 0.779 - - - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
52. DENND5B 4077 0.778 - - - - - 0.778 - - - - DENN domain containing 5B, transcript variant X1
53. MGST3 ENSGALG00000003445 50408 0.778 - - - - - - 0.778 - - - microsomal glutathione S-transferase 3 [Source:NCBI gene;Acc:424404]
54. LZIC ENSGALG00000002616 9052 0.775 - - - - - - 0.775 - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
55. NPC2 ENSGALG00000010237 11180 0.774 - - - - - - - 0.774 - - Niemann-Pick disease, type C2 [Source:NCBI gene;Acc:423353]
56. PAX3 ENSGALG00000030944 2987 0.77 - - - - - 0.770 - - - - paired box 3 [Source:NCBI gene;Acc:374127]
57. IL4RA IL4RA 1237 0.769 - - - - - - - 0.769 - -
58. PROS1 ENSGALG00000015409 3685 0.768 - - - - - - - 0.768 - - protein S [Source:HGNC Symbol;Acc:HGNC:9456]
59. ERMN ENSGALG00000020575 46 0.765 - - - - - 0.765 - - - - ermin [Source:HGNC Symbol;Acc:HGNC:29208]
60. PTGFRN ENSGALG00000015464 14584 0.765 - - - - - - - 0.765 - - prostaglandin F2 receptor inhibitor [Source:HGNC Symbol;Acc:HGNC:9601]
61. MAU2 ENSGALG00000002969 10604 0.761 - - - - - - 0.761 - - - MAU2 sister chromatid cohesion factor [Source:HGNC Symbol;Acc:HGNC:29140]
62. LOC416530 ENSGALG00000005291 207 0.76 - - - - - 0.760 - - - - uncharacterized LOC416530, transcript variant X1
63. RALY ENSGALG00000033696 1110 0.76 - - - - - - - 0.760 - - RALY heterogeneous nuclear ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:15921]
64. CRABP-I ENSGALG00000003193 67258 0.755 - - - - - 0.755 - - - - cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
65. MFI2 MFI2 1172 0.755 - - - - - - - 0.755 - -
66. GNG10 ENSGALG00000015683 6905 0.754 - - - - - 0.754 - - - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
67. ARHGAP40 ENSGALG00000003550 484 0.754 - - - - - - - 0.754 - - Rho GTPase activating protein 40 [Source:NCBI gene;Acc:419168]
68. MRPL17 ENSGALG00000002605 46508 0.752 - - - - - - 0.752 - - - mitochondrial ribosomal protein L17 [Source:HGNC Symbol;Acc:HGNC:14053]
69. CXCR4 ENSGALG00000012357 1320 0.752 - - - - - 0.752 - - - - C-X-C motif chemokine receptor 4 [Source:NCBI gene;Acc:395324]
70. WNT4 ENSGALG00000041708 1277 0.751 - - - - - 0.751 - - - - Wnt family member 4 [Source:NCBI gene;Acc:395561]
71. GADD45_1 GADD45_1 1433 0.747 - - - - - - - - - 0.747
72. DPAGT1 ENSGALG00000032420 1491 0.743 - - - - - - - 0.743 - - dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 [Source:HGNC Symbol;Acc:HGNC:2995]
73. U3 U3 1604 0.741 - - - - - - - 0.741 - -
74. FABP7 ENSGALG00000038933 6780 0.741 - - - - - 0.741 - - - - fatty acid binding protein 7 [Source:NCBI gene;Acc:396246]
75. SRGAP3 ENSGALG00000008378 4331 0.74 - - - - - 0.740 - - - - SLIT-ROBO Rho GTPase activating protein 3 [Source:NCBI gene;Acc:416115]
76. MYL4 ENSGALG00000000585 16982 0.735 - - - - - 0.735 - - - - myosin, light chain 4, alkali; atrial, embryonic [Source:NCBI gene;Acc:396472]
77. PCDH8 ENSGALG00000036258 1945 0.735 - - - - - 0.735 - - - - protocadherin 8 [Source:NCBI gene;Acc:428065]
78. PURH PURH 28410 0.735 - - - - - - 0.735 - - -
79. GHOX-7 GHOX-7 2555 0.734 - - - - - 0.734 - - - -
80. ELOVL4 ENSGALG00000015876 853 0.734 - - - - - 0.734 - - - - ELOVL fatty acid elongase 4 [Source:NCBI gene;Acc:421850]
81. SUMO3 ENSGALG00000032783 47823 0.731 - - - - - - 0.731 - - - small ubiquitin-like modifier 3 [Source:NCBI gene;Acc:770553]
82. NPAS3 ENSGALG00000029022 1950 0.73 - - - - - 0.730 - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
83. PDZK1IP1 ENSGALG00000010473 551 0.728 - - - - - - - 0.728 - - PDZK1 interacting protein 1 [Source:NCBI gene;Acc:424619]
84. ARF4 ENSGALG00000005622 50567 0.727 - - - - - - 0.727 - - - ADP ribosylation factor 4 [Source:HGNC Symbol;Acc:HGNC:655]
85. ASTN1 ENSGALG00000004472 855 0.727 - - - - - 0.727 - - - - astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
86. PRNP ENSGALG00000000209 2159 0.725 - - - - - - - 0.725 - - prion protein [Source:NCBI gene;Acc:396452]
87. MMRN1 ENSGALG00000010391 997 0.725 - - - - - - - 0.725 - - multimerin 1 [Source:HGNC Symbol;Acc:HGNC:7178]
88. KDR ENSGALG00000013907 869 0.725 - - - - - - - 0.725 - - kinase insert domain receptor [Source:NCBI gene;Acc:395323]
89. PRKCE ENSGALG00000010000 99 0.724 - - - - - - - 0.724 - - protein kinase C epsilon, transcript variant X1
90. EXO1 ENSGALG00000010748 7572 0.724 - - 0.724 - - - - - - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
91. LMO2 ENSGALG00000029892 4773 0.723 - - - - - - - 0.723 - - LIM domain only 2 [Source:NCBI gene;Acc:374129]
92. PCDHGC3 ENSGALG00000028565 18583 0.723 - - - - - - - 0.723 - - Gallus gallus protocadherin gamma subfamily A, 2 (PCDHGA2), mRNA. [Source:RefSeq mRNA;Acc:NM_001245037]
93. CADM1 ENSGALG00000014582 32973 0.722 - - - - - - 0.722 - - - cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:5951]
94. GPBP1L1 ENSGALG00000010276 10253 0.721 - - - - - - 0.721 - - - GC-rich promoter binding protein 1 like 1 [Source:NCBI gene;Acc:424603]
95. PROCA1 668 0.721 - - - - - - - - - 0.721 protein interacting with cyclin A1
96. BTBD17 ENSGALG00000023359 87 0.72 - - - - - 0.720 - - - - BTB domain containing 17 [Source:HGNC Symbol;Acc:HGNC:33758]
97. PRODH ENSGALG00000007728 1659 0.719 - - - - - - - 0.719 - - proline dehydrogenase 1
98. GABRA3 ENSGALG00000007269 985 0.718 - - - - - 0.718 - - - - gamma-aminobutyric acid type A receptor alpha3 subunit [Source:HGNC Symbol;Acc:HGNC:4077]
99. UBE2D1 ENSGALG00000021213 5876 0.717 - - - - - - - - - 0.717 ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
100. CHN1 ENSGALG00000009293 6415 0.717 - - - - - - - - - 0.717 chimerin 1 [Source:NCBI gene;Acc:429021]

There are 19 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA