Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PSMD4

Gene Name Gene ID Reads Annotation
PSMD4 ENSGALG00000028505 16 proteasome 26S subunit, non-ATPase 4 [Source:NCBI gene;Acc:100216364]











Genes with expression patterns similar to PSMD4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PSMD4 ENSGALG00000028505 16 5 - - 1.000 1.000 - 1.000 1.000 - - 1.000 proteasome 26S subunit, non-ATPase 4 [Source:NCBI gene;Acc:100216364]
2. IKBIP ENSGALG00000026284 31 1.937 - - 0.994 - - 0.943 - - - - IKBKB interacting protein [Source:HGNC Symbol;Acc:HGNC:26430]
3. SLC51A ENSGALG00000007478 6 1.917 - - - - - 0.917 - - - 1.000 solute carrier family 51 alpha subunit [Source:NCBI gene;Acc:424916]
4. ENSGALG00000023084 ENSGALG00000023084 10 1.762 - - - - - 0.762 - - - 1.000
5. MMP9 ENSGALG00000006992 78 1.714 - - 0.972 - - - 0.742 - - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
6. SNX25 ENSGALG00000010610 31 1.679 - - - 0.882 - 0.797 - - - - sorting nexin 25 [Source:HGNC Symbol;Acc:HGNC:21883]
7. ITGB2 ENSGALG00000007511 46 1.666 - - 0.913 - - 0.753 - - - - integrin subunit beta 2 [Source:NCBI gene;Acc:396181]
8. HTR2C ENSGALG00000005853 90 1.645 - - 0.865 - - - - - - 0.780 Gallus gallus 5-hydroxytryptamine receptor 2C (HTR2C), mRNA. [Source:RefSeq mRNA;Acc:NM_001318421]
9. SUFU ENSGALG00000008096 307 1.591 - - - - - 0.849 0.742 - - - SUFU negative regulator of hedgehog signaling [Source:NCBI gene;Acc:374118]
10. CA8 ENSGALG00000039145 109 1.527 - - - - - 0.785 0.742 - - - carbonic anhydrase 8 [Source:HGNC Symbol;Acc:HGNC:1382]
11. CLCN6 ENSGALG00000004590 3 1 - - - 1.000 - - - - - - chloride voltage-gated channel 6 [Source:NCBI gene;Acc:419488]
12. FTO ENSGALG00000041036 11 1 - - - - - - - - - 1.000 FTO, alpha-ketoglutarate dependent dioxygenase [Source:NCBI gene;Acc:415718]
13. ZDHHC3 ENSGALG00000029266 11 1 - - - - - - - - - 1.000 zinc finger DHHC-type containing 3 [Source:HGNC Symbol;Acc:HGNC:18470]
14. PADI3 PADI3 35 1 - - - - - - - - - 1.000
15. TXK ENSGALG00000014127 6 1 - - - - - - - - - 1.000 TXK tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:12434]
16. HOXCDX1L ENSGALG00000007656 53 1 - - - - - - - - - 1.000 homeobox protein CDX-1-like
17. LNP1 ENSGALG00000015287 14 1 - - - - - - - - - 1.000 leukemia NUP98 fusion partner 1 [Source:HGNC Symbol;Acc:HGNC:28014]
18. PSEN2 ENSGALG00000009073 7 1 - - - - - - - - - 1.000 presenilin 2 (Alzheimer disease 4) [Source:NCBI gene;Acc:374188]
19. SNORA3 SNORA3 14 1 - - - - - - - - - 1.000
20. CDKN2C ENSGALG00000010537 2 1 - - - - - - - - - 1.000 cyclin dependent kinase inhibitor 2C [Source:HGNC Symbol;Acc:HGNC:1789]
21. GABRA6 ENSGALG00000001695 3 1 - - - - - - - - - 1.000 gamma-aminobutyric acid type A receptor alpha6 subunit [Source:NCBI gene;Acc:395931]
22. MSH3 ENSGALG00000015589 83 1 - - - - - - 1.000 - - - mutS homolog 3 [Source:HGNC Symbol;Acc:HGNC:7326]
23. ERI3 ENSGALG00000010106 995 1 - - - - - - - - - 1.000 ERI1 exoribonuclease family member 3 [Source:HGNC Symbol;Acc:HGNC:17276]
24. ENSGALG00000005960 ENSGALG00000005960 3 1 - - - 1.000 - - - - - -
25. EPHA2 ENSGALG00000039895 12 1 - - - 1.000 - - - - - - EPH receptor A2 [Source:HGNC Symbol;Acc:HGNC:3386]
26. ASPA ENSGALG00000004669 10 1 - - - 1.000 - - - - - - aspartoacylase [Source:HGNC Symbol;Acc:HGNC:756]
27. ADRA1D ENSGALG00000038787 54 1 - - - - - - - - - 1.000 adrenoceptor alpha 1D
28. ZFYVE21 ENSGALG00000011534 7 1 - - - 1.000 - - - - - - zinc finger FYVE-type containing 21 [Source:NCBI gene;Acc:423486]
29. INPPL1 ENSGALG00000004336 3 1 - - - - - - - - - 1.000 inositol polyphosphate phosphatase like 1 [Source:HGNC Symbol;Acc:HGNC:6080]
30. ZNF330 ENSGALG00000009868 257 1 - - - 1.000 - - - - - - zinc finger protein 330 [Source:NCBI gene;Acc:422453]
31. BACE1 ENSGALG00000007298 3 1 - - - - - - - - - 1.000 beta-secretase 1 [Source:HGNC Symbol;Acc:HGNC:933]
32. CD226 ENSGALG00000013748 0 1 - - - - - - - - - 1.000 CD226 molecule [Source:HGNC Symbol;Acc:HGNC:16961]
33. SNORA44 SNORA44 29 1 - - - 1.000 - - - - - -
34. LOC418667 ENSGALG00000019147 4 1 - - - - - - - - - 1.000 granulocyte-macrophage colony-stimulating factor receptor subunit alpha-like
35. RGS22 ENSGALG00000037997 0 1 - - - - - - - - - 1.000 regulator of G protein signaling 22 [Source:HGNC Symbol;Acc:HGNC:24499]
36. SNORA25 SNORA25 5 1 - - - - - - - - - 1.000
37. DLGAP2 ENSGALG00000032937 2 1 - - - - - - - - - 1.000 DLG associated protein 2 [Source:HGNC Symbol;Acc:HGNC:2906]
38. GNOT1 GNOT1 22 1 - - - - - - - - - 1.000
39. SLC30A1 ENSGALG00000009858 5 1 - - - - - - - - - 1.000 solute carrier family 30 member 1 [Source:HGNC Symbol;Acc:HGNC:11012]
40. ENSGALG00000027956 ENSGALG00000027956 2 1 - - - - - - - - - 1.000
41. TAOK1 ENSGALG00000004082 77 1 - - - - - - 1.000 - - - TAO kinase 1 [Source:HGNC Symbol;Acc:HGNC:29259]
42. LIPI ENSGALG00000015662 4 1 - - - - - - - - - 1.000 lipase member I, transcript variant X1
43. CBR4 ENSGALG00000009714 7 1 - - - - - - - - - 1.000 carbonyl reductase 4 [Source:HGNC Symbol;Acc:HGNC:25891]
44. ESR1 ENSGALG00000012973 3 1 - - - 1.000 - - - - - - estrogen receptor 1 [Source:NCBI gene;Acc:396099]
45. SNORD45 SNORD45 2 1 - - - - - - - - - 1.000
46. C9ORF9 C9ORF9 13 1 - - - - - - - - - 1.000
47. GAL3ST1 ENSGALG00000007781 0 1 - - - - - - - - - 1.000 galactose-3-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:24240]
48. ASPN ENSGALG00000004722 6 1 - - - - - - - - - 1.000 asporin [Source:HGNC Symbol;Acc:HGNC:14872]
49. ENSGALG00000019430 ENSGALG00000019430 32 1 - - - - - - - - - 1.000
50. ACER1 ENSGALG00000001592 1 1 - - - - - - - - - 1.000 alkaline ceramidase 1 [Source:HGNC Symbol;Acc:HGNC:18356]
51. ENSGALG00000002752 ENSGALG00000002752 4 1 - - - - - - - - - 1.000
52. SNORD36 SNORD36 1 1 - - - - - - - - - 1.000
53. TMEM201 ENSGALG00000002527 2 1 - - - - - - - - - 1.000 transmembrane protein 201
54. SNORA81 SNORA81 15 1 - - - - - - - - - 1.000
55. APBB1 ENSGALG00000046164 5 1 - - - - - - - - - 1.000 amyloid beta precursor protein binding family B member 1 [Source:HGNC Symbol;Acc:HGNC:581]
56. PITPNC1L ENSGALG00000002610 3 1 - - - - - - - - - 1.000 phosphatidylinositol transfer protein, cytoplasmic 1-like, transcript variant X2
57. FAM19A2 ENSGALG00000019361 3 1 - - - - - - - - - 1.000 family with sequence similarity 19 member A2, C-C motif chemokine like [Source:HGNC Symbol;Acc:HGNC:21589]
58. PITPNA ENSGALG00000023806, ENSGALG00000035005 8 1 - - - - - - - - - 1.000 phosphatidylinositol transfer protein alpha [Source:HGNC Symbol;Acc:HGNC:9001]
59. ANKRD42 8 0.996 - - 0.996 - - - - - - - ankyrin repeat domain 42
60. SPTSSBL ENSGALG00000026131 70 0.996 - - 0.996 - - - - - - - serine palmitoyltransferase small subunit B-like, transcript variant X6
61. LHX6 ENSGALG00000001347 7 0.996 - - 0.996 - - - - - - - LIM homeobox 6 [Source:HGNC Symbol;Acc:HGNC:21735]
62. ENSGALG00000000407 ENSGALG00000000407 32 0.995 - - 0.995 - - - - - - -
63. PLAG1 ENSGALG00000015407 17 0.993 - - 0.993 - - - - - - - PLAG1 zinc finger [Source:NCBI gene;Acc:429484]
64. ENSGALG00000026975 ENSGALG00000026975 8 0.992 - - 0.992 - - - - - - -
65. LRRC56 ENSGALG00000041955 16 0.992 - - 0.992 - - - - - - - leucine rich repeat containing 56 [Source:HGNC Symbol;Acc:HGNC:25430]
66. HOXA9 ENSGALG00000028983 9298 0.991 - - 0.991 - - - - - - - homeobox A9 [Source:NCBI gene;Acc:396096]
67. MAPKAPK3 ENSGALG00000002283 30 0.991 - - - 0.991 - - - - - - Gallus gallus mitogen-activated protein kinase-activated protein kinase 3 (MAPKAPK3), mRNA. [Source:RefSeq mRNA;Acc:NM_001321558]
68. PTPRO ENSGALG00000013085 26 0.989 - - - 0.989 - - - - - - protein tyrosine phosphatase, receptor type O [Source:NCBI gene;Acc:373911]
69. DNAH7 ENSGALG00000007841 32 0.987 - - 0.987 - - - - - - - dynein axonemal heavy chain 7 [Source:HGNC Symbol;Acc:HGNC:18661]
70. SATB2 ENSGALG00000008135 347 0.986 - - 0.986 - - - - - - - SATB homeobox 2 [Source:NCBI gene;Acc:424063]
71. YDJC ENSGALG00000029198 14 0.985 - - 0.985 - - - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:HGNC Symbol;Acc:HGNC:27158]
72. TMEM230 ENSGALG00000036876 55 0.981 - - 0.981 - - - - - - - transmembrane protein 230 [Source:NCBI gene;Acc:419518]
73. ARSA ENSGALG00000035824 299 0.98 - - - 0.980 - - - - - - arylsulfatase A [Source:HGNC Symbol;Acc:HGNC:713]
74. ENSGALG00000029120 ENSGALG00000029120 73 0.972 - - 0.972 - - - - - - -
75. FNDC7 ENSGALG00000001983 24 0.971 - - 0.971 - - - - - - - fibronectin type III domain containing 7 [Source:HGNC Symbol;Acc:HGNC:26668]
76. RALGPS1_1 ENSGALG00000000906 7 0.968 - - - 0.968 - - - - - - Ral GEF with PH domain and SH3 binding motif 1 [Source:HGNC Symbol;Acc:HGNC:16851]
77. ENSGALG00000006278 ENSGALG00000006278 202 0.964 - - 0.964 - - - - - - -
78. ENSGALG00000021882 ENSGALG00000021882 63 0.963 - - 0.963 - - - - - - -
79. PRKCZ ENSGALG00000001270 12 0.962 - - 0.962 - - - - - - - protein kinase C zeta [Source:HGNC Symbol;Acc:HGNC:9412]
80. VTG1 ENSGALG00000039354 17 0.96 - - - 0.960 - - - - - - vitellogenin 1 [Source:NCBI gene;Acc:424547]
81. CYP3A4 ENSGALG00000004436 75 0.957 - - 0.957 - - - - - - - Gallus gallus cytochrome P450 family 3 subfamily A member 4 (CYP3A4), mRNA. [Source:RefSeq mRNA;Acc:NM_001329508]
82. SLCO4C1 ENSGALG00000026768 30 0.955 - - 0.955 - - - - - - - solute carrier organic anion transporter family member 4C1, transcript variant X4
83. XYLT1 ENSGALG00000006757 169 0.954 - - 0.954 - - - - - - - xylosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:15516]
84. SAMSN1 ENSGALG00000040926 88 0.953 - - 0.953 - - - - - - - SAM domain, SH3 domain and nuclear localization signals 1 [Source:NCBI gene;Acc:418470]
85. ZBTB21 ENSGALG00000016147 13 0.953 - - 0.953 - - - - - - - zinc finger and BTB domain containing 21 [Source:HGNC Symbol;Acc:HGNC:13083]
86. B3GNTL1 ENSGALG00000001433 22 0.952 - - 0.952 - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
87. FAR1 ENSGALG00000005353 12 0.952 - - - 0.952 - - - - - - fatty acyl-CoA reductase 1 [Source:NCBI gene;Acc:423028]
88. TSPAN18 ENSGALG00000036901 14 0.952 - - 0.952 - - - - - - - tetraspanin 18 [Source:NCBI gene;Acc:395586]
89. SUSD4 ENSGALG00000009388 48 0.951 - - 0.951 - - - - - - - sushi domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25470]
90. CYTH4 ENSGALG00000012454 12 0.95 - - - - - - - - - 0.950 cytohesin 4 [Source:NCBI gene;Acc:418043]
91. U6atac U6atac 44 0.946 - - - 0.946 - - - - - -
92. FIBCD1 ENSGALG00000003866 2 0.944 - - - - - 0.944 - - - - fibrinogen C domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25922]
93. LCOR ENSGALG00000028512 30 0.944 - - 0.944 - - - - - - - ligand dependent nuclear receptor corepressor, transcript variant X16
94. DSG2 ENSGALG00000015142 67 0.942 - - 0.942 - - - - - - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
95. REEP2 ENSGALG00000017365 338 0.939 - - 0.939 - - - - - - - receptor accessory protein 2 [Source:HGNC Symbol;Acc:HGNC:17975]
96. C1orf131 C1orf131 141 0.931 - - 0.931 - - - - - - -
97. NSL1/DC31 NSL1/DC31 43 0.925 - - 0.925 - - - - - - -
98. LOC769139 ENSGALG00000026754 753 0.925 - - 0.925 - - - - - - - feather keratin 1-like, transcript variant X2
99. MTMR10 85 0.924 - - 0.924 - - - - - - - myotubularin related protein 10
100. PLEKHJ1 ENSGALG00000000835 55 0.923 - - 0.923 - - - - - - - pleckstrin homology domain containing J1 [Source:NCBI gene;Acc:428324]

There are 324 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA