Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PSMD3

Gene Name Gene ID Reads Annotation
PSMD3 ENSGALG00000033162 25615 proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]











Genes with expression patterns similar to PSMD3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PSMD3 ENSGALG00000033162 25615 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
2. HARS ENSGALG00000035080 11602 1.806 - - - - 0.964 - 0.842 - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
3. MARC1 ENSGALG00000009453 5675 1.788 - - - - 0.961 - 0.827 - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
4. GSPT1 15580 1.777 - - - - 0.935 - 0.842 - - - G1 to S phase transition 1, transcript variant X1
5. LGALS1 ENSGALG00000012420 13993 1.758 - - - - 0.968 - 0.790 - - - galectin 1 [Source:NCBI gene;Acc:396491]
6. GABARAPL2 ENSGALG00000003208 9195 1.753 - - - - 0.939 - 0.814 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
7. SRGAP1 ENSGALG00000009825 6753 1.746 - - - - 0.957 - 0.789 - - - SLIT-ROBO Rho GTPase activating protein 1 [Source:NCBI gene;Acc:417821]
8. CHMP5 ENSGALG00000013160 13347 1.746 - - - - 0.927 - 0.819 - - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
9. UQCRH ENSGALG00000017380 55734 1.74 - - - - 0.909 - 0.831 - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
10. NUP88 ENSGALG00000032280 9847 1.736 - - - - 0.956 - 0.780 - - - nucleoporin 88 [Source:HGNC Symbol;Acc:HGNC:8067]
11. UPF3B ENSGALG00000008618 12350 1.734 - - - - 0.967 - 0.767 - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
12. LMAN2 ENSGALG00000033232 11740 1.729 - - - - 0.962 - 0.767 - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
13. DLD ENSGALG00000007931 11011 1.708 - - - - 0.960 - 0.748 - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
14. MED21 ENSGALG00000027435 5766 1.704 - - - - 0.974 - 0.730 - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
15. TAF3 ENSGALG00000006731 15569 1.7 - - - - 0.961 - 0.739 - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
16. RAD23B ENSGALG00000015540 10828 1.699 - - - - 0.930 - 0.769 - - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
17. CENPP ENSGALG00000004687 6707 1.693 - - - - 0.934 - 0.759 - - - centromere protein P [Source:NCBI gene;Acc:415952]
18. VMA21 ENSGALG00000009065 6432 1.693 - - - - 0.933 - 0.760 - - - VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]
19. PRCC ENSGALG00000040696 9346 1.686 - - - - 0.955 - 0.731 - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
20. NEK6 ENSGALG00000001118 20333 1.686 - - - - 0.973 - 0.713 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
21. UTP6 ENSGALG00000003260 4909 1.684 - - - - 0.968 - 0.716 - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
22. SLMO2 SLMO2 9207 1.682 - - - - 0.967 - 0.715 - - -
23. CEP78 ENSGALG00000015179 5227 1.679 - - - - 0.943 - 0.736 - - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
24. CDCA7 ENSGALG00000040833 7484 1.674 - - - - 0.957 - 0.717 - - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
25. EIF3B ENSGALG00000040999 49971 1.67 - - - - 0.874 - 0.796 - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
26. LSM5 ENSGALG00000041625 22307 1.649 - - - - 0.836 - 0.813 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
27. DDX27 ENSGALG00000006974 18388 1.635 - - - - 0.822 - 0.813 - - - DEAD-box helicase 27 [Source:NCBI gene;Acc:419308]
28. CSNK2A1 ENSGALG00000006197 41409 1.624 - - - - 0.800 - 0.824 - - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
29. UMPS ENSGALG00000011770 11331 1.623 - - - - 0.897 - 0.726 - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
30. CIAPIN1 ENSGALG00000029268 23036 1.607 - - - - - - 0.855 - - 0.752 cytokine induced apoptosis inhibitor 1 [Source:NCBI gene;Acc:415637]
31. YWHAZ ENSGALG00000031387 84985 1.599 - - - - 0.725 - 0.874 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
32. PTP4A2 ENSGALG00000003265 24826 1.583 - - - - - - 0.853 - - 0.730 protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:HGNC:9635]
33. MCTS1 ENSGALG00000008517 27514 1.555 - - - - 0.704 - 0.851 - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
34. SSU72 ENSGALG00000001489 7589 1.549 - - - - - - 0.834 0.715 - - SSU72 homolog, RNA polymerase II CTD phosphatase [Source:NCBI gene;Acc:419410]
35. ZADH2 ENSGALG00000022882 11790 1.527 - - - - 0.811 - 0.716 - - - zinc binding alcohol dehydrogenase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28697]
36. UQCRC1 ENSGALG00000005789 23201 1.517 - - - - - - 0.785 0.732 - - ubiquinol-cytochrome c reductase core protein 1 [Source:HGNC Symbol;Acc:HGNC:12585]
37. TSG101 ENSGALG00000006312 8289 1.464 - - - - - - 0.760 0.704 - - tumor susceptibility gene 101 [Source:NCBI gene;Acc:423082]
38. MMP15 ENSGALG00000038758 49988 1.448 0.701 0.747 - - - - - - - - matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]
39. CHTOP ENSGALG00000042129 24112 1.438 0.726 0.712 - - - - - - - - chromatin target of PRMT1 [Source:HGNC Symbol;Acc:HGNC:24511]
40. URI1 ENSGALG00000004506 6024 1.428 - - - - - - 0.718 0.710 - - URI1, prefoldin like chaperone [Source:HGNC Symbol;Acc:HGNC:13236]
41. CDKN1B ENSGALG00000022980 4606 0.978 - - - - 0.978 - - - - - cyclin dependent kinase inhibitor 1B [Source:NCBI gene;Acc:374106]
42. MYBL2 ENSGALG00000003503 15875 0.975 - - - - 0.975 - - - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
43. BAHD1 ENSGALG00000033675 1779 0.975 - - - - 0.975 - - - - - bromo adjacent homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29153]
44. LZIC ENSGALG00000002616 9052 0.974 - - - - 0.974 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
45. BRF1 ENSGALG00000011705 3406 0.974 - - - - 0.974 - - - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
46. MED8 ENSGALG00000009993 3095 0.974 - - - - 0.974 - - - - - mediator complex subunit 8 [Source:NCBI gene;Acc:424565]
47. ANKRD9 ENSGALG00000011376 525 0.974 - - - - 0.974 - - - - - ankyrin repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20096]
48. MEF2BNB MEF2BNB 5578 0.974 - - - - 0.974 - - - - -
49. ASAP2 ENSGALG00000016419 1393 0.974 - - - - 0.974 - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
50. MRPL16 ENSGALG00000029419 8033 0.974 - - - - 0.974 - - - - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
51. RAMP3 ENSGALG00000037246 1187 0.973 - - - - 0.973 - - - - - receptor activity modifying protein 3 [Source:NCBI gene;Acc:420786]
52. RBM34 ENSGALG00000029915 5618 0.973 - - - - 0.973 - - - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
53. COQ5 ENSGALG00000007185 5614 0.973 - - - - 0.973 - - - - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
54. SMG7 ENSGALG00000004667 707 0.973 - - - - 0.973 - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
55. PRDM4 ENSGALG00000012619 876 0.973 - - - - 0.973 - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
56. STARD3NL ENSGALG00000033038 4851 0.973 - - - - 0.973 - - - - - STARD3 N-terminal like [Source:HGNC Symbol;Acc:HGNC:19169]
57. SFXN5 ENSGALG00000016094 2678 0.973 - - - - 0.973 - - - - - sideroflexin 5 [Source:HGNC Symbol;Acc:HGNC:16073]
58. PREP2 PREP2 238 0.973 - - - - 0.973 - - - - -
59. TIMMDC1 ENSGALG00000024480 9337 0.973 - - - - 0.973 - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
60. SYNE1 ENSGALG00000013505 2324 0.973 - - - - 0.973 - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
61. NDUFV1 ENSGALG00000042809 6222 0.973 - - - - 0.973 - - - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
62. GTF2H1 ENSGALG00000042340 1553 0.973 - - - - 0.973 - - - - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
63. YARS ENSGALG00000003563 11093 0.972 - - - - 0.972 - - - - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
64. CCDC132 CCDC132 2632 0.972 - - - - 0.972 - - - - -
65. SDCBP ENSGALG00000015436 1228 0.972 - - - - 0.972 - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
66. C9orf85 ENSGALG00000026001 4110 0.972 - - - - 0.972 - - - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
67. SAP30 ENSGALG00000036252 2032 0.972 - - - - 0.972 - - - - - Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]
68. PITHD1 ENSGALG00000003986 11470 0.972 - - - - 0.972 - - - - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
69. ENSGALG00000027854 ENSGALG00000027854 5007 0.972 - - - - 0.972 - - - - -
70. PTK2B ENSGALG00000016564 406 0.972 - - - - 0.972 - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
71. DLL1 ENSGALG00000011182 1613 0.971 - - - - 0.971 - - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
72. HSF2 ENSGALG00000038420 5259 0.971 - - - - 0.971 - - - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
73. RBM6 ENSGALG00000035578 1690 0.971 - - - - 0.971 - - - - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
74. RAD54B ENSGALG00000043597 1699 0.971 - - - - 0.971 - - - - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
75. RHOT1 ENSGALG00000003397 5149 0.971 - - - - 0.971 - - - - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
76. ETS1 ENSGALG00000001143 7284 0.971 - - - - 0.971 - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:NCBI gene;Acc:396235]
77. IARS2 ENSGALG00000009566 4599 0.97 - - - - 0.970 - - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421346]
78. ZC3H6 ENSGALG00000008269 10353 0.97 - - - - 0.970 - - - - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
79. SNX14 ENSGALG00000015831 2554 0.97 - - - - 0.970 - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
80. WDR92 ENSGALG00000008760 3934 0.97 - - - - 0.970 - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
81. PHTF1 ENSGALG00000001845 3276 0.97 - - - - 0.970 - - - - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
82. LOC426385 ENSGALG00000026301 2703 0.969 - - - - 0.969 - - - - - serine/threonine kinase 35-like, transcript variant X2
83. KIF11 ENSGALG00000030597 5528 0.969 - - - - 0.969 - - - - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
84. FUNDC2 ENSGALG00000029585 9334 0.969 - - - - 0.969 - - - - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
85. ENSGALG00000006569 ENSGALG00000006569 2169 0.969 - - - - 0.969 - - - - -
86. PBRM1 ENSGALG00000037455 6450 0.968 - - - - 0.968 - - - - - polybromo 1 [Source:NCBI gene;Acc:396074]
87. TMF1 ENSGALG00000013408 3344 0.968 - - - - 0.968 - - - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
88. FNDC5 ENSGALG00000003567 3328 0.968 - - - - 0.968 - - - - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
89. SPEN ENSGALG00000036932 9688 0.967 - - - - 0.967 - - - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
90. LGMN ENSGALG00000010811 7401 0.967 - - - - 0.967 - - - - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
91. EDNRA ENSGALG00000010013 2472 0.966 - - - - 0.966 - - - - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
92. DGKZ ENSGALG00000008380 5389 0.966 - - - - 0.966 - - - - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
93. PSMG3 ENSGALG00000004203 11240 0.965 - - - - 0.965 - - - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
94. MYO9A ENSGALG00000033618 4505 0.965 - - - - 0.965 - - - - - myosin IXA, transcript variant X10
95. RALGDS ENSGALG00000003412 4478 0.965 - - - - 0.965 - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
96. Mar-05 Mar-05 6330 0.964 - - - - 0.964 - - - - -
97. ACAT2 ENSGALG00000011659 12825 0.963 - - - - 0.963 - - - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
98. HDAC8 ENSGALG00000004825 12066 0.963 - - - - 0.963 - - - - - histone deacetylase 8, transcript variant X2
99. TSPO2 ENSGALG00000003212 5141 0.962 - - - - 0.962 - - - - - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
100. DENR ENSGALG00000003795 30805 0.959 - - - - 0.959 - - - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]

There are 817 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA