Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PSMD13

Gene Name Gene ID Reads Annotation
PSMD13 ENSGALG00000043684 14720 proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]











Genes with expression patterns similar to PSMD13

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PSMD13 ENSGALG00000043684 14720 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
2. GDPD4 ENSGALG00000000690 824 1.814 - - 0.830 - - - 0.984 - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
3. ANLN 10479 1.802 - - - - - - 0.994 0.808 - - anillin actin binding protein, transcript variant X2
4. GSDMA ENSGALG00000013495 1650 1.79 - - 0.806 - - - 0.984 - - - gasdermin A [Source:NCBI gene;Acc:426132]
5. CTNNBL1 ENSGALG00000006817 6765 1.774 - - - - - - 0.985 0.789 - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
6. APITD1 APITD1 11830 1.756 - - - - - - 0.987 0.769 - -
7. LOC424109 ENSGALG00000008738 3932 1.749 - - - - - - 0.989 0.760 - - alpha-aspartyl dipeptidase
8. MRPS34 ENSGALG00000001792 14262 1.731 - - 0.760 - - - 0.971 - - - mitochondrial ribosomal protein S34 [Source:NCBI gene;Acc:426987]
9. GCAT ENSGALG00000012312 7906 1.725 - - - - - - 0.989 0.736 - - glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
10. CCDC90B ENSGALG00000037072 5088 1.705 - - - - - - 0.990 0.715 - - coiled-coil domain containing 90B [Source:HGNC Symbol;Acc:HGNC:28108]
11. USO1 ENSGALG00000010878 9506 1.703 - - - - - 0.715 0.988 - - - USO1 vesicle transport factor [Source:NCBI gene;Acc:422575]
12. CDC5L ENSGALG00000016704 22893 1.682 - - 0.703 - - - 0.979 - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
13. MAEA ENSGALG00000013310 13230 1.645 - - 0.819 - - - - 0.826 - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
14. URM1 ENSGALG00000004971 17880 1.627 - - 0.780 - - - - 0.847 - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
15. CHMP4B ENSGALG00000002095 17422 1.61 - - 0.807 - - - - 0.803 - - charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
16. PRKACB ENSGALG00000028530 12506 1.606 - - 0.759 - - - - 0.847 - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
17. SETD1B ENSGALG00000004324 2897 1.595 - - 0.845 - - - - 0.750 - - SET domain containing 1B [Source:NCBI gene;Acc:416851]
18. RIT1 ENSGALG00000014647 7174 1.592 - - - - - - - 0.830 - 0.762 Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
19. MIB1 ENSGALG00000014974 3583 1.588 - - 0.809 - - - - 0.779 - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
20. ERCC3 ENSGALG00000011515 3133 1.581 - - 0.791 - - - - 0.790 - - ERCC excision repair 3, TFIIH core complex helicase subunit [Source:NCBI gene;Acc:424226]
21. LXR LXR 2599 1.568 - - 0.786 - - - - 0.782 - -
22. C2H6orf52 ENSGALG00000012721 3631 1.566 - - 0.808 - - - - 0.758 - - chromosome 2 C6orf52 homolog [Source:NCBI gene;Acc:420849]
23. TAF2 ENSGALG00000043193 6311 1.559 - - - - - - - 0.845 - 0.714 TATA-box binding protein associated factor 2 [Source:NCBI gene;Acc:428389]
24. TUBGCP3 ENSGALG00000016836 332 1.544 - - 0.814 - - - - - - 0.730 tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
25. DDX42 ENSGALG00000000581 8780 1.544 - - 0.744 - - - - 0.800 - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
26. RFK ENSGALG00000033558 1364 1.541 - - 0.811 - - - - 0.730 - - riboflavin kinase, transcript variant X3
27. RAD54L2 ENSGALG00000003243 187 1.54 - - 0.806 - - - - - - 0.734 RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
28. AKAP10 ENSGALG00000004679 103 1.534 - - 0.817 - - - - - - 0.717 A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
29. UTP6 ENSGALG00000003260 4909 1.533 - - 0.742 - - - - - - 0.791 UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
30. PEMT ENSGALG00000004875 4094 1.53 - - 0.807 - - - - 0.723 - - phosphatidylethanolamine N-methyltransferase [Source:NCBI gene;Acc:416508]
31. PRDX4 ENSGALG00000016357 32208 1.522 - - - - - - 0.801 0.721 - - peroxiredoxin 4 [Source:HGNC Symbol;Acc:HGNC:17169]
32. NUBP1 ENSGALG00000007241 3791 1.514 - - 0.796 - - - - 0.718 - - nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
33. ACTR8 ENSGALG00000005385 3647 1.514 - - 0.714 - - - - 0.800 - - ARP8 actin related protein 8 homolog [Source:HGNC Symbol;Acc:HGNC:14672]
34. GTF2H2 ENSGALG00000002399 2361 1.511 - - 0.809 - - - - 0.702 - - general transcription factor IIH subunit 2, transcript variant X2
35. SLC12A4 ENSGALG00000034179 5674 1.5 - - 0.708 - - - - 0.792 - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
36. ASH2L ENSGALG00000003233 4814 1.5 - - 0.758 - - - - 0.742 - - ASH2 like, histone lysine methyltransferase complex subunit [Source:NCBI gene;Acc:426774]
37. LPCAT3 ENSGALG00000014570 7919 1.497 - - 0.793 - - - - 0.704 - - lysophosphatidylcholine acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:30244]
38. MPP1 ENSGALG00000005071 3865 1.494 - - - - - - - 0.733 - 0.761 membrane palmitoylated protein 1 [Source:NCBI gene;Acc:422197]
39. TXN2 ENSGALG00000012532 12518 1.489 - - 0.780 - - - - 0.709 - - thioredoxin 2 [Source:NCBI gene;Acc:426978]
40. SWIP-1 SWIP-1 6024 1.485 - - - - - - - 0.754 - 0.731
41. SESN1 ENSGALG00000015286 2387 1.483 - - 0.761 - - - - 0.722 - - sestrin 1 [Source:HGNC Symbol;Acc:HGNC:21595]
42. NDC1 ENSGALG00000031606 3094 1.471 - - 0.747 - - - - 0.724 - - NDC1 transmembrane nucleoporin [Source:HGNC Symbol;Acc:HGNC:25525]
43. WDR3 ENSGALG00000014791 5856 1.468 - - 0.711 - - - - 0.757 - - WD repeat domain 3 [Source:NCBI gene;Acc:427952]
44. LBR 6686 1.459 - - 0.718 - - - - 0.741 - - lamin B receptor, transcript variant X4
45. COQ3 ENSGALG00000015486 3508 1.457 - - 0.732 - - - - 0.725 - - coenzyme Q3, methyltransferase [Source:HGNC Symbol;Acc:HGNC:18175]
46. SHMT1 ENSGALG00000005046 1430 1.457 - - 0.741 - - - - 0.716 - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
47. HINT3 ENSGALG00000044342 5674 1.447 - - 0.704 - - - - 0.743 - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
48. LCMT1 ENSGALG00000005973 1300 1.441 - - 0.723 - - - - 0.718 - - leucine carboxyl methyltransferase 1 [Source:NCBI gene;Acc:416565]
49. GATAD1 ENSGALG00000009399 4067 1.439 - - - - - - - 0.727 - 0.712 GATA zinc finger domain containing 1 [Source:NCBI gene;Acc:420551]
50. AP2M1 ENSGALG00000008432 16249 1.433 - - 0.724 - - - - 0.709 - - adaptor related protein complex 2 mu 1 subunit [Source:NCBI gene;Acc:770246]
51. POMP ENSGALG00000017090 5504 1.43 - - 0.713 - - - - 0.717 - - proteasome maturation protein [Source:HGNC Symbol;Acc:HGNC:20330]
52. FBN1 ENSGALG00000004960 2130 1.426 - - 0.703 - - - - 0.723 - - fibrillin 1 [Source:HGNC Symbol;Acc:HGNC:3603]
53. PTRH2 ENSGALG00000005150 4756 1.406 - - 0.702 - - - - 0.704 - - peptidyl-tRNA hydrolase 2 [Source:NCBI gene;Acc:417634]
54. GALNTL4 GALNTL4 3548 0.991 - - - - - - 0.991 - - -
55. ACTR6 ENSGALG00000040976 31271 0.99 - - - - - - 0.990 - - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
56. gga-mir-1723 ENSGALG00000025386 6662 0.99 - - - - - - 0.990 - - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
57. GLT8D1 ENSGALG00000001642 4232 0.99 - - - - - - 0.990 - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
58. ZNF276 ENSGALG00000000513 2410 0.99 - - - - - - 0.990 - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
59. DIS3 ENSGALG00000016930 3696 0.99 - - - - - - 0.990 - - - DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
60. DNAJC10 ENSGALG00000008862 3114 0.989 - - - - - - 0.989 - - - DnaJ heat shock protein family (Hsp40) member C10 [Source:HGNC Symbol;Acc:HGNC:24637]
61. TRIB2 ENSGALG00000016457 17641 0.989 - - - - - - 0.989 - - - tribbles pseudokinase 2 [Source:NCBI gene;Acc:378919]
62. LYVE1 ENSGALG00000005643 1230 0.989 - - - - - - 0.989 - - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:NCBI gene;Acc:423038]
63. CRAC1A CRAC1A 5265 0.989 - - - - - - 0.989 - - -
64. MMADHC ENSGALG00000012473 9026 0.989 - - - - - - 0.989 - - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
65. LOC425795 ENSGALG00000027696 2357 0.989 - - - - - - 0.989 - - - ectoderm-neural cortex protein 1-like, transcript variant X1
66. LUZP2 ENSGALG00000030151 585 0.989 - - - - - - 0.989 - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
67. SAV1 ENSGALG00000012341 3313 0.989 - - - - - - 0.989 - - - salvador family WW domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:17795]
68. TTF1 4214 0.989 - - - - - - 0.989 - - - transcription termination factor 1
69. RPUSD4 ENSGALG00000024326 3788 0.989 - - - - - - 0.989 - - - RNA pseudouridylate synthase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25898]
70. ATPAF2 ENSGALG00000004926 3393 0.989 - - - - - - 0.989 - - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:18802]
71. ENSGALG00000006730 ENSGALG00000006730 3695 0.989 - - - - - - 0.989 - - -
72. C6H10ORF32 C6H10ORF32 7694 0.989 - - - - - - 0.989 - - -
73. CHL1 ENSGALG00000037856 1565 0.989 - - - - - - 0.989 - - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
74. CSDE1 ENSGALG00000002139 1683 0.989 - - - - - - 0.989 - - - cold shock domain containing E1 [Source:NCBI gene;Acc:419886]
75. SNAPIN ENSGALG00000026796 11155 0.989 - - - - - - 0.989 - - - SNAP associated protein [Source:HGNC Symbol;Acc:HGNC:17145]
76. MAPT ENSGALG00000000625 659 0.988 - - - - - - 0.988 - - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
77. LHFPL2 ENSGALG00000004437 500 0.988 - - - - - - 0.988 - - - LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]
78. PRKG1 ENSGALG00000003805 4654 0.988 - - - - - - 0.988 - - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
79. MYBL2 ENSGALG00000003503 15875 0.988 - - - - - - 0.988 - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
80. MED1 ENSGALG00000001708 9556 0.988 - - - - - - 0.988 - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
81. COMMD8 ENSGALG00000026279 13509 0.987 - - - - - - 0.987 - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
82. FHL3 ENSGALG00000035187 9753 0.986 - - - - - - 0.986 - - - four and a half LIM domains 3 [Source:HGNC Symbol;Acc:HGNC:3704]
83. POLR2C ENSGALG00000001168 10703 0.985 - - - - - - 0.985 - - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
84. SERBP1 ENSGALG00000011229 30489 0.985 - - - - - - 0.985 - - - SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]
85. CCAR1 ENSGALG00000004108 13219 0.984 - - - - - - 0.984 - - - cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
86. SH3RF3 ENSGALG00000016810 2169 0.983 - - - - - - 0.983 - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
87. PPP3CB ENSGALG00000005243 8794 0.983 - - - - - - 0.983 - - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
88. EZH2 ENSGALG00000043399 15881 0.981 - - - - - - 0.981 - - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]
89. RNF13 ENSGALG00000010411 8749 0.981 - - - - - - 0.981 - - - ring finger protein 13 [Source:NCBI gene;Acc:396303]
90. NOB1 ENSGALG00000000693 15442 0.98 - - - - - - 0.980 - - - NIN1 (RPN12) binding protein 1 homolog [Source:HGNC Symbol;Acc:HGNC:29540]
91. CNBP 42704 0.98 - - - - - - 0.980 - - - CCHC-type zinc finger nucleic acid binding protein, transcript variant X7
92. SPINT1 ENSGALG00000008469 5735 0.98 - - - - - - 0.980 - - - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
93. FGD5 ENSGALG00000008546 4031 0.979 - - - - - - 0.979 - - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
94. EXOSC7 ENSGALG00000030084 8654 0.979 - - - - - - 0.979 - - - exosome component 7 [Source:NCBI gene;Acc:420704]
95. MRPS15 ENSGALG00000044433 15356 0.979 - - - - - - 0.979 - - - mitochondrial ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:14504]
96. EPHA3 ENSGALG00000015403 9811 0.978 - - - - - - 0.978 - - - EPH receptor A3 [Source:NCBI gene;Acc:396402]
97. ABRACL ENSGALG00000013826 19445 0.978 - - - - - - 0.978 - - - ABRA C-terminal like [Source:NCBI gene;Acc:770205]
98. POLB ENSGALG00000040828 7462 0.976 - - - - - - 0.976 - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
99. TP53INP1 ENSGALG00000041353 6890 0.976 - - - - - - 0.976 - - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
100. MRPS36 ENSGALG00000014789 7584 0.975 - - - - - - 0.975 - - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]

There are 906 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA