Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PSMD1

Gene Name Gene ID Reads Annotation
PSMD1 ENSGALG00000007664 7609 proteasome 26S subunit, non-ATPase 1 [Source:NCBI gene;Acc:424926]











Genes with expression patterns similar to PSMD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PSMD1 ENSGALG00000007664 7609 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 proteasome 26S subunit, non-ATPase 1 [Source:NCBI gene;Acc:424926]
2. RDX ENSGALG00000017153 6734 2.375 0.792 - 0.700 - - - - 0.883 - - radixin [Source:NCBI gene;Acc:395511]
3. ANKRD40L ENSGALG00000026189 887 1.652 - - - - - - 0.746 0.906 - - ankyrin repeat domain-containing protein 40-like, transcript variant X5
4. HDAC4 ENSGALG00000004288 2124 1.642 - - - - - - - 0.939 - 0.703 histone deacetylase 4 [Source:NCBI gene;Acc:374207]
5. TRIM71 ENSGALG00000019622 1633 1.617 0.724 - - - - - - 0.893 - - tripartite motif containing 71 [Source:NCBI gene;Acc:428445]
6. ENSGALG00000004032 ENSGALG00000004032 2010 1.608 - - 0.711 - - - - 0.897 - -
7. AKAP9 ENSGALG00000040724 7446 1.606 0.774 - - - - - - 0.832 - - A-kinase anchoring protein 9 [Source:NCBI gene;Acc:395695]
8. ANKRD11 ENSGALG00000006222 12327 1.568 0.853 0.715 - - - - - - - - ankyrin repeat domain 11, transcript variant X2
9. EIF5B ENSGALG00000016764 30681 1.555 0.810 - 0.745 - - - - - - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
10. SRSF11 ENSGALG00000011305 10435 1.547 0.835 - 0.712 - - - - - - - serine and arginine rich splicing factor 11 [Source:NCBI gene;Acc:424714]
11. PSMA4 ENSGALG00000003046 4870 1.546 0.744 - - - - - - - 0.802 - proteasome subunit alpha 4 [Source:NCBI gene;Acc:415357]
12. GKAP1 ENSGALG00000012586 2908 1.434 0.703 - 0.731 - - - - - - - G kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:17496]
13. CHUK ENSGALG00000003289 5698 0.96 - - - - - - - 0.960 - - conserved helix-loop-helix ubiquitous kinase [Source:NCBI gene;Acc:423669]
14. CECR5L ENSGALG00000005020 116 0.958 - - - - - - - 0.958 - - cat eye syndrome chromosome region, candidate 5-like
15. H4-I H4-I 2327 0.955 - - - - - - - 0.955 - -
16. CENPC1 CENPC1 3324 0.952 - - - - - - - 0.952 - -
17. LIPG ENSGALG00000043734 2490 0.942 - - - - - - - 0.942 - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
18. TOX ENSGALG00000039102 1434 0.939 - - - - - - - 0.939 - - thymocyte selection associated high mobility group box [Source:NCBI gene;Acc:421138]
19. LAMP2 ENSGALG00000008572 198 0.939 - - - - - - - 0.939 - - lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
20. COL6A2 ENSGALG00000039216 892 0.938 - - - - - - - 0.938 - - collagen type VI alpha 2 chain [Source:NCBI gene;Acc:396292]
21. CLUH ENSGALG00000005854 2100 0.938 - - - - - - - 0.938 - - clustered mitochondria homolog [Source:HGNC Symbol;Acc:HGNC:29094]
22. KIAA0930 ENSGALG00000014226 1243 0.937 - - - - - - - 0.937 - - KIAA0930 [Source:HGNC Symbol;Acc:HGNC:1314]
23. DNAJC11 ENSGALG00000000627 769 0.937 - - - - - - - 0.937 - - DnaJ heat shock protein family (Hsp40) member C11 [Source:HGNC Symbol;Acc:HGNC:25570]
24. SLC25A48 ENSGALG00000006341 2606 0.936 - - - - - - - 0.936 - - solute carrier family 25 member 48 [Source:HGNC Symbol;Acc:HGNC:30451]
25. ARAP2 ENSGALG00000041373 233 0.935 - - - - - - - 0.935 - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:16924]
26. LRRC45 ENSGALG00000002877 1751 0.933 - - - - - - - 0.933 - - leucine rich repeat containing 45 [Source:NCBI gene;Acc:770573]
27. TRIM62 ENSGALG00000028437 5124 0.932 - - - - - - - 0.932 - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
28. PYGL ENSGALG00000012365 4691 0.932 - - - - - - - 0.932 - - glycogen phosphorylase L [Source:NCBI gene;Acc:378909]
29. II II 929 0.931 - - - - - - - 0.931 - -
30. ZBTB26 ENSGALG00000042762 1920 0.93 - - - - - - - 0.930 - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]
31. FUBP1 ENSGALG00000008939 2850 0.93 - - - - - - - 0.930 - - far upstream element binding protein 1 [Source:NCBI gene;Acc:424551]
32. HSDL1 ENSGALG00000003273 1108 0.929 - - - - - - - 0.929 - - hydroxysteroid dehydrogenase like 1 [Source:NCBI gene;Acc:415703]
33. PHLPP2 ENSGALG00000000875 561 0.929 - - - - - - - 0.929 - - PH domain and leucine rich repeat protein phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:29149]
34. EDA ENSGALG00000035966 602 0.928 - - - - - - - 0.928 - - ectodysplasin A [Source:HGNC Symbol;Acc:HGNC:3157]
35. EX-FABP EX-FABP 516 0.927 - - - - - - - 0.927 - -
36. LOC422106 ENSGALG00000019757 453 0.927 - - - - - - - 0.927 - - uncharacterized LOC422106
37. SEMA3E ENSGALG00000038225 677 0.927 - - - - - - - 0.927 - - semaphorin 3E [Source:NCBI gene;Acc:374089]
38. GAA ENSGALG00000038853 158 0.926 - - - - - - - 0.926 - - glucosidase alpha, acid [Source:HGNC Symbol;Acc:HGNC:4065]
39. TFG ENSGALG00000015299 849 0.926 - - - - - - - 0.926 - - TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
40. CWH43 ENSGALG00000041921 68 0.926 - - - - - - - 0.926 - - cell wall biogenesis 43 C-terminal homolog [Source:HGNC Symbol;Acc:HGNC:26133]
41. YARS2 503 0.926 - - - - - - - 0.926 - - tyrosyl-tRNA synthetase 2
42. MDM4 ENSGALG00000000636 91 0.925 - - - - - - - 0.925 - - MDM4, p53 regulator [Source:HGNC Symbol;Acc:HGNC:6974]
43. VPS37A ENSGALG00000013646 55 0.925 - - - - - - - 0.925 - - VPS37A, ESCRT-I subunit [Source:HGNC Symbol;Acc:HGNC:24928]
44. TMEM200A ENSGALG00000002282 77 0.925 - - - - - - - 0.925 - - transmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]
45. ENSGALG00000001854 ENSGALG00000001854 965 0.924 - - - - - - - 0.924 - -
46. ORAI1 ENSGALG00000004240 515 0.924 - - - - - - - 0.924 - - ORAI calcium release-activated calcium modulator 1 [Source:NCBI gene;Acc:416845]
47. C4BPA ENSGALG00000001175 4278 0.924 - - - - - - - 0.924 - - complement component 4 binding protein, alpha [Source:NCBI gene;Acc:395384]
48. TRMT61B ENSGALG00000008979 615 0.924 - - - - - - - 0.924 - - tRNA methyltransferase 61B [Source:HGNC Symbol;Acc:HGNC:26070]
49. PINK1 ENSGALG00000037593 3794 0.923 - - - - - - - 0.923 - - PTEN induced putative kinase 1 [Source:HGNC Symbol;Acc:HGNC:14581]
50. SLC30A2 ENSGALG00000010375 44 0.922 - - - - - - - 0.922 - - solute carrier family 30 member 2 [Source:HGNC Symbol;Acc:HGNC:11013]
51. ENSGALG00000006569 ENSGALG00000006569 2169 0.922 - - - - - - - 0.922 - -
52. YARS ENSGALG00000003563 11093 0.922 - - - - - - - 0.922 - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
53. TES ENSGALG00000031934 5908 0.922 - - - - - - - 0.922 - - testin LIM domain protein [Source:NCBI gene;Acc:395332]
54. SENP5 ENSGALG00000008545 909 0.921 - - - - - - - 0.921 - - SUMO specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:28407]
55. DSG2 ENSGALG00000015142 67 0.919 - - - - - - - 0.919 - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
56. GADD45 GADD45 8780 0.919 - - - - - - - 0.919 - -
57. PAMR1 ENSGALG00000007886 928 0.917 - - - - - - - 0.917 - - peptidase domain containing associated with muscle regeneration 1 [Source:HGNC Symbol;Acc:HGNC:24554]
58. B3GNT7 ENSGALG00000007701 929 0.917 - - - - - - - 0.917 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
59. HSPA13 ENSGALG00000019201 712 0.916 - - - - - - - 0.916 - - heat shock protein family A (Hsp70) member 13 [Source:NCBI gene;Acc:418469]
60. ENSGALG00000016572 ENSGALG00000016572 79 0.916 - - - - - - - 0.916 - -
61. SALL1 ENSGALG00000039238 3740 0.916 - - - - - - - 0.916 - - spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
62. GALK2 ENSGALG00000036201 1016 0.916 - - - - - - - 0.916 - - galactokinase 2 [Source:NCBI gene;Acc:415596]
63. E2F4 ENSGALG00000001722 2916 0.916 - - - - - - - 0.916 - - E2F transcription factor 4 [Source:NCBI gene;Acc:769430]
64. RASGEF1A ENSGALG00000002525 918 0.915 - - - - - - - 0.915 - - RasGEF domain family member 1A [Source:HGNC Symbol;Acc:HGNC:24246]
65. ANXA6 ENSGALG00000004357 2891 0.914 - - - - - - - 0.914 - - annexin A6 [Source:NCBI gene;Acc:395481]
66. SOX5 ENSGALG00000032768 998 0.913 - - - - - - - 0.913 - - SRY-box 5 [Source:NCBI gene;Acc:418195]
67. CCDC51 ENSGALG00000006465 1845 0.913 - - - - - - - 0.913 - - coiled-coil domain containing 51, transcript variant X1
68. GPX7 ENSGALG00000010633 7224 0.912 - - - - - - - 0.912 - - glutathione peroxidase 7 [Source:NCBI gene;Acc:424643]
69. SLC41A1 ENSGALG00000000721 1604 0.912 - - - - - - - 0.912 - - solute carrier family 41 member 1 [Source:HGNC Symbol;Acc:HGNC:19429]
70. UBA7 ENSGALG00000036263 2918 0.911 - - - - - - - 0.911 - - ubiquitin-like modifier activating enzyme 7
71. ABCB10 ENSGALG00000011096 1407 0.91 - - - - - - - 0.910 - - ATP binding cassette subfamily B member 10 [Source:HGNC Symbol;Acc:HGNC:41]
72. AMER1 ENSGALG00000007599 994 0.91 - - - - - - - 0.910 - - APC membrane recruitment protein 1 [Source:HGNC Symbol;Acc:HGNC:26837]
73. PRPSAP1 ENSGALG00000021539 3517 0.91 - - - - - - - 0.910 - - phosphoribosyl pyrophosphate synthetase associated protein 1 [Source:HGNC Symbol;Acc:HGNC:9466]
74. CASP7 ENSGALG00000008933 506 0.91 - - - - - - - 0.910 - - caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
75. TM2D3 ENSGALG00000026271 2566 0.908 - - - - - - - 0.908 - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
76. TRAM2 ENSGALG00000016673 438 0.906 - - - - - - - 0.906 - - translocation associated membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:16855]
77. LDHA ENSGALG00000006300 4796 0.905 - - - - - - - 0.905 - - lactate dehydrogenase A [Source:NCBI gene;Acc:396221]
78. CHKA ENSGALG00000036754 5077 0.904 - - - - - - - 0.904 - - choline kinase alpha [Source:HGNC Symbol;Acc:HGNC:1937]
79. ECI2 ENSGALG00000012809 3692 0.903 - - - - - - - 0.903 - - enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
80. MRC1 ENSGALG00000008629 259 0.903 - - - - - - - 0.903 - - Gallus gallus mannose receptor C-type 1 (MRC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001319007]
81. NIT1 ENSGALG00000007585 1256 0.903 - - - - - - - 0.903 - - nitrilase 1 [Source:HGNC Symbol;Acc:HGNC:7828]
82. RIN3 ENSGALG00000010806 729 0.901 - - - - - - - 0.901 - - Ras and Rab interactor 3 [Source:HGNC Symbol;Acc:HGNC:18751]
83. NXT2 ENSGALG00000008092 2477 0.901 - - - - - - - 0.901 - - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
84. SEC11C ENSGALG00000031663 4266 0.901 - - - - - - - 0.901 - - SEC11 homolog C, signal peptidase complex subunit [Source:HGNC Symbol;Acc:HGNC:23400]
85. STK17B ENSGALG00000007924 519 0.9 - - - - - - - 0.900 - - serine/threonine kinase 17b [Source:NCBI gene;Acc:424049]
86. TCEANC ENSGALG00000016581 948 0.9 - - - - - - - 0.900 - - transcription elongation factor A N-terminal and central domain containing [Source:HGNC Symbol;Acc:HGNC:28277]
87. CHALK5 CHALK5 1351 0.896 - - - - - - - 0.896 - -
88. ENSGALG00000014441 ENSGALG00000014441 1442 0.895 - - - - - - - 0.895 - -
89. TCP11L2 ENSGALG00000012658 1671 0.894 - - - - - - - 0.894 - - t-complex 11 like 2 [Source:NCBI gene;Acc:425052]
90. NRG4 ENSGALG00000002952 1440 0.89 - - - - - - - 0.890 - - neuregulin 4 [Source:NCBI gene;Acc:415354]
91. MAPKKK3L ENSGALG00000005884 1011 0.89 - - - - - - - 0.890 - - mitogen-activated protein kinase kinase kinase 3-like [Source:NCBI gene;Acc:420419]
92. ISCA2 ENSGALG00000020417 1130 0.889 - - - - - - - 0.889 - - iron-sulfur cluster assembly 2 [Source:HGNC Symbol;Acc:HGNC:19857]
93. LRRC16A LRRC16A 2041 0.885 - - - - - - - 0.885 - -
94. ANKRA2 ENSGALG00000013511 3460 0.881 - - - - - - - 0.881 - - ankyrin repeat family A member 2 [Source:NCBI gene;Acc:426153]
95. THOC2 ENSGALG00000008507 9501 0.88 0.880 - - - - - - - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
96. TUSC3 ENSGALG00000013674 2848 0.879 - - - - - - - 0.879 - - tumor suppressor candidate 3 [Source:HGNC Symbol;Acc:HGNC:30242]
97. POLA1 ENSGALG00000016312 9440 0.878 - - - - - - - 0.878 - - DNA polymerase alpha 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9173]
98. GJB6 ENSGALG00000017136 500 0.875 - - - - - - - 0.875 - - gap junction protein beta 6 [Source:NCBI gene;Acc:395771]
99. DBR1 ENSGALG00000043797 1896 0.874 - - - - - - - 0.874 - - debranching RNA lariats 1 [Source:NCBI gene;Acc:429118]
100. LPIN1 ENSGALG00000016456 1044 0.873 - - - - - - - 0.873 - - lipin 1 [Source:HGNC Symbol;Acc:HGNC:13345]

There are 219 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA