Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PSMC3

Gene Name Gene ID Reads Annotation
PSMC3 ENSGALG00000008108 22922 proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]











Genes with expression patterns similar to PSMC3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PSMC3 ENSGALG00000008108 22922 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
2. POLE3 ENSGALG00000008873 9161 1.776 - - - - - - 0.864 0.912 - - DNA polymerase epsilon 3, accessory subunit [Source:NCBI gene;Acc:417275]
3. ANKRD10 ENSGALG00000030125 3611 1.744 - - - - - - 0.792 0.952 - - ankyrin repeat domain 10 [Source:NCBI gene;Acc:418760]
4. AP1B1 ENSGALG00000042213 4828 1.728 - - - - - - 0.781 0.947 - - adaptor related protein complex 1 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:554]
5. BMS1 ENSGALG00000002624 8339 1.707 - - - - - - 0.807 0.900 - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
6. ERBB2IP ERBB2IP 5800 1.687 - - - - - - 0.785 0.902 - -
7. NHP2L1 NHP2L1 12124 1.677 - - - - - - 0.704 0.973 - -
8. SGCB ENSGALG00000013968 3214 1.671 - - - - - - 0.771 0.900 - - sarcoglycan beta [Source:NCBI gene;Acc:422760]
9. GTF2H3 ENSGALG00000023682 9914 1.667 - - - - - - 0.766 0.901 - - general transcription factor IIH subunit 3 [Source:NCBI gene;Acc:771837]
10. RAD23B ENSGALG00000015540 10828 1.657 - - - - - - 0.748 0.909 - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
11. ACTR2 ENSGALG00000008779 17812 1.649 - - - - - - 0.831 0.818 - - ARP2 actin related protein 2 homolog [Source:NCBI gene;Acc:396147]
12. MON2 ENSGALG00000009795 3868 1.648 - - - - - - 0.746 0.902 - - MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:NCBI gene;Acc:417818]
13. SUPV3L1 ENSGALG00000004197 4141 1.64 - - - - - - 0.731 0.909 - - Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
14. ENSGALG00000002903 ENSGALG00000002903 18304 1.634 - - - - - - 0.857 0.777 - -
15. NDUFV2 ENSGALG00000036625 29234 1.634 - - 0.776 - - - 0.858 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
16. SETD9 ENSGALG00000014719 5081 1.624 - - - - - - 0.731 0.893 - - SET domain containing 9, transcript variant X2
17. BRP44 BRP44 17093 1.618 - - - - - - 0.829 0.789 - -
18. PSPC1 ENSGALG00000017142 13036 1.618 - - - - - - 0.804 0.814 - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
19. NOC4L ENSGALG00000002272 9644 1.612 - - 0.752 - - - 0.860 - - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
20. PPIH ENSGALG00000004874 25558 1.544 - - - - - - 0.761 0.783 - - peptidylprolyl isomerase H [Source:NCBI gene;Acc:419507]
21. Sep-05 Sep-05 5887 1.543 - - - - - - 0.758 0.785 - -
22. MAN2A1 ENSGALG00000000255 4543 1.535 - - - - - - 0.801 0.734 - - mannosidase alpha class 2A member 1 [Source:HGNC Symbol;Acc:HGNC:6824]
23. ERGIC2 ENSGALG00000007183 12870 1.523 - - 0.744 - - - 0.779 - - - ERGIC and golgi 2 [Source:NCBI gene;Acc:417697]
24. ENSGALG00000006463 ENSGALG00000006463 45151 1.496 - - - - - - 0.773 0.723 - -
25. UQCRC2 ENSGALG00000002490 23477 1.493 - - - - - - 0.731 0.762 - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
26. DDX18 ENSGALG00000012147 12463 0.969 - - - - - - - 0.969 - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
27. SNX9 ENSGALG00000013710 5295 0.951 - - - - - - - 0.951 - - sorting nexin 9 [Source:HGNC Symbol;Acc:HGNC:14973]
28. MBNL3 ENSGALG00000032045 10980 0.949 - - - - - - - 0.949 - - muscleblind like splicing regulator 3 [Source:NCBI gene;Acc:422233]
29. MAP3K7 ENSGALG00000015596 15164 0.924 - - - - - - 0.924 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
30. HERC2 ENSGALG00000016739 9900 0.918 - - - - - - 0.918 - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
31. MRPS11 ENSGALG00000006777 16009 0.917 - - - - - - - 0.917 - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
32. RUVBL1 ENSGALG00000005931 9379 0.91 - - - - - - 0.910 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
33. GPR27 ENSGALG00000027091 8111 0.908 - - - - - - - 0.908 - - G protein-coupled receptor 27
34. WDHD1 ENSGALG00000012199 3570 0.907 - - - - - - - 0.907 - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
35. MRPS35 ENSGALG00000036730 6327 0.905 - - - - - - - 0.905 - - mitochondrial ribosomal protein S35 [Source:NCBI gene;Acc:419048]
36. CTNNA1 ENSGALG00000002447 22379 0.904 - - - - - - - 0.904 - - catenin alpha 1 [Source:HGNC Symbol;Acc:HGNC:2509]
37. NAP1L1 ENSGALG00000010238 14506 0.904 - - - - - - - 0.904 - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
38. VBP1 VBP1 14482 0.903 - - - - - - 0.903 - - -
39. IST1 ENSGALG00000000811 10527 0.903 - - - - - - - 0.903 - - IST1, ESCRT-III associated factor [Source:HGNC Symbol;Acc:HGNC:28977]
40. NEK6 ENSGALG00000001118 20333 0.902 - - - - - - 0.902 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
41. FRAS1 ENSGALG00000010316 5008 0.902 - - - - - - - 0.902 - - Fraser extracellular matrix complex subunit 1, transcript variant X2
42. SERPINE2 ENSGALG00000005135 16108 0.901 - - - - - - - 0.901 - - serpin family E member 2 [Source:NCBI gene;Acc:424805]
43. COPS2 ENSGALG00000000404 8980 0.9 - - - - - - - 0.900 - - COP9 signalosome subunit 2 [Source:NCBI gene;Acc:430917]
44. ANKRD46 ENSGALG00000041445 3791 0.9 - - - - - - - 0.900 - - ankyrin repeat domain 46, transcript variant X1
45. NUPL1 NUPL1 8197 0.899 - - - - - - 0.899 - - -
46. AMACR ENSGALG00000003326 2657 0.899 - - - - - - - 0.899 - - alpha-methylacyl-CoA racemase [Source:NCBI gene;Acc:427429]
47. EDNRA ENSGALG00000010013 2472 0.899 - - - - - - - 0.899 - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
48. CASK ENSGALG00000042400 8485 0.899 - - - - - - 0.899 - - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
49. MRE11A MRE11A 5754 0.899 - - - - - - - 0.899 - -
50. GTF2A1 ENSGALG00000010576 4570 0.899 - - - - - - - 0.899 - - general transcription factor IIA subunit 1 [Source:NCBI gene;Acc:423389]
51. STX8 ENSGALG00000001238 7403 0.899 - - - - - - - 0.899 - - syntaxin 8 [Source:NCBI gene;Acc:417321]
52. SF3B3 ENSGALG00000002531 19397 0.898 - - - - - - 0.898 - - - splicing factor 3b subunit 3, transcript variant X2
53. XRN2 ENSGALG00000008372 22164 0.898 - - - - - - 0.898 - - - 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]
54. TAPA1 TAPA1 8669 0.898 - - - - - - - 0.898 - -
55. PTTG1IP ENSGALG00000005675, ENSGALG00000009044 10949 0.898 - - - - - - - 0.898 - - pituitary tumor-transforming 1 interacting protein, transcript variant X1
56. CTCF 10811 0.897 - - - - - - 0.897 - - - CCCTC-binding factor, transcript variant X2
57. AKAP2 ENSGALG00000015656 4310 0.897 - - - - - - - 0.897 - - A kinase (PRKA) anchor protein 2 [Source:NCBI gene;Acc:100533110]
58. GNG2 ENSGALG00000027629 9404 0.897 - - - - - - - 0.897 - - G protein subunit gamma 2 [Source:NCBI gene;Acc:423581]
59. NCAPG2 ENSGALG00000006525 2319 0.897 - - - - - - - 0.897 - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
60. BYSL ENSGALG00000003467 7555 0.896 - - - - - - - 0.896 - - bystin like [Source:HGNC Symbol;Acc:HGNC:1157]
61. ILF2 ENSGALG00000011570 23050 0.896 - - - - - - 0.896 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
62. MND1 ENSGALG00000009212 11765 0.894 - - - - - - - 0.894 - - meiotic nuclear divisions 1 [Source:NCBI gene;Acc:422399]
63. VPRBP VPRBP 4037 0.894 - - - - - - - 0.894 - -
64. RPAIN ENSGALG00000001666 2676 0.893 - - - - - - - 0.893 - - RPA interacting protein [Source:HGNC Symbol;Acc:HGNC:28641]
65. CENPJ ENSGALG00000017148 1415 0.893 - - - - - - - 0.893 - - centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
66. TUBD1 ENSGALG00000005173 1364 0.892 - - - - - - - 0.892 - - tubulin delta 1 [Source:HGNC Symbol;Acc:HGNC:16811]
67. REPS2 ENSGALG00000016545 3347 0.892 - - - - - - - 0.892 - - RALBP1 associated Eps domain containing 2 [Source:NCBI gene;Acc:418617]
68. AMD1 ENSGALG00000039575 8900 0.891 - - - - - - - 0.891 - - adenosylmethionine decarboxylase 1 [Source:NCBI gene;Acc:421755]
69. EVX1 ENSGALG00000037310 1974 0.89 - - - - - - - 0.890 - - even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]
70. CNTRL ENSGALG00000001513 1773 0.89 - - - - - - - 0.890 - - centriolin [Source:NCBI gene;Acc:417121]
71. ACTA1 ENSGALG00000011086 2543 0.889 - - - - - - - 0.889 - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
72. LIMCH1 ENSGALG00000014258 1987 0.889 - - - - - - - 0.889 - - LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]
73. NQO2 ENSGALG00000025747 2287 0.887 - - - - - - - 0.887 - - N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
74. ZNF318 ENSGALG00000034040 1758 0.887 - - - - - - - 0.887 - - zinc finger protein 318 [Source:HGNC Symbol;Acc:HGNC:13578]
75. RFC5 ENSGALG00000026517 26113 0.886 - - - - - - 0.886 - - - replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]
76. TLCD2 ENSGALG00000021592 1166 0.886 - - - - - - - 0.886 - - TLC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:33522]
77. QSOX2 ENSGALG00000001758 638 0.886 - - - - - - - 0.886 - - quiescin sulfhydryl oxidase 2 [Source:HGNC Symbol;Acc:HGNC:30249]
78. TXNDC17 ENSGALG00000027950 45004 0.886 - - - - - - 0.886 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
79. RNF19B ENSGALG00000039716 662 0.886 - - - - - - - 0.886 - - ring finger protein 19B [Source:HGNC Symbol;Acc:HGNC:26886]
80. LAMA5 486 0.885 - - - - - - - 0.885 - - laminin subunit alpha 5, transcript variant X3
81. LSM5 ENSGALG00000041625 22307 0.884 - - - - - - 0.884 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
82. HSPA4 ENSGALG00000040882 20966 0.884 - - - - - - 0.884 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
83. MZT1 ENSGALG00000016932 9269 0.883 - - - - - - 0.883 - - - mitotic spindle organizing protein 1 [Source:NCBI gene;Acc:418822]
84. PPP1R2 ENSGALG00000029789 11594 0.881 - - - - - - 0.881 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
85. YWHAZ ENSGALG00000031387 84985 0.881 - - - - - - 0.881 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
86. WDR43 ENSGALG00000032529 12235 0.881 - - - - - - 0.881 - - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
87. UBE2D1 ENSGALG00000021213 5876 0.881 - - - - - - 0.881 - - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
88. CZH9ORF80 CZH9ORF80 12760 0.881 - - - - - - 0.881 - - -
89. RBBP4 ENSGALG00000003522 72455 0.88 - - - - - - 0.880 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
90. GLRX3 ENSGALG00000010464 22578 0.879 - - - - - - 0.879 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
91. RBP5 ENSGALG00000014662 31268 0.879 - - - - - - 0.879 - - - retinol binding protein 5 [Source:NCBI gene;Acc:418296]
92. SOS1 ENSGALG00000039450 3941 0.878 - - - - - - - 0.878 - - SOS Ras/Rac guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:11187]
93. SLC25A13 ENSGALG00000009728 8858 0.875 - - - - - - 0.875 - - - solute carrier family 25 member 13 [Source:NCBI gene;Acc:428427]
94. ACSF2 ENSGALG00000019768 2727 0.875 - - - - - - - 0.875 - - acyl-CoA synthetase family member 2 [Source:HGNC Symbol;Acc:HGNC:26101]
95. TPRKB ENSGALG00000013018 8687 0.871 - - - - - - 0.871 - - - TP53RK binding protein [Source:HGNC Symbol;Acc:HGNC:24259]
96. PES1 ENSGALG00000007778 12248 0.87 - - - - - - 0.870 - - - pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8848]
97. SPEN ENSGALG00000036932 9688 0.869 - - - - - - 0.869 - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
98. PTK2 ENSGALG00000031741 13103 0.869 - - - - - - 0.869 - - - protein tyrosine kinase 2 [Source:NCBI gene;Acc:396416]
99. AN1ZNF5L ENSGALG00000014589 21148 0.866 - - - - - - 0.866 - - - AN1-type zinc finger protein 5-like, transcript variant X2
100. CDC45 ENSGALG00000001616 8432 0.865 - - - - - - 0.865 - - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]

There are 862 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA