Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PSMC2

Gene Name Gene ID Reads Annotation
PSMC2 ENSGALG00000008236 25980 proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]











Genes with expression patterns similar to PSMC2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PSMC2 ENSGALG00000008236 25980 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
2. NARS ENSGALG00000040506 9506 2.472 - - - - - - 0.857 0.722 - 0.893 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
3. EAPP ENSGALG00000010007 5080 2.373 - - - - 0.925 - - 0.717 - 0.731 E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
4. NAA25 ENSGALG00000041821 12729 1.834 - - - - 0.917 - 0.917 - - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:NCBI gene;Acc:416883]
5. SSR2 ENSGALG00000000764 32190 1.801 - - - - 0.933 - - - - 0.868 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
6. SIRT1 ENSGALG00000002761 9028 1.777 - - - - 0.924 - 0.853 - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
7. LY6E ENSGALG00000041621 16227 1.773 - - - - 0.921 - - - - 0.852 lymphocyte antigen 6 family member E [Source:NCBI gene;Acc:395550]
8. LARP1 ENSGALG00000040109 14808 1.771 - - - - 0.914 - 0.857 - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
9. TMEM165 ENSGALG00000027886 5468 1.735 - - - - 0.921 - - - - 0.814 transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
10. TCP1 ENSGALG00000011637 73216 1.726 - - - - 0.810 - 0.916 - - - t-complex 1 [Source:NCBI gene;Acc:421586]
11. COPS4 ENSGALG00000011130 21515 1.726 - - - - 0.835 - 0.891 - - - COP9 signalosome subunit 4 [Source:NCBI gene;Acc:422594]
12. PNRC2 ENSGALG00000004122 19228 1.723 - - - - 0.930 - - - - 0.793 proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
13. STX2 ENSGALG00000002536 10438 1.713 - - - - - - 0.854 - - 0.859 syntaxin 2 [Source:NCBI gene;Acc:378895]
14. MRPS25 ENSGALG00000008506 12131 1.693 - - - - 0.934 - - 0.759 - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
15. LATS2 4776 1.689 - - - - 0.924 - 0.765 - - - large tumor suppressor kinase 2
16. NAP1L1 ENSGALG00000010238 14506 1.682 - - - - 0.927 - - - - 0.755 nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
17. PSPC1 ENSGALG00000017142 13036 1.674 - - - - 0.934 - - - - 0.740 paraspeckle component 1 [Source:NCBI gene;Acc:418955]
18. SF3A3 ENSGALG00000001540 9664 1.671 - - - - - - 0.835 - - 0.836 splicing factor 3a subunit 3 [Source:HGNC Symbol;Acc:HGNC:10767]
19. ACO2 ENSGALG00000011950 30387 1.658 - - - - - - 0.813 - - 0.845 aconitase 2 [Source:NCBI gene;Acc:374009]
20. QDPR ENSGALG00000030070 6953 1.652 - - - - - - - 0.749 - 0.903 quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
21. TMLHE ENSGALG00000007443 3619 1.645 - - - - - - - 0.774 - 0.871 trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
22. FAM96B 14435 1.63 - - - - - - 0.892 0.738 - - family with sequence similarity 96 member B
23. C20H20ORF24 ENSGALG00000001054 22026 1.621 - - - - 0.921 - - 0.700 - - chromosome 20 open reading frame, human C20orf24 [Source:NCBI gene;Acc:768550]
24. INTS10 ENSGALG00000010130 6320 1.619 - - - - - - 0.735 - - 0.884 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
25. ADD3 ENSGALG00000008542 13814 1.618 - - - - 0.918 - - - - 0.700 adducin 3 (gamma) [Source:NCBI gene;Acc:373892]
26. DNA2 ENSGALG00000004037 5426 1.618 - - - - - - 0.800 - - 0.818 DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
27. SLC35B1 ENSGALG00000035057 10683 1.613 - - - - - - - 0.758 - 0.855 solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
28. BZW2 ENSGALG00000010809 29213 1.602 - - - - - - - 0.771 - 0.831 basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
29. ZFR ENSGALG00000003235 8466 1.6 - - - - - - - 0.737 - 0.863 zinc finger RNA binding protein, transcript variant X3
30. LACTB2 ENSGALG00000038745 3460 1.597 - - - - - - 0.767 - - 0.830 lactamase beta 2 [Source:NCBI gene;Acc:420178]
31. CRCP ENSGALG00000002587 8809 1.593 - - - - - - - 0.737 - 0.856 CGRP receptor component [Source:NCBI gene;Acc:396022]
32. PPIB ENSGALG00000002210 46778 1.58 - - - - - - 0.826 - - 0.754 peptidylprolyl isomerase B (cyclophilin B) [Source:NCBI gene;Acc:396447]
33. BTAF1 ENSGALG00000030598 3556 1.57 - - - - - - 0.820 0.750 - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
34. CCND1 ENSGALG00000007555 6715 1.567 - - - - - - 0.787 - - 0.780 cyclin D1 [Source:NCBI gene;Acc:396341]
35. ALDH7A1 ENSGALG00000008229 5891 1.543 - - - - - - - 0.704 - 0.839 aldehyde dehydrogenase 7 family member A1 [Source:HGNC Symbol;Acc:HGNC:877]
36. SDF4 ENSGALG00000001872 6382 1.543 - - - - - - 0.829 - - 0.714 stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
37. ATP5C1 53961 1.533 - - - - - - 0.761 - - 0.772 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant X1
38. AP3S1 ENSGALG00000002341 12388 1.53 - - - - - - 0.795 - - 0.735 adaptor related protein complex 3 sigma 1 subunit [Source:NCBI gene;Acc:427389]
39. RAB20 ENSGALG00000016844 3250 1.527 - - - - - - 0.769 - - 0.758 RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
40. GTF2E1 ENSGALG00000042320 7712 1.499 - - - - - - 0.789 - - 0.710 general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
41. ADIPOR2 ENSGALG00000035533 6523 1.499 - - - - - - - 0.757 - 0.742 adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
42. PTCH1 ENSGALG00000012620 4840 1.494 - - - - - - - 0.705 - 0.789 patched 1 [Source:NCBI gene;Acc:395806]
43. BTG1 ENSGALG00000011276 17496 1.49 - - - - 0.719 - - 0.771 - - BTG anti-proliferation factor 1 [Source:NCBI gene;Acc:396295]
44. gga-mir-7476 gga-mir-7476 20209 1.479 - - - - - - - 0.736 - 0.743
45. MYST2 MYST2 8078 1.471 - - - - - - 0.758 0.713 - -
46. M6PR ENSGALG00000031681 9442 1.466 - - - - - - - 0.745 - 0.721 mannose-6-phosphate receptor, cation dependent, transcript variant X3
47. USP10 ENSGALG00000005674 7768 1.448 - - - - 0.705 - - - - 0.743 ubiquitin specific peptidase 10 [Source:NCBI gene;Acc:415817]
48. OLA1 ENSGALG00000009325 26414 0.949 - - - - 0.949 - - - - - Obg like ATPase 1 [Source:NCBI gene;Acc:424144]
49. CCT4 ENSGALG00000008812 78267 0.948 - - - - 0.948 - - - - - chaperonin containing TCP1 subunit 4 [Source:NCBI gene;Acc:395414]
50. PTBP1 ENSGALG00000001962 66983 0.948 - - - - - - 0.948 - - - polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:420098]
51. KPNA3 ENSGALG00000017009 17330 0.945 - - - - 0.945 - - - - - karyopherin subunit alpha 3 [Source:NCBI gene;Acc:418870]
52. RPL24 ENSGALG00000015339 227460 0.945 - - - - 0.945 - - - - - ribosomal protein L24 [Source:NCBI gene;Acc:418401]
53. TBCA ENSGALG00000004353 18510 0.942 - - - - 0.942 - - - - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
54. IGDCC4 ENSGALG00000007410 5457 0.941 - - - - 0.941 - - - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
55. MGST1 ENSGALG00000013098 17632 0.941 - - - - - - 0.941 - - - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
56. MKI67 ENSGALG00000025996 28136 0.941 - - - - 0.941 - - - - - marker of proliferation Ki-67, transcript variant X3
57. STRAP ENSGALG00000013092 13100 0.939 - - - - 0.939 - - - - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
58. CSNK1G1 ENSGALG00000030812 31618 0.938 - - - - 0.938 - - - - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
59. NOP58 ENSGALG00000008454 34630 0.937 - - - - 0.937 - - - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
60. MRPL19 ENSGALG00000016731 22670 0.936 - - - - - - 0.936 - - - mitochondrial ribosomal protein L19, transcript variant X1
61. SAR1B ENSGALG00000038753 6493 0.934 - - - - 0.934 - - - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
62. ENSGALG00000014852 ENSGALG00000014852 15288 0.934 - - - - 0.934 - - - - -
63. FH ENSGALG00000013165 13669 0.934 - - - - 0.934 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
64. GBAS 18453 0.933 - - - - 0.933 - - - - - glioblastoma amplified sequence
65. SFSWAP ENSGALG00000002487 9977 0.933 - - - - 0.933 - - - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
66. FBXO9 ENSGALG00000016320 9600 0.933 - - - - 0.933 - - - - - F-box protein 9 [Source:NCBI gene;Acc:421895]
67. MRPL23 ENSGALG00000006561 13737 0.932 - - - - 0.932 - - - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
68. ENSGALG00000007509 ENSGALG00000007509 18441 0.932 - - - - - - 0.932 - - -
69. ATG5 ENSGALG00000015387 7752 0.931 - - - - 0.931 - - - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
70. STK3 ENSGALG00000032850 6339 0.929 - - - - 0.929 - - - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
71. BAG4 ENSGALG00000003254 5751 0.929 - - - - 0.929 - - - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
72. MINOS1 ENSGALG00000004039 37740 0.929 - - - - - - 0.929 - - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
73. COMMD8 ENSGALG00000026279 13509 0.929 - - - - 0.929 - - - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
74. COIL ENSGALG00000003158 7806 0.929 - - - - 0.929 - - - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
75. REEP5 ENSGALG00000023157 6282 0.929 - - - - 0.929 - - - - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
76. TRAPPC12 ENSGALG00000016387 2593 0.929 - - - - 0.929 - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
77. IGBP1 ENSGALG00000044628 9200 0.928 - - - - 0.928 - - - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
78. CZH9ORF41 CZH9ORF41 3492 0.928 - - - - 0.928 - - - - -
79. PUM1 ENSGALG00000042598 9392 0.928 - - - - 0.928 - - - - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
80. SKP2 ENSGALG00000003547 14637 0.927 - - - - 0.927 - - - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
81. MAGOH 28688 0.927 - - - - - - 0.927 - - - mago homolog, exon junction complex core component
82. PCBP4 ENSGALG00000027695 7937 0.927 - - - - 0.927 - - - - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
83. CBWD1 ENSGALG00000010147 2765 0.925 - - - - 0.925 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
84. ELL2 ENSGALG00000014678 1111 0.924 - - - - 0.924 - - - - - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
85. DNAJC12 ENSGALG00000002769 1418 0.924 - - - - 0.924 - - - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
86. PLAA ENSGALG00000001782 5459 0.924 - - - - 0.924 - - - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
87. WDR82 ENSGALG00000025904 4783 0.924 - - - - 0.924 - - - - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
88. TLK2 ENSGALG00000000410 4690 0.924 - - - - 0.924 - - - - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
89. KNOP1 ENSGALG00000002042 6251 0.923 - - - - 0.923 - - - - - lysine-rich nucleolar protein 1, transcript variant X1
90. ACAA2 ENSGALG00000031142 29220 0.923 - - - - - - 0.923 - - - acetyl-CoA acyltransferase 2 [Source:NCBI gene;Acc:426847]
91. POLR2B ENSGALG00000011387 4864 0.922 - - - - 0.922 - - - - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
92. MRPS27 ENSGALG00000015002 6541 0.922 - - - - 0.922 - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
93. TLCD1 ENSGALG00000003973 17569 0.922 - - - - 0.922 - - - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
94. SH2D3C ENSGALG00000005036 5101 0.922 - - - - 0.922 - - - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
95. ZBTB10 ENSGALG00000034376 3271 0.921 - - - - 0.921 - - - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
96. AATF ENSGALG00000005420 6501 0.921 - - - - 0.921 - - - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
97. NDUFA8 ENSGALG00000040987 49453 0.921 - - - - 0.921 - - - - - NADH:ubiquinone oxidoreductase subunit A8 [Source:NCBI gene;Acc:417112]
98. TCP11L1 ENSGALG00000011688 2427 0.921 - - - - 0.921 - - - - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
99. EXO1 ENSGALG00000010748 7572 0.921 - - - - 0.921 - - - - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
100. ENSGALG00000011687 ENSGALG00000011687 4553 0.92 - - - - 0.920 - - - - -

There are 696 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA