Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PSMB4

Gene Name Gene ID Reads Annotation
PSMB4 ENSGALG00000000905 46735 proteasome subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:9541]











Genes with expression patterns similar to PSMB4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PSMB4 ENSGALG00000000905 46735 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 proteasome subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:9541]
2. TMEM199 ENSGALG00000023757 10781 1.673 - - - - - - 0.845 - - 0.828 transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
3. TPMT ENSGALG00000012687 9537 1.641 - - - - - - 0.875 0.766 - - thiopurine S-methyltransferase [Source:HGNC Symbol;Acc:HGNC:12014]
4. ARF6 ENSGALG00000026944 22014 1.625 - - - - - - 0.850 0.775 - - ADP ribosylation factor 6 [Source:NCBI gene;Acc:428927]
5. GLRX3 ENSGALG00000010464 22578 1.6 - - - - - - 0.775 - - 0.825 glutaredoxin 3 [Source:NCBI gene;Acc:423968]
6. PPP1CC ENSGALG00000004571 14748 1.595 - - - - - - 0.852 - - 0.743 protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
7. HMGN1 ENSGALG00000016067 17375 1.585 - - - - - - 0.843 0.742 - - high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]
8. PPP1R7 ENSGALG00000031766 22187 1.581 - - - - - - 0.831 0.750 - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
9. NDUFAB1 ENSGALG00000006073 40467 1.57 - - - - 0.704 - 0.866 - - - NADH:ubiquinone oxidoreductase subunit AB1 [Source:HGNC Symbol;Acc:HGNC:7694]
10. NEK6 ENSGALG00000001118 20333 1.568 - - - - - - 0.701 0.867 - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
11. MYCL ENSGALG00000024047 10367 1.531 - - - - - - 0.719 - - 0.812 MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
12. MLST8 ENSGALG00000005878 8116 1.529 - - - - - - 0.714 - - 0.815 MTOR associated protein, LST8 homolog [Source:HGNC Symbol;Acc:HGNC:24825]
13. TNRC6A ENSGALG00000006068 9166 1.519 - - - - - - 0.803 - - 0.716 trinucleotide repeat containing 6A [Source:HGNC Symbol;Acc:HGNC:11969]
14. MCFD2 ENSGALG00000010017 8905 1.518 - - - - - - 0.731 - - 0.787 multiple coagulation factor deficiency 2 [Source:NCBI gene;Acc:421413]
15. PPIH ENSGALG00000004874 25558 1.516 - - - - - - 0.807 - - 0.709 peptidylprolyl isomerase H [Source:NCBI gene;Acc:419507]
16. PSMB2 ENSGALG00000026421 51885 1.513 - - - - - - 0.783 - - 0.730 proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
17. TNFRSF1A ENSGALG00000039461 1569 1.507 - - - - - - - 0.756 - 0.751 TNF receptor superfamily member 1A [Source:NCBI gene;Acc:418325]
18. USP14 ENSGALG00000014920 18778 1.493 - - - - - - 0.711 - - 0.782 ubiquitin specific peptidase 14 [Source:HGNC Symbol;Acc:HGNC:12612]
19. WSB2 ENSGALG00000008151 13246 1.483 - - - - - - 0.729 - - 0.754 WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
20. CHD7 ENSGALG00000041080 10201 1.48 - - - - - - 0.753 - - 0.727 chromodomain helicase DNA binding protein 7 [Source:NCBI gene;Acc:421140]
21. SIAH2 ENSGALG00000010395 2126 1.467 - - - - - - 0.712 - - 0.755 siah E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:10858]
22. LRP4 ENSGALG00000032181 1756 1.453 - - - - - - 0.707 - - 0.746 LDL receptor related protein 4 [Source:HGNC Symbol;Acc:HGNC:6696]
23. RALB ENSGALG00000026493 14590 1.442 - - - - - - 0.733 0.709 - - RAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]
24. VCP ENSGALG00000001986 23679 1.441 - - - - 0.733 - 0.708 - - - valosin containing protein [Source:NCBI gene;Acc:427410]
25. ZZZ3 ENSGALG00000008988 3132 1.435 - - - - - - 0.734 - - 0.701 zinc finger ZZ-type containing 3, transcript variant X5
26. VMA21 ENSGALG00000009065 6432 1.431 - - - - - - 0.716 0.715 - - VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]
27. TOR1AIP1 ENSGALG00000029238 5843 1.427 - - - - - - 0.725 - - 0.702 torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
28. HMGB2 ENSGALG00000010745 89235 0.895 - - - - - - 0.895 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
29. EIF2S1 ENSGALG00000009565 63906 0.89 - - - - - - 0.890 - - - eukaryotic translation initiation factor 2 subunit alpha [Source:NCBI gene;Acc:423279]
30. DKC1 ENSGALG00000005054 30350 0.885 - - - - - - 0.885 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
31. MORF4L1 ENSGALG00000008146 29940 0.875 - - - - - - 0.875 - - - mortality factor 4 like 1 [Source:NCBI gene;Acc:554283]
32. ENSGALG00000009044 ENSGALG00000009044 14492 0.874 - - - - - - 0.874 - - -
33. DEK ENSGALG00000012684 14179 0.865 - - - - - - 0.865 - - - DEK proto-oncogene [Source:NCBI gene;Acc:420828]
34. SSBP1 ENSGALG00000012876 34256 0.864 - - - - - - 0.864 - - - single stranded DNA binding protein 1 [Source:NCBI gene;Acc:418122]
35. BRD7 ENSGALG00000003786 26858 0.861 - - - - - - 0.861 - - - bromodomain containing 7 [Source:NCBI gene;Acc:415730]
36. PTP4A2 ENSGALG00000003265 24826 0.86 - - - - - - 0.860 - - - protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:HGNC:9635]
37. RMI1 ENSGALG00000012592 3750 0.857 - - - - - - 0.857 - - - RecQ mediated genome instability 1 [Source:NCBI gene;Acc:431669]
38. QARS ENSGALG00000029980 4207 0.855 - - - - - - - - - 0.855 glutaminyl-tRNA synthetase [Source:NCBI gene;Acc:416057]
39. PDIA4 ENSGALG00000043006 22992 0.851 - - - - - - 0.851 - - - protein disulfide isomerase family A member 4 [Source:NCBI gene;Acc:420785]
40. AZIN1 ENSGALG00000029295 11085 0.851 - - - - - - 0.851 - - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
41. IMPA2 ENSGALG00000013814 4202 0.85 - - - - - - - - - 0.850 inositol monophosphatase 2 [Source:HGNC Symbol;Acc:HGNC:6051]
42. PDCD10 ENSGALG00000009477 7061 0.847 - - - - - - 0.847 - - - programmed cell death 10 [Source:NCBI gene;Acc:425003]
43. SSR3 ENSGALG00000028683 24334 0.846 - - - - - - 0.846 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
44. PNRC2 ENSGALG00000004122 19228 0.842 - - - - - - 0.842 - - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
45. PCNP ENSGALG00000015330 15750 0.841 - - - - - - 0.841 - - - PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
46. TFDP1 ENSGALG00000016823 17019 0.841 - - - - - - 0.841 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
47. EIF3B ENSGALG00000040999 49971 0.84 - - - - - - 0.840 - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
48. FTSJ3 ENSGALG00000032993 8929 0.839 - - - - - - - - - 0.839 FtsJ RNA methyltransferase homolog 3 [Source:NCBI gene;Acc:419943]
49. MBD4 ENSGALG00000020747 3644 0.839 - - - - - - - - - 0.839 methyl-CpG binding domain 4, DNA glycosylase [Source:NCBI gene;Acc:395428]
50. RNF220 ENSGALG00000010109 3114 0.838 - - - - - - - - - 0.838 ring finger protein 220 [Source:NCBI gene;Acc:424580]
51. FKBP12 FKBP12 64317 0.838 - - - - - - 0.838 - - -
52. DCTN3 ENSGALG00000021365 22839 0.838 - - - - - - - - - 0.838 dynactin subunit 3 [Source:NCBI gene;Acc:427404]
53. KPNA3 ENSGALG00000017009 17330 0.837 - - - - - - 0.837 - - - karyopherin subunit alpha 3 [Source:NCBI gene;Acc:418870]
54. Mar-05 Mar-05 6330 0.837 - - - - - - 0.837 - - -
55. TYSND1 ENSGALG00000033807 716 0.837 - - - - - - - - - 0.837 trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
56. TWF2 ENSGALG00000003977 6597 0.836 - - - - - - - - - 0.836 twinfilin actin binding protein 2 [Source:NCBI gene;Acc:415940]
57. RPRD2 ENSGALG00000014656 939 0.836 - - - - - - - - - 0.836 regulation of nuclear pre-mRNA domain containing 2 [Source:NCBI gene;Acc:425074]
58. SIKE1 ENSGALG00000002147 20836 0.834 - - - - - - 0.834 - - - suppressor of IKBKE 1 [Source:NCBI gene;Acc:419887]
59. ZFPM2 ENSGALG00000040079 942 0.834 - - - - - - - - - 0.834 zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
60. PSMB7 ENSGALG00000001103 42683 0.834 - - - - - - 0.834 - - - proteasome subunit beta 7 [Source:NCBI gene;Acc:378915]
61. F F 3639 0.83 - - - - - - - - - 0.830
62. MAP3K7 ENSGALG00000015596 15164 0.83 - - - - - - - 0.830 - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
63. METTL23 ENSGALG00000001790 7906 0.829 - - - - - - 0.829 - - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
64. MORN4 ENSGALG00000006149 7772 0.829 - - - - - - - - - 0.829 MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
65. TSPAN12 ENSGALG00000009029 2145 0.828 - - - - - - - - - 0.828 tetraspanin 12 [Source:NCBI gene;Acc:417763]
66. DUT ENSGALG00000038032 34659 0.828 - - - - - - 0.828 - - - deoxyuridine triphosphatase [Source:NCBI gene;Acc:769338]
67. SRA1 ENSGALG00000040453 266 0.828 - - - - - - - - - 0.828 steroid receptor RNA activator 1 [Source:NCBI gene;Acc:427608]
68. SOD1 ENSGALG00000015844 35836 0.827 - - - - - - 0.827 - - - superoxide dismutase 1, soluble [Source:NCBI gene;Acc:395938]
69. SERPINB6 ENSGALG00000012866 1582 0.827 - - - - - - - - - 0.827 serpin family B member 6 [Source:NCBI gene;Acc:420895]
70. RGP1 ENSGALG00000002394 5937 0.827 - - - - - - - - - 0.827 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
71. THRAP3 ENSGALG00000002144 21958 0.827 - - - - - - 0.827 - - - thyroid hormone receptor associated protein 3 [Source:NCBI gene;Acc:419623]
72. VOPP1 ENSGALG00000042773 771 0.827 - - - - - - - - - 0.827 VOPP1, WBP1/VOPP1 family member [Source:HGNC Symbol;Acc:HGNC:34518]
73. TRIP4 ENSGALG00000030672 1255 0.826 - - - - - - - - - 0.826 thyroid hormone receptor interactor 4 [Source:HGNC Symbol;Acc:HGNC:12310]
74. WWC1 ENSGALG00000001826 4666 0.826 - - - - - - - - - 0.826 WW and C2 domain containing 1 [Source:NCBI gene;Acc:416167]
75. PTPRE ENSGALG00000009823 250 0.826 - - - - - - - - - 0.826 protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
76. BZFP1 ENSGALG00000027546 632 0.826 - - - - - - - - - 0.826 B-locus zinc finger protein 1 [Source:NCBI gene;Acc:396247]
77. RAB34 ENSGALG00000026315 1193 0.826 - - - - - - - - - 0.826 RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
78. TRIM24 ENSGALG00000012823 2725 0.826 - - - - - - - - - 0.826 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
79. SFPQ ENSGALG00000002514 66832 0.826 - - - - - - 0.826 - - - splicing factor proline and glutamine rich [Source:HGNC Symbol;Acc:HGNC:10774]
80. C5orf24 ENSGALG00000006371 1573 0.826 - - - - - - - - - 0.826 chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
81. SDHD ENSGALG00000007878 25129 0.825 - - - - - - 0.825 - - - succinate dehydrogenase complex subunit D [Source:NCBI gene;Acc:419793]
82. SLC25A3 ENSGALG00000011514 62606 0.825 - - - - - - 0.825 - - - solute carrier family 25 member 3 [Source:NCBI gene;Acc:417924]
83. RAD21 ENSGALG00000029523 25658 0.825 - - - - - - 0.825 - - - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
84. PROCR ENSGALG00000006547 645 0.824 - - - - - - - - - 0.824 protein C receptor [Source:NCBI gene;Acc:424867]
85. PMVK ENSGALG00000046656 645 0.823 - - - - - - - - - 0.823 phosphomevalonate kinase [Source:HGNC Symbol;Acc:HGNC:9141]
86. FAM96B 14435 0.823 - - - - - - - - - 0.823 family with sequence similarity 96 member B
87. ARHGAP19 ENSGALG00000007609 3655 0.822 - - - - - - - - - 0.822 Rho GTPase activating protein 19 [Source:NCBI gene;Acc:423846]
88. PKDCCB ENSGALG00000011166 74 0.822 - - - - - - - - - 0.822 protein kinase domain containing, cytoplasmic b
89. PGAM5 ENSGALG00000002137 7700 0.821 - - - - - - 0.821 - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
90. AK6 ENSGALG00000020534 4791 0.821 - - - - - - - - - 0.821 adenylate kinase 6 [Source:NCBI gene;Acc:425215]
91. HMGN3 ENSGALG00000015880 30919 0.821 - - - - - - 0.821 - - - high mobility group nucleosomal binding domain 3 [Source:NCBI gene;Acc:421853]
92. NFKBIE ENSGALG00000044525 633 0.821 - - - - - - - - - 0.821 NFKB inhibitor epsilon [Source:HGNC Symbol;Acc:HGNC:7799]
93. ENSGALG00000004643 ENSGALG00000004643 2297 0.821 - - - - - - - - - 0.821
94. SNRNP40 ENSGALG00000000615 32298 0.821 - - - - - - 0.821 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
95. PRR11 2624 0.821 - - - - - - - - - 0.821 proline rich 11, transcript variant X8
96. RFWD3 2315 0.821 - - - - - - - - - 0.821 ring finger and WD repeat domain 3
97. EWSR1 ENSGALG00000008149 13014 0.82 - - - - - - 0.820 - - - EWS RNA binding protein 1 [Source:NCBI gene;Acc:417022]
98. GRPEL2 ENSGALG00000002673 105 0.82 - - - - - - - - - 0.820 GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
99. VAV2 ENSGALG00000002699 503 0.82 - - - - - - - - - 0.820 vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]
100. MASP1 ENSGALG00000007419 141 0.82 - - - - - - - - - 0.820 mannan binding lectin serine peptidase 1 [Source:NCBI gene;Acc:407088]

There are 727 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA