Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PSMB2

Gene Name Gene ID Reads Annotation
PSMB2 ENSGALG00000026421 51885 proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]











Genes with expression patterns similar to PSMB2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PSMB2 ENSGALG00000026421 51885 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
2. EPFIP1L ENSGALG00000007683 18050 1.696 - - - - 0.865 - 0.831 - - - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
3. COX5A ENSGALG00000014121 55281 1.692 - - - - 0.869 - 0.823 - - - cytochrome c oxidase subunit 5A [Source:HGNC Symbol;Acc:HGNC:2267]
4. INCENP ENSGALG00000007537 16617 1.685 - - - - 0.855 - 0.830 - - - inner centromere protein [Source:NCBI gene;Acc:396270]
5. RALB ENSGALG00000026493 14590 1.647 - - - - 0.850 - 0.797 - - - RAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]
6. SPG21 ENSGALG00000007262 8050 1.642 - - - - 0.817 - 0.825 - - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
7. CCDC59 ENSGALG00000028648 9272 1.634 - - - - 0.821 - 0.813 - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
8. XRN2 ENSGALG00000008372 22164 1.626 - - - - 0.766 - 0.860 - - - 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]
9. NUP37 ENSGALG00000012759 9985 1.626 - - - - 0.851 - 0.775 - - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
10. UQCRC2 ENSGALG00000002490 23477 1.623 - - - - 0.813 - 0.810 - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
11. SLC41A1 ENSGALG00000000721 1604 1.618 - - 0.837 - - - 0.781 - - - solute carrier family 41 member 1 [Source:HGNC Symbol;Acc:HGNC:19429]
12. FAM98A ENSGALG00000010428 9585 1.608 - - - - 0.826 - 0.782 - - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
13. HMGB3 ENSGALG00000009071 12011 1.599 - - - - 0.815 - 0.784 - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
14. SPCS3 ENSGALG00000010839 19106 1.598 - - 0.749 - - - 0.849 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
15. SEC61A2 ENSGALG00000036300 4235 1.594 - - - - 0.817 - 0.777 - - - Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321620]
16. BRP44L BRP44L 30452 1.593 - - - - 0.859 - 0.734 - - -
17. CDC5L ENSGALG00000016704 22893 1.585 - - 0.731 - 0.854 - - - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
18. UBE2G2 ENSGALG00000005667 12689 1.582 - - - - 0.817 - 0.765 - - - ubiquitin conjugating enzyme E2 G2 [Source:NCBI gene;Acc:424837]
19. PGAM5 ENSGALG00000002137 7700 1.581 - - - - 0.809 - 0.772 - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
20. SCCPDH ENSGALG00000010641 8624 1.58 - - 0.710 - - - 0.870 - - - saccharopine dehydrogenase (putative) [Source:NCBI gene;Acc:421485]
21. SEC63 ENSGALG00000015308 11596 1.576 - - - - 0.809 - 0.767 - - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
22. LUC7L2 ENSGALG00000036238 11817 1.564 - - - - 0.830 - 0.734 - - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
23. C4orf27 C4orf27 16724 1.554 - - - - 0.823 - 0.731 - - -
24. RUNX1T1 ENSGALG00000033091 17529 1.553 - - - - 0.849 - 0.704 - - - RUNX1 translocation partner 1 [Source:NCBI gene;Acc:395503]
25. AAMP ENSGALG00000011445 2528 1.553 - - 0.727 - - - 0.826 - - - angio associated migratory cell protein [Source:NCBI gene;Acc:769880]
26. PSMD14 ENSGALG00000011128 13335 1.55 - - 0.738 - 0.812 - - - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
27. SPCS1 ENSGALG00000001655 7718 1.546 - - 0.711 - - - 0.835 - - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
28. NDUFC2 ENSGALG00000029172 26136 1.545 - - 0.740 - - - 0.805 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
29. MRPL46 ENSGALG00000006782 5033 1.545 - - - - 0.809 - 0.736 - - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
30. IBA57 ENSGALG00000005328 4362 1.54 - - - - 0.810 - 0.730 - - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
31. NUPL1 NUPL1 8197 1.538 - - 0.702 - - - 0.836 - - -
32. PPAPDC1B PPAPDC1B 6698 1.534 - - - - 0.800 - 0.734 - - -
33. ESRP2 ENSGALG00000003374 4436 1.532 - - - - 0.808 - 0.724 - - - epithelial splicing regulatory protein 2 [Source:NCBI gene;Acc:415710]
34. UBE2B ENSGALG00000032664 6069 1.531 - - 0.729 - - - 0.802 - - - ubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]
35. PDPK1 ENSGALG00000006418 13412 1.531 - - 0.792 - - - 0.739 - - - 3-phosphoinositide dependent protein kinase 1 [Source:NCBI gene;Acc:416588]
36. WSB2 ENSGALG00000008151 13246 1.519 - - 0.716 - - - 0.803 - - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
37. RPL36AL ENSGALG00000004952 205590 1.518 - - - - 0.725 - 0.793 - - - ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
38. PSMB4 ENSGALG00000000905 46735 1.513 - - - - - - 0.783 - - 0.730 proteasome subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:9541]
39. MRPL15 ENSGALG00000041086 16820 1.513 - - - - - - 0.808 - - 0.705 mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
40. ASF1A ENSGALG00000014887 11319 1.51 - - 0.788 - - - 0.722 - - - anti-silencing function 1A histone chaperone [Source:NCBI gene;Acc:723780]
41. MRPL22 ENSGALG00000003919 2760 1.509 - - - - 0.802 - 0.707 - - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
42. MORF4L1 ENSGALG00000008146 29940 1.503 - - - - - - 0.778 0.725 - - mortality factor 4 like 1 [Source:NCBI gene;Acc:554283]
43. FZD2 ENSGALG00000030847 3286 1.501 - - - - - 0.743 0.758 - - - frizzled class receptor 2 [Source:NCBI gene;Acc:374061]
44. SP3 ENSGALG00000031796 8997 1.495 - - 0.738 - - - 0.757 - - - Sp3 transcription factor [Source:NCBI gene;Acc:395302]
45. C12H3ORF37 C12H3ORF37 6362 1.494 - - 0.761 - - - 0.733 - - -
46. CSTF2 ENSGALG00000006760 8820 1.484 - - - - - - 0.764 - - 0.720 cleavage stimulation factor subunit 2 [Source:NCBI gene;Acc:422258]
47. CKI CKI 2845 1.484 - - - - - - 0.753 - - 0.731
48. GTF2H2 ENSGALG00000002399 2361 1.484 - - 0.756 - - - 0.728 - - - general transcription factor IIH subunit 2, transcript variant X2
49. SHMT1 ENSGALG00000005046 1430 1.482 - - 0.713 - - - 0.769 - - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
50. PTCD3 ENSGALG00000015773 3059 1.48 - - 0.764 - - - 0.716 - - - pentatricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:24717]
51. CAMSAP1 ENSGALG00000001692 2617 1.479 - - 0.733 - - - 0.746 - - - calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
52. NT5C3B ENSGALG00000003651 5190 1.477 - - 0.712 - - - 0.765 - - - 5'-nucleotidase, cytosolic IIIB [Source:NCBI gene;Acc:420034]
53. BAG5 ENSGALG00000031062 4498 1.475 - - 0.720 - - - 0.755 - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
54. STARD3NL ENSGALG00000033038 4851 1.468 - - 0.739 - - - 0.729 - - - STARD3 N-terminal like [Source:HGNC Symbol;Acc:HGNC:19169]
55. PSMC3IP ENSGALG00000019741 5428 1.467 - - - - - - 0.736 - - 0.731 PSMC3 interacting protein [Source:HGNC Symbol;Acc:HGNC:17928]
56. LSM1 ENSGALG00000003245 4701 1.465 - - 0.745 - - - 0.720 - - - LSM1 homolog, mRNA degradation associated [Source:HGNC Symbol;Acc:HGNC:20472]
57. RFK ENSGALG00000033558 1364 1.461 - - 0.745 - - - 0.716 - - - riboflavin kinase, transcript variant X3
58. IMPA2 ENSGALG00000013814 4202 1.459 - - - - - - 0.734 - - 0.725 inositol monophosphatase 2 [Source:HGNC Symbol;Acc:HGNC:6051]
59. AMBRA1 ENSGALG00000008358 2865 1.447 - - 0.723 - - - 0.724 - - - autophagy and beclin 1 regulator 1 [Source:HGNC Symbol;Acc:HGNC:25990]
60. SIRT6 ENSGALG00000001245 3716 1.447 - - - - - - 0.702 - - 0.745 sirtuin 6 [Source:NCBI gene;Acc:428332]
61. LGALS1 ENSGALG00000012420 13993 1.436 - - 0.700 - - - 0.736 - - - galectin 1 [Source:NCBI gene;Acc:396491]
62. SBNO1 ENSGALG00000003392 6731 1.435 - - 0.726 - - - 0.709 - - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
63. RAD50 ENSGALG00000006794 4308 1.433 - - 0.722 - - - 0.711 - - - RAD50 double strand break repair protein, transcript variant X4
64. GRPEL1 ENSGALG00000015549 11246 1.431 - - - - - - 0.708 - - 0.723 GrpE like 1, mitochondrial [Source:NCBI gene;Acc:422865]
65. C18orf8 C18orf8 1512 1.423 - - 0.713 - - - 0.710 - - -
66. MCFD2 ENSGALG00000010017 8905 1.418 - - - - - - 0.714 - - 0.704 multiple coagulation factor deficiency 2 [Source:NCBI gene;Acc:421413]
67. PRELID1 ENSGALG00000002990 55592 0.918 - - - - - - 0.918 - - - PRELI domain containing 1 [Source:NCBI gene;Acc:395819]
68. CSE1L ENSGALG00000004707 20653 0.917 - - - - - - 0.917 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
69. EIF4A2 ENSGALG00000008684 58507 0.917 - - - - - - 0.917 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
70. GLRX3 ENSGALG00000010464 22578 0.916 - - - - - - 0.916 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
71. NDUFAB1 ENSGALG00000006073 40467 0.914 - - - - - - 0.914 - - - NADH:ubiquinone oxidoreductase subunit AB1 [Source:HGNC Symbol;Acc:HGNC:7694]
72. SSR3 ENSGALG00000028683 24334 0.904 - - - - - - 0.904 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
73. EHD3 ENSGALG00000009086 14407 0.901 - - - - - - 0.901 - - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
74. YWHAZ ENSGALG00000031387 84985 0.901 - - - - - - 0.901 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
75. TXNDC17 ENSGALG00000027950 45004 0.9 - - - - - - 0.900 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
76. FKBP12 FKBP12 64317 0.898 - - - - - - 0.898 - - -
77. EIF3H ENSGALG00000040522 39919 0.896 - - - - 0.896 - - - - - eukaryotic translation initiation factor 3 subunit H [Source:NCBI gene;Acc:420288]
78. ENSGALG00000017396 ENSGALG00000017396 9028 0.892 - - - - - - 0.892 - - -
79. VBP1 VBP1 14482 0.889 - - - - - - 0.889 - - -
80. DPYSL2 ENSGALG00000000227 9668 0.888 - - - - - - 0.888 - - - dihydropyrimidinase like 2 [Source:NCBI gene;Acc:395155]
81. NDUFA12 ENSGALG00000011325 19807 0.885 - - - - - - 0.885 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
82. ILF2 ENSGALG00000011570 23050 0.885 - - - - - - 0.885 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
83. CTCF 10811 0.884 - - - - - - 0.884 - - - CCCTC-binding factor, transcript variant X2
84. ITGB1 ENSGALG00000007145 19551 0.884 - - - - - - 0.884 - - - integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
85. UTP11L UTP11L 11927 0.884 - - - - - - 0.884 - - -
86. HMGB2 ENSGALG00000010745 89235 0.884 - - - - - - 0.884 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
87. C11H16ORF80 C11H16ORF80 18673 0.883 - - - - - - 0.883 - - -
88. SNRNP40 ENSGALG00000000615 32298 0.882 - - - - - - 0.882 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
89. SKAP2 ENSGALG00000030081 13746 0.882 - - - - - - 0.882 - - - src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:HGNC:15687]
90. H3-IX_1 H3-IX_1 54392 0.882 - - - - 0.882 - - - - -
91. DKC1 ENSGALG00000005054 30350 0.881 - - - - - - 0.881 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
92. MCTS1 ENSGALG00000008517 27514 0.881 - - - - - - 0.881 - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
93. NOC4L ENSGALG00000002272 9644 0.88 - - - - - - 0.880 - - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
94. SF3A2 ENSGALG00000021679 12580 0.879 - - - - - - 0.879 - - - splicing factor 3a subunit 2 [Source:NCBI gene;Acc:420077]
95. EIF2B3 ENSGALG00000010140 7992 0.879 - - - - - - 0.879 - - - eukaryotic translation initiation factor 2B subunit gamma [Source:NCBI gene;Acc:424587]
96. RUVBL1 ENSGALG00000005931 9379 0.878 - - - - - - 0.878 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
97. MRPL20 ENSGALG00000001542 28764 0.878 - - - - - - 0.878 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
98. HSPA4 ENSGALG00000040882 20966 0.878 - - - - - - 0.878 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
99. RANBP1 ENSGALG00000002107 17715 0.876 - - - - - - 0.876 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
100. TMEM167A ENSGALG00000027332 13862 0.876 - - - - - - 0.876 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]

There are 1219 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA