Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PSD

Gene Name Gene ID Reads Annotation
PSD PSD 367










Genes with expression patterns similar to PSD

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. PSD PSD 367 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. brf1a ENSDARG00000017835 206 2.373 0.885 - - - - - - 0.784 0.704 BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]
3. asb6 ENSDARG00000007125 389 1.885 0.886 - - - - - 0.999 - - ankyrin repeat and SOCS box containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-338]
4. tmem181 ENSDARG00000045910 2288 1.875 0.884 - - - - - 0.991 - - transmembrane protein 181 [Source:ZFIN;Acc:ZDB-GENE-060503-309]
5. NBEAL1 ENSDARG00000099547 1112 1.869 0.886 - - - - - 0.983 - - neurobeachin-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-544]
6. itpkcb ENSDARG00000067741 2370 1.869 0.894 - - - - - 0.975 - - inositol-trisphosphate 3-kinase Cb [Source:ZFIN;Acc:ZDB-GENE-080225-27]
7. FUCA1 FUCA1 1446 1.859 0.891 - - - - - 0.968 - -
8. dnajb9a ENSDARG00000052072 578 1.831 - - - 0.833 - - 0.998 - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
9. sigmar1 ENSDARG00000011418 1240 1.82 0.829 - - - - - 0.991 - - sigma non-opioid intracellular receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1006]
10. PLXNB2 PLXNB2 99 1.804 - 0.805 - - - - 0.999 - -
11. mpzl3 959 1.804 0.830 - - - - - 0.974 - - myelin protein zero-like 3
12. myof ENSDARG00000006112 618 1.798 0.829 - - - - - 0.969 - - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
13. mob2b ENSDARG00000012005 395 1.795 - 0.798 - - - - 0.997 - - MOB kinase activator 2b [Source:ZFIN;Acc:ZDB-GENE-060616-319]
14. zgc:153372 ENSDARG00000068967 358 1.779 - - - 0.784 - - 0.995 - - zgc:153372 [Source:ZFIN;Acc:ZDB-GENE-060929-680]
15. dyrk1b ENSDARG00000070187 2777 1.769 0.811 - - - - - 0.958 - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B [Source:ZFIN;Acc:ZDB-GENE-060503-499]
16. etfdh ENSDARG00000038834 1811 1.76 0.797 - - - - - 0.963 - - electron transfer flavoprotein dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040912-168]
17. pan3 ENSDARG00000031637, ENSDARG00000111004 613 1.755 - - - - - 0.756 0.999 - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
18. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.736 0.761 - - - - - 0.975 - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
19. abcb7 ENSDARG00000062795 1404 1.735 0.773 - - - - - 0.962 - - ATP-binding cassette, sub-family B (MDR/TAP), member 7 [Source:ZFIN;Acc:ZDB-GENE-050517-10]
20. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 1.728 0.801 - - - - - 0.927 - - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
21. slc9a6a ENSDARG00000009209, ENSDARG00000111329 184 1.722 0.911 - - 0.811 - - - - - solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6a [Source:ZFIN;Acc:ZDB-GENE-070424-104]
22. smx5 ENSDARG00000070867, ENSDARG00000111500, ENSDARG00000113078, ENSDARG00000113975 3132 1.719 - - - 0.763 - - 0.956 - - smx5 [Source:ZFIN;Acc:ZDB-GENE-000616-10]
23. reps1 ENSDARG00000002877 962 1.708 - - - - - - 0.988 0.720 - RALBP1 associated Eps domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9536]
24. gpr37l1a ENSDARG00000006079 422 1.707 0.914 0.793 - - - - - - - G protein-coupled receptor 37 like 1a [Source:ZFIN;Acc:ZDB-GENE-110411-20]
25. tmem184a ENSDARG00000104538 661 1.703 - - - - - - 0.960 - 0.743 transmembrane protein 184a [Source:ZFIN;Acc:ZDB-GENE-040426-2925]
26. rad51 ENSDARG00000041411, ENSDARG00000111948 1056 1.698 0.712 - - - - - 0.986 - - RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286]
27. BX957278.1 ENSDARG00000010940 317 1.693 - - - - - - 0.989 - 0.704
28. wu:fb12e11 wu:fb12e11 2332 1.686 0.954 - - 0.732 - - - - -
29. ifrd1 ENSDARG00000068708 2858 1.659 0.726 - - - - - 0.933 - - interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]
30. pigq ENSDARG00000038097 486 1.653 0.908 - - 0.745 - - - - - phosphatidylinositol glycan anchor biosynthesis, class Q [Source:ZFIN;Acc:ZDB-GENE-030131-9793]
31. si:dkey-193p11.2 ENSDARG00000096712 3500 1.641 0.742 - - - - - 0.899 - - si:dkey-193p11.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8407]
32. pou5f3 ENSDARG00000044774 212 1.637 0.889 - - - - - - - 0.748 POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
33. exoc3l4 ENSDARG00000058180 923 1.632 0.822 - - 0.810 - - - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
34. plekhf2 ENSDARG00000021141 529 1.626 0.881 - - - - - - - 0.745 pleckstrin homology domain containing, family F (with FYVE domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-884]
35. arhgap22 ENSDARG00000021255 117 1.625 - - - 0.841 - - - 0.784 - Rho GTPase activating protein 22 [Source:ZFIN;Acc:ZDB-GENE-090313-87]
36. fzd7b ENSDARG00000027589 2562 1.621 0.873 - - - - 0.748 - - - frizzled class receptor 7b [Source:ZFIN;Acc:ZDB-GENE-990415-229]
37. CABZ01032467.1 CABZ01032467.1 400 1.609 - - - 0.826 - - - 0.783 -
38. pus7l_1 ENSDARG00000069780 49 1.608 - - - 0.833 - - - 0.775 - pseudouridylate synthase 7, like [Source:ZFIN;Acc:ZDB-GENE-050419-188]
39. CABZ01087514.1 ENSDARG00000090861 245 1.597 - 0.834 - - - - - 0.763 - peroxisomal membrane protein PMP34-like [Source:NCBI gene;Acc:566378]
40. rassf10a 417 1.592 0.886 - - - - - - 0.706 - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
41. FEZ2_1 FEZ2_1 153 1.58 - 0.782 - 0.798 - - - - -
42. haao ENSDARG00000076487 143 1.578 - - - 0.824 - - - 0.754 - 3-hydroxyanthranilate 3,4-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-041114-89]
43. kcnj11 ENSDARG00000051880, ENSDARG00000114565 211 1.553 - 0.721 - 0.832 - - - - - potassium inwardly-rectifying channel, subfamily J, member 11 [Source:ZFIN;Acc:ZDB-GENE-060308-2]
44. adat3 ENSDARG00000005640 96 1.545 - 0.736 - 0.809 - - - - - adenosine deaminase, tRNA-specific 3 [Source:ZFIN;Acc:ZDB-GENE-030616-531]
45. htr2cl1 ENSDARG00000018228, ENSDARG00000113913 131 1.539 - - - 0.825 - 0.714 - - - 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1 [Source:ZFIN;Acc:ZDB-GENE-081104-48]
46. siae ENSDARG00000040527, ENSDARG00000111850 186 1.528 - 0.805 - - - - - - 0.723 sialic acid acetylesterase [Source:ZFIN;Acc:ZDB-GENE-040426-1032]
47. acsl3a ENSDARG00000032079 897 1.512 - - - - - - 0.756 0.756 - acyl-CoA synthetase long chain family member 3a [Source:ZFIN;Acc:ZDB-GENE-050420-181]
48. ndufb7 ENSDARG00000033789 5898 1.504 - - - 0.773 - - 0.731 - - NADH:ubiquinone oxidoreductase subunit B7 [Source:ZFIN;Acc:ZDB-GENE-040426-1886]
49. tspo ENSDARG00000026655 12517 1.491 0.750 - - - - - 0.741 - - translocator protein [Source:ZFIN;Acc:ZDB-GENE-041010-125]
50. cog8 ENSDARG00000002798 229 1.481 - - - 0.764 - 0.717 - - - component of oligomeric golgi complex 8 [Source:ZFIN;Acc:ZDB-GENE-050320-74]
51. TMEM128 552 1.453 - 0.743 - - - 0.710 - - - transmembrane protein 128
52. raf1b ENSDARG00000059406 301 1.443 - - - - - 0.726 - - 0.717 Raf-1 proto-oncogene, serine/threonine kinase b [Source:ZFIN;Acc:ZDB-GENE-090826-2]
53. SLITRK6 ENSDARG00000098769 217 1 - - - - - - 1.000 - - SLIT and NTRK-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2816]
54. EXO5 ENSDARG00000042727, ENSDARG00000111772 282 0.999 - - - - - - 0.999 - - exonuclease 5 [Source:ZFIN;Acc:ZDB-GENE-051113-108]
55. bin2b ENSDARG00000010255 2649 0.999 - - - - - - 0.999 - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
56. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 0.999 - - - - - - 0.999 - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
57. socs3a ENSDARG00000025428 349 0.999 - - - - - - 0.999 - - suppressor of cytokine signaling 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7349]
58. VPS37C ENSDARG00000031836 906 0.999 - - - - - - 0.999 - - vacuolar protein sorting 37 homolog C (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061110-126]
59. zgc:63691 zgc:63691 180 0.999 - - - - - - 0.999 - -
60. asb3 ENSDARG00000005246 317 0.999 - - - - - - 0.999 - - ankyrin repeat and SOCS box containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6142]
61. ICT1 356 0.999 - - - - - - 0.999 - - immature colon carcinoma transcript 1
62. baz2a ENSDARG00000102974 266 0.999 - - - - - - 0.999 - - bromodomain adjacent to zinc finger domain, 2A [Source:ZFIN;Acc:ZDB-GENE-041010-202]
63. tbccd1 ENSDARG00000056886, ENSDARG00000114427 1389 0.999 - - - - - - 0.999 - - TBCC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-222]
64. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 0.999 - - - - - - 0.999 - - ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
65. ZNF337_10 ZNF337_10 183 0.999 - - - - - - 0.999 - -
66. znf687a ENSDARG00000102774 393 0.999 - - - - - - 0.999 - - zinc finger protein 687a [Source:ZFIN;Acc:ZDB-GENE-100922-32]
67. si:ch211-51o18.2 si:ch211-51o18.2 111 0.999 - - - - - - 0.999 - -
68. PRR5 PRR5 630 0.999 - - - - - - 0.999 - -
69. zgc:173962 zgc:173962 67 0.999 - - - - - - 0.999 - -
70. sult3st1 ENSDARG00000009885 218 0.999 - - - - - - 0.999 - - sulfotransferase family 3, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-061207-52]
71. lppr4a lppr4a 141 0.999 - - - - - - 0.999 - -
72. BX324179.3 BX324179.3 326 0.999 - - - - - - 0.999 - -
73. PDZD8 ENSDARG00000088699 844 0.999 - - - - - - 0.999 - - PDZ domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-110310-2]
74. plekhh1 ENSDARG00000053835 2123 0.998 - - - - - - 0.998 - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
75. prdm5 ENSDARG00000006288 472 0.998 - - - - - - 0.998 - - PR domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040708-1]
76. si:ch73-108h4.3 si:ch73-108h4.3 193 0.998 - - - - - - 0.998 - -
77. dhodh ENSDARG00000051889 401 0.998 - - - - - - 0.998 - - dihydroorotate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-3157]
78. PRKD3 ENSDARG00000079967 192 0.998 - - - - - - 0.998 - - protein kinase D3 [Source:ZFIN;Acc:ZDB-GENE-130530-880]
79. unk ENSDARG00000000935 353 0.998 - - - - - - 0.998 - - unkempt family zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-707]
80. irf8 ENSDARG00000056407 85 0.998 - - - - - - 0.998 - - interferon regulatory factor 8 [Source:ZFIN;Acc:ZDB-GENE-040718-367]
81. plxna4 ENSDARG00000019328 782 0.998 - - - - - - 0.998 - - plexin A4 [Source:ZFIN;Acc:ZDB-GENE-030131-4663]
82. OCRL ENSDARG00000078106, ENSDARG00000115715, ENSDARG00000117019 317 0.998 - - - - - - 0.998 - - oculocerebrorenal syndrome of Lowe [Source:ZFIN;Acc:ZDB-GENE-061110-61]
83. igfbp3 ENSDARG00000099144 269 0.998 - - - - - - 0.998 - - insulin-like growth factor binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040412-1]
84. AMDHD1 ENSDARG00000007366 89 0.998 - - - - - - 0.998 - - amidohydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28577]
85. illr4 ENSDARG00000008075 164 0.998 - - - - - - 0.998 - - immune-related, lectin-like receptor 4 [Source:ZFIN;Acc:ZDB-GENE-050311-5]
86. ctdnep1a ENSDARG00000016519, ENSDARG00000115280 596 0.998 - - - - - - 0.998 - - CTD nuclear envelope phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-041114-177]
87. ERRFI1 ERRFI1 664 0.998 - - - - - - 0.998 - -
88. zdhhc3 zdhhc3 152 0.998 - - - - - - 0.998 - -
89. kbtbd7 ENSDARG00000078001 367 0.997 - - - - - - 0.997 - - kelch repeat and BTB (POZ) domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-070912-204]
90. armc1l ENSDARG00000020887 1219 0.997 - - - - - - 0.997 - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
91. FBXO31 ENSDARG00000062195 753 0.997 - - - - - - 0.997 - - F-box protein 31 [Source:ZFIN;Acc:ZDB-GENE-070628-4]
92. zgc:136763 zgc:136763 190 0.997 - - - - - - 0.997 - -
93. tmco3 ENSDARG00000075108 368 0.997 - - - - - - 0.997 - - transmembrane and coiled-coil domains 3 [Source:ZFIN;Acc:ZDB-GENE-071030-1]
94. zgc:162612 ENSDARG00000079699 244 0.997 - - - - - - 0.997 - - zgc:162612 [Source:ZFIN;Acc:ZDB-GENE-070410-88]
95. TMEM184B TMEM184B 1280 0.997 - - - - - - 0.997 - -
96. nhp2l1a nhp2l1a 993 0.997 - - - - - - 0.997 - -
97. cul1b ENSDARG00000007691 719 0.997 - - - - - - 0.997 - - cullin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2887]
98. zdhhc5a ENSDARG00000016263 625 0.996 - - - - - - 0.996 - - zinc finger, DHHC-type containing 5a [Source:ZFIN;Acc:ZDB-GENE-090312-92]
99. si:ch211-198d23.1 ENSDARG00000092574 104 0.996 - - - - - - 0.996 - - si:ch211-198d23.1 [Source:ZFIN;Acc:ZDB-GENE-081104-163]
100. fgfr3 ENSDARG00000004782, ENSDARG00000114756 1791 0.996 - - - - - - 0.996 - - fibroblast growth factor receptor 3 [Source:ZFIN;Acc:ZDB-GENE-000816-1]

There are 1488 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA