Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PRRX2

Gene Name Gene ID Reads Annotation
PRRX2 ENSGALG00000028236 1990 paired related homeobox 2 [Source:NCBI gene;Acc:396314]











Genes with expression patterns similar to PRRX2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PRRX2 ENSGALG00000028236 1990 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 paired related homeobox 2 [Source:NCBI gene;Acc:396314]
2. CREB5 ENSGALG00000038265 92 1.476 - - - - - 0.721 - - - 0.755 cAMP responsive element binding protein 5 [Source:HGNC Symbol;Acc:HGNC:16844]
3. TDRD1 ENSGALG00000046180 612 1 - - - - - - - 1.000 - - tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
4. ENSGALG00000028413 ENSGALG00000028413 551 1 - - - - - - - 1.000 - -
5. USP42 ENSGALG00000003378 1392 1 - - - - - - - 1.000 - - ubiquitin specific peptidase 42 [Source:HGNC Symbol;Acc:HGNC:20068]
6. TNFRSF21 ENSGALG00000016719 2762 1 - - - - - - - 1.000 - - TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
7. TMEM69 ENSGALG00000010279 716 1 - - - - - - - 1.000 - - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
8. USP30 ENSGALG00000040265 2000 1 - - - - - - - 1.000 - - ubiquitin specific peptidase 30 [Source:HGNC Symbol;Acc:HGNC:20065]
9. GNA12 ENSGALG00000004368 692 1 - - - - - - - 1.000 - - G protein subunit alpha 12 [Source:HGNC Symbol;Acc:HGNC:4380]
10. C9orf89 C9orf89 3056 1 - - - - - - - 1.000 - -
11. STAMBP ENSGALG00000042555 1362 1 - - - - - - - 1.000 - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
12. SIN3A ENSGALG00000001644 1141 0.999 - - - - - - - 0.999 - - SIN3 transcription regulator family member A [Source:NCBI gene;Acc:415307]
13. RRBP1 ENSGALG00000008676 5376 0.999 - - - - - - - 0.999 - - ribosome binding protein 1 [Source:NCBI gene;Acc:396414]
14. SLBP ENSGALG00000015712 5586 0.999 - - - - - - - 0.999 - - stem-loop binding protein [Source:NCBI gene;Acc:422902]
15. CREB1 ENSGALG00000008494 2219 0.999 - - - - - - - 0.999 - - cAMP responsive element binding protein 1 [Source:NCBI gene;Acc:395099]
16. VEGFC ENSGALG00000010847 2197 0.999 - - - - - - - 0.999 - - vascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]
17. ZNF462 ENSGALG00000015451 12653 0.999 - - - - - - - 0.999 - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
18. CTU2 4818 0.999 - - - - - - - 0.999 - - cytosolic thiouridylase subunit 2, transcript variant X3
19. SLC52A3 ENSGALG00000006194 3952 0.998 - - - - - - - 0.998 - - solute carrier family 52 member 3 [Source:HGNC Symbol;Acc:HGNC:16187]
20. VPS36 ENSGALG00000017026 3658 0.998 - - - - - - - 0.998 - - vacuolar protein sorting 36 homolog [Source:HGNC Symbol;Acc:HGNC:20312]
21. PPAT ENSGALG00000013728 7563 0.997 - - - - - - - 0.997 - - phosphoribosyl pyrophosphate amidotransferase [Source:NCBI gene;Acc:422743]
22. GYG1 ENSGALG00000035535 6311 0.997 - - - - - - - 0.997 - - glycogenin 1 [Source:NCBI gene;Acc:425050]
23. PHAX ENSGALG00000014691 8114 0.997 - - - - - - - 0.997 - - phosphorylated adaptor for RNA export [Source:NCBI gene;Acc:427124]
24. CWC22 ENSGALG00000009001 5984 0.997 - - - - - - - 0.997 - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
25. ADAR ENSGALG00000021475 6004 0.997 - - - - - - - 0.997 - - adenosine deaminase, RNA specific [Source:HGNC Symbol;Acc:HGNC:225]
26. FAT1 ENSGALG00000013579 6030 0.996 - - - - - - - 0.996 - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
27. INTS2 ENSGALG00000005269 6966 0.996 - - - - - - - 0.996 - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]
28. KLHDC2 ENSGALG00000012244 12903 0.994 - - - - - - - 0.994 - - kelch domain containing 2 [Source:NCBI gene;Acc:423569]
29. LMO7 ENSGALG00000016920 3809 0.994 - - - - - - - 0.994 - - LIM domain 7 [Source:HGNC Symbol;Acc:HGNC:6646]
30. PTK7 ENSGALG00000008609 8081 0.994 - - - - - - - 0.994 - - protein tyrosine kinase 7 (inactive) [Source:NCBI gene;Acc:421257]
31. PDCD6 ENSGALG00000013400 7611 0.992 - - - - - - - 0.992 - - programmed cell death 6 [Source:HGNC Symbol;Acc:HGNC:8765]
32. MAP4K3 ENSGALG00000039720 5124 0.982 - - - - - - - 0.982 - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
33. NAA30 ENSGALG00000012098 4681 0.98 - - - - - - - 0.980 - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
34. WDFY3 10775 0.979 - - - - - - - 0.979 - - WD repeat and FYVE domain containing 3, transcript variant X7
35. LAMTOR2 ENSGALG00000029881 35356 0.977 - - - - - - - 0.977 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:HGNC Symbol;Acc:HGNC:29796]
36. NSUN4 ENSGALG00000010360 3567 0.962 - - - - - - - 0.962 - - NOP2/Sun RNA methyltransferase family member 4 [Source:NCBI gene;Acc:424613]
37. CPSF4 ENSGALG00000004714 14353 0.961 - - - - - - - 0.961 - - cleavage and polyadenylation specific factor 4 [Source:NCBI gene;Acc:416494]
38. C11orf57 C11orf57 4971 0.961 - - - - - - - 0.961 - -
39. SPATA20 ENSGALG00000006857 3506 0.961 - - - - - - - 0.961 - - spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
40. ACTR6 ENSGALG00000040976 31271 0.961 - - - - - - - 0.961 - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
41. BMP4 ENSGALG00000012429 4306 0.956 - - - - - - - 0.956 - - bone morphogenetic protein 4 [Source:NCBI gene;Acc:396165]
42. TIMM23B ENSGALG00000002089 8122 0.953 - - - - - - - 0.953 - - translocase of inner mitochondrial membrane 23 homolog B
43. MCM6 ENSGALG00000012348 12523 0.951 - - - - - - - 0.951 - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
44. CSNK2A1 ENSGALG00000006197 41409 0.948 - - - - - - - 0.948 - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
45. RPL7L1 ENSGALG00000011974 20292 0.942 - - - - - - - 0.942 - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
46. MYBL2 ENSGALG00000003503 15875 0.942 - - - - - - - 0.942 - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
47. MED6 ENSGALG00000029743 9414 0.941 - - - - - - - 0.941 - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
48. FARP1 ENSGALG00000016886 13132 0.937 - - - - - - - 0.937 - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
49. PDCL3 ENSGALG00000016772 14897 0.937 - - - - - - - 0.937 - - phosducin like 3 [Source:NCBI gene;Acc:418709]
50. ZNF367 ENSGALG00000012629 3215 0.936 - - - - - - - 0.936 - - zinc finger protein 367 [Source:HGNC Symbol;Acc:HGNC:18320]
51. DHCR24 ENSGALG00000010798 3963 0.936 - - - - - - - 0.936 - - 24-dehydrocholesterol reductase [Source:NCBI gene;Acc:424661]
52. HSPA12A ENSGALG00000009248 7783 0.929 - - - - - - - 0.929 - - heat shock protein family A (Hsp70) member 12A [Source:HGNC Symbol;Acc:HGNC:19022]
53. THRAP3 ENSGALG00000002144 21958 0.925 - - - - - - - 0.925 - - thyroid hormone receptor associated protein 3 [Source:NCBI gene;Acc:419623]
54. MGST1 ENSGALG00000013098 17632 0.925 - - - - - - - 0.925 - - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
55. LAPTM4A ENSGALG00000016479 15973 0.925 - - - - - - - 0.925 - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
56. DERL1 ENSGALG00000033950 15074 0.908 - - - - - - - 0.908 - - derlin 1 [Source:NCBI gene;Acc:420350]
57. TAF15 ENSGALG00000002060 12320 0.899 - - - - - - - 0.899 - - TATA-box binding protein associated factor 15 [Source:HGNC Symbol;Acc:HGNC:11547]
58. TMEM199 ENSGALG00000023757 10781 0.891 - - - - - - - 0.891 - - transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
59. FBXO9 ENSGALG00000016320 9600 0.875 - - - - - - - 0.875 - - F-box protein 9 [Source:NCBI gene;Acc:421895]
60. ATP6V0B ENSGALG00000010091 14901 0.872 - - - - - - - 0.872 - - ATPase H+ transporting V0 subunit b [Source:NCBI gene;Acc:424575]
61. GLO1 ENSGALG00000010127 31662 0.87 - - - - - - - 0.870 - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
62. CKAP4 ENSGALG00000012659 36398 0.865 - - - - - - - 0.865 - - cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]
63. EIF1 ENSGALG00000028517 124882 0.863 - - - - - - - 0.863 - - eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
64. ANP32E ENSGALG00000039891 35925 0.861 - - - - - - - 0.861 - - acidic nuclear phosphoprotein 32 family member E [Source:NCBI gene;Acc:426109]
65. MAD2L1BP ENSGALG00000027871 7835 0.855 - - - - - - - 0.855 - - MAD2L1 binding protein [Source:HGNC Symbol;Acc:HGNC:21059]
66. GTLF3B GTLF3B 5079 0.854 - - - - - - - 0.854 - -
67. TMEM200B ENSGALG00000024318 117 0.854 - - - - - - - - - 0.854 transmembrane protein 200B [Source:HGNC Symbol;Acc:HGNC:33785]
68. ZEB2 ENSGALG00000040465 315 0.85 - - - - - - - - - 0.850 Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
69. PHF11 ENSGALG00000019094 770 0.849 - - - - - - - - - 0.849 PHD finger protein 11 [Source:HGNC Symbol;Acc:HGNC:17024]
70. RGS7 ENSGALG00000039772 69 0.847 - - - - - 0.847 - - - - regulator of G-protein signaling 7 [Source:NCBI gene;Acc:395620]
71. ZMYND10 ENSGALG00000035883 58 0.845 - - - - - - - - - 0.845 zinc finger MYND-type containing 10 [Source:HGNC Symbol;Acc:HGNC:19412]
72. ARHGEF7 ENSGALG00000031009 10090 0.845 - - - - - - - 0.845 - - Rho guanine nucleotide exchange factor 7 [Source:HGNC Symbol;Acc:HGNC:15607]
73. TNN ENSGALG00000004538 21 0.842 - - - - - - - - - 0.842 tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
74. CLIC3 ENSGALG00000038789 233 0.837 - - - - - - - - - 0.837 chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
75. KAT6B ENSGALG00000005035 301 0.837 - - - - - - - - - 0.837 lysine acetyltransferase 6B [Source:HGNC Symbol;Acc:HGNC:17582]
76. TBX5 ENSGALG00000008253 820 0.836 - - - - - - - - - 0.836 T-box 5 [Source:NCBI gene;Acc:373988]
77. NME6 ENSGALG00000038044 1231 0.833 - - - - - - - - - 0.833 NME/NM23 nucleoside diphosphate kinase 6
78. EIF5 ENSGALG00000011464 62584 0.832 - - - - - - - 0.832 - - eukaryotic translation initiation factor 5 [Source:NCBI gene;Acc:423479]
79. ATP5MC1 ENSGALG00000001330 37766 0.831 - - - - - - - 0.831 - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
80. RBM17 ENSGALG00000006332 12656 0.831 - - - - - - - 0.831 - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
81. UPF2 ENSGALG00000033772 9548 0.831 - - - - - - - 0.831 - - UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
82. ELOVL1 ENSGALG00000009988 4000 0.825 - - - - - - - - - 0.825 ELOVL fatty acid elongase 1 [Source:NCBI gene;Acc:424564]
83. AKAP11 ENSGALG00000022739 82 0.824 - - - - - - - - - 0.824 A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
84. ENSGALG00000021694 ENSGALG00000021694 26011 0.823 - - - - - - - 0.823 - -
85. MVP ENSGALG00000040471 1407 0.822 - - - - - - - - - 0.822 major vault protein [Source:NCBI gene;Acc:420049]
86. OSBPL2 ENSGALG00000005195 94 0.821 - - - - - - - - - 0.821 oxysterol binding protein like 2 [Source:NCBI gene;Acc:419227]
87. PKD2 ENSGALG00000010921 55 0.82 - - - - - - - - - 0.820 polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
88. gga-mir-6544 ENSGALG00000027916 19 0.82 - - - - - - - - - 0.820 gga-mir-6544 [Source:miRBase;Acc:MI0022360]
89. TNFAIP3 ENSGALG00000013861 11 0.82 - - - - - - - - - 0.820 TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]
90. TRAK2 ENSGALG00000008370 46 0.82 - - - - - - - - - 0.820 trafficking kinesin protein 2 [Source:HGNC Symbol;Acc:HGNC:13206]
91. POLR2E ENSGALG00000002591 26405 0.819 - - - - - - - 0.819 - - RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
92. C3orf58 ENSGALG00000002347 27 0.819 - - - - - - - - - 0.819 chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
93. NMBR ENSGALG00000013813 15 0.818 - - - - - - - - - 0.818 neuromedin B receptor [Source:HGNC Symbol;Acc:HGNC:7843]
94. MYCN ENSGALG00000016462 1930 0.818 - - - - - - - - - 0.818 MYCN proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:421948]
95. BOK ENSGALG00000005772 117 0.817 - - - - - - - - - 0.817 BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
96. EMX2 ENSGALG00000009302 2103 0.816 - - - - - - - - 0.816 - empty spiracles homeobox 2 [Source:HGNC Symbol;Acc:HGNC:3341]
97. FAM154B FAM154B 175 0.811 - - - - - - - - - 0.811
98. ERRFI1 ENSGALG00000000535 83 0.811 - - - - - - - - - 0.811 ERBB receptor feedback inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:18185]
99. TRMT61A ENSGALG00000011522 14 0.811 - - - - - - - - - 0.811 tRNA methyltransferase 61A [Source:HGNC Symbol;Acc:HGNC:23790]
100. CD3D ENSGALG00000007418 314 0.809 - - - - - 0.809 - - - - CD3d molecule [Source:NCBI gene;Acc:396518]

There are 160 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA