Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PRRX1

Gene Name Gene ID Reads Annotation
PRRX1 ENSGALG00000003324 4859 paired related homeobox 1 [Source:NCBI gene;Acc:373941]











Genes with expression patterns similar to PRRX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PRRX1 ENSGALG00000003324 4859 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 paired related homeobox 1 [Source:NCBI gene;Acc:373941]
2. MSX2 ENSGALG00000038848 6950 2.301 - - 0.759 - - - - 0.783 0.759 - msh homeobox 2 [Source:NCBI gene;Acc:395245]
3. RSPO2 ENSGALG00000030030 1271 1.593 - 0.783 - - - - - 0.810 - - R-spondin 2 [Source:NCBI gene;Acc:420271]
4. NDNF ENSGALG00000011962 2261 1.592 - - 0.766 - - - - 0.826 - - neuron-derived neurotrophic factor, transcript variant X4
5. MAP3K8 ENSGALG00000007356 188 1.526 - 0.793 - - - - - 0.733 - - mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
6. C1H21ORF33 ENSGALG00000019171 8910 0.999 - - - - - - 0.999 - - - chromosome 1 open reading frame, human C21orf33 [Source:NCBI gene;Acc:418552]
7. PIK3C2B ENSGALG00000037043 4522 0.999 - - - - - - 0.999 - - - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:HGNC Symbol;Acc:HGNC:8972]
8. TUSC3 ENSGALG00000013674 2848 0.999 - - - - - - 0.999 - - - tumor suppressor candidate 3 [Source:HGNC Symbol;Acc:HGNC:30242]
9. MRPS27 ENSGALG00000015002 6541 0.999 - - - - - - 0.999 - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
10. NAP1L4 ENSGALG00000006446 10868 0.999 - - - - - - 0.999 - - - nucleosome assembly protein 1 like 4 [Source:NCBI gene;Acc:423087]
11. THBS4 ENSGALG00000014804 4228 0.999 - - - - - - 0.999 - - - Gallus gallus thrombospondin 4 (THBS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321549]
12. RAP1GDS1 ENSGALG00000012222 10078 0.999 - - - - - - 0.999 - - - rap1 GTPase-GDP dissociation stimulator 1 [Source:NCBI gene;Acc:422701]
13. KIAA0922 4430 0.999 - - - - - - 0.999 - - - KIAA0922, transcript variant X4
14. ECE-1 ECE-1 3057 0.999 - - - - - - 0.999 - - -
15. UTP14A ENSGALG00000024039 8532 0.999 - - - - - - 0.999 - - - UTP14A small subunit processome component
16. MAPKAPK2 ENSGALG00000000883 6174 0.999 - - - - - - 0.999 - - - mitogen-activated protein kinase-activated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:6887]
17. PRRC2B 1997 0.999 - - - - - - 0.999 - - - proline rich coiled-coil 2B, transcript variant X12
18. TDP2 ENSGALG00000013637 6595 0.999 - - - - - - 0.999 - - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
19. GBX-1 GBX-1 1430 0.999 - - - - - - 0.999 - - -
20. HSPA14 ENSGALG00000035201 7372 0.999 - - - - - - 0.999 - - - heat shock protein family A (Hsp70) member 14
21. WDYHV1 ENSGALG00000030059 2961 0.999 - - - - - - 0.999 - - - WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
22. ENSGALG00000001861 ENSGALG00000001861 10150 0.998 - - - - - - 0.998 - - -
23. ARCN1 ENSGALG00000007430 21499 0.998 - - - - - - 0.998 - - - archain 1 [Source:NCBI gene;Acc:770561]
24. DNMT3B ENSGALG00000041461 12959 0.997 - - - - - - 0.997 - - - DNA methyltransferase 3 beta [Source:NCBI gene;Acc:419287]
25. AP2M1 ENSGALG00000008432 16249 0.996 - - - - - - 0.996 - - - adaptor related protein complex 2 mu 1 subunit [Source:NCBI gene;Acc:770246]
26. DHX36 ENSGALG00000043082 17619 0.996 - - - - - - 0.996 - - - DEAH-box helicase 36 [Source:HGNC Symbol;Acc:HGNC:14410]
27. EEF1E1 ENSGALG00000012781 22615 0.996 - - - - - - 0.996 - - - eukaryotic translation elongation factor 1 epsilon 1
28. AURKAIP1 ENSGALG00000001555 14715 0.995 - - - - - - 0.995 - - - aurora kinase A interacting protein 1 [Source:NCBI gene;Acc:419415]
29. ENSGALG00000021694 ENSGALG00000021694 26011 0.995 - - - - - - 0.995 - - -
30. CHMP4B ENSGALG00000002095 17422 0.993 - - - - - - 0.993 - - - charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
31. KIF2A ENSGALG00000014737 16391 0.992 - - - - - - 0.992 - - - kinesin heavy chain member 2A [Source:NCBI gene;Acc:427156]
32. BRT-1 BRT-1 26083 0.992 - - - - - - 0.992 - - -
33. gga-mir-762 ENSGALG00000025437 24823 0.99 - - - - - - 0.990 - - - gga-mir-762 [Source:miRBase;Acc:MI0008209]
34. CWC15 ENSGALG00000017207 30922 0.986 - - - - - - 0.986 - - - CWC15 spliceosome associated protein homolog [Source:NCBI gene;Acc:418996]
35. UBE2C ENSGALG00000026380 27639 0.986 - - - - - - 0.986 - - - ubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]
36. RPL39 ENSGALG00000008620 63315 0.983 - - - - - - 0.983 - - - ribosomal protein L39 [Source:NCBI gene;Acc:374132]
37. ATF4 ENSGALG00000012135 53361 0.982 - - - - - - 0.982 - - - activating transcription factor 4 [Source:NCBI gene;Acc:395693]
38. MTX2 ENSGALG00000009264 17304 0.981 - - - - - - 0.981 - - - metaxin 2 [Source:HGNC Symbol;Acc:HGNC:7506]
39. PSMA7 ENSGALG00000030411 42436 0.979 - - - - - - 0.979 - - - proteasome subunit alpha 7 [Source:NCBI gene;Acc:395318]
40. DYNLRB1 ENSGALG00000034509 28361 0.978 - - - - - - 0.978 - - - dynein light chain roadblock-type 1
41. TRA2B ENSGALG00000006531 40566 0.975 - - - - - - 0.975 - - - transformer 2 beta homolog (Drosophila) [Source:NCBI gene;Acc:395403]
42. CBX3 ENSGALG00000011038 40977 0.969 - - - - - - 0.969 - - - chromobox 3 [Source:NCBI gene;Acc:395355]
43. RPL19 ENSGALG00000001658 277294 0.91 - - - - - - 0.910 - - - ribosomal protein L19 [Source:NCBI gene;Acc:420003]
44. GALNT7 ENSGALG00000010744 8645 0.885 - - 0.885 - - - - - - - polypeptide N-acetylgalactosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4129]
45. ANP32B ENSGALG00000037483 190705 0.873 - - - - - - 0.873 - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
46. NSA2 ENSGALG00000014942 45193 0.865 - - - - - - 0.865 - - - NSA2, ribosome biogenesis homolog [Source:NCBI gene;Acc:427206]
47. NUCKS1 ENSGALG00000000708 80882 0.864 - - - - - - 0.864 - - - nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]
48. AHCY ENSGALG00000033677 35555 0.863 - - - - - - 0.863 - - - adenosylhomocysteinase [Source:HGNC Symbol;Acc:HGNC:343]
49. FN1 ENSGALG00000003578 37024 0.861 - - - - - - 0.861 - - - fibronectin 1 [Source:NCBI gene;Acc:396133]
50. EN1 ENSGALG00000042389 3051 0.861 - - - - - - - 0.861 - - engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]
51. CYP26A1 ENSGALG00000033695 2646 0.855 - - - - - - - 0.855 - - cytochrome P450 family 26 subfamily A member 1 [Source:NCBI gene;Acc:408183]
52. ERBB2 ENSGALG00000031529 313 0.849 - - - - - - - - 0.849 - erb-b2 receptor tyrosine kinase 2 [Source:NCBI gene;Acc:426130]
53. APOA1 ENSGALG00000007114 10215 0.848 - - 0.848 - - - - - - - apolipoprotein A1 [Source:NCBI gene;Acc:396536]
54. NRSN1 ENSGALG00000037811 11424 0.833 - - 0.833 - - - - - - - neurensin 1 [Source:HGNC Symbol;Acc:HGNC:17881]
55. C1QTNF3 ENSGALG00000027887 8646 0.83 - - - - - - 0.830 - - - C1q and tumor necrosis factor related protein 3, transcript variant X1
56. SLC37A3 ENSGALG00000012849 836 0.83 - - - - - - - - 0.830 - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
57. DISP1 3281 0.827 - - 0.827 - - - - - - - dispatched RND transporter family member 1, transcript variant X3
58. BAMBI ENSGALG00000040993 7562 0.826 - 0.826 - - - - - - - - BMP and activin membrane bound inhibitor [Source:NCBI gene;Acc:428413]
59. DEPDC6 ENSGALG00000043787 511 0.825 - - - - - - - 0.825 - - DEP domain containing 6 [Source:NCBI gene;Acc:420357]
60. TJP1 ENSGALG00000042552 3081 0.821 - - 0.821 - - - - - - - tight junction protein 1 [Source:HGNC Symbol;Acc:HGNC:11827]
61. YTHDF2 ENSGALG00000034831 15118 0.816 - - - - - - 0.816 - - - YTH N6-methyladenosine RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:31675]
62. SIAH1 ENSGALG00000003916 6682 0.816 - - - - - - 0.816 - - - siah E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:10857]
63. BAALC ENSGALG00000045617 850 0.815 - - - - - - - 0.815 - - BAALC, MAP3K1 and KLF4 binding [Source:HGNC Symbol;Acc:HGNC:14333]
64. BRAP ENSGALG00000004650 555 0.807 - - - - - - - - 0.807 - BRCA1 associated protein [Source:NCBI gene;Acc:772041]
65. DLX5 ENSGALG00000009129 1395 0.807 - - - - - - - 0.807 - - distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
66. TBX18 ENSGALG00000032789 1768 0.806 - - - - - - - 0.806 - - T-box 18 [Source:NCBI gene;Acc:395104]
67. C3H6ORF154 C3H6ORF154 1078 0.806 - - - - - - - - 0.806 -
68. NPHP1 ENSGALG00000008195 1465 0.805 - - - - - - - - 0.805 - nephrocystin 1 [Source:NCBI gene;Acc:421223]
69. SERINC2 ENSGALG00000021685 1581 0.805 - - - - - - - - 0.805 - serine incorporator 2 [Source:NCBI gene;Acc:419558]
70. WNT6 ENSGALG00000011358 1886 0.801 - - - - - - - 0.801 - - Wnt family member 6 [Source:NCBI gene;Acc:395235]
71. TMEM269 ENSGALG00000025800 143 0.801 - - - - - - - - 0.801 - transmembrane protein 269 [Source:HGNC Symbol;Acc:HGNC:52381]
72. PRRX2 ENSGALG00000028236 1990 0.8 - - 0.800 - - - - - - - paired related homeobox 2 [Source:NCBI gene;Acc:396314]
73. MSC ENSGALG00000037777 1109 0.796 - - - - - 0.796 - - - - musculin [Source:HGNC Symbol;Acc:HGNC:7321]
74. BOC ENSGALG00000015152 4868 0.796 - - 0.796 - - - - - - - BOC cell adhesion associated, oncogene regulated [Source:HGNC Symbol;Acc:HGNC:17173]
75. LHCGR ENSGALG00000009095 174 0.795 - - - - - - - - 0.795 - luteinizing hormone/choriogonadotropin receptor [Source:NCBI gene;Acc:395776]
76. CXCR4 ENSGALG00000012357 1320 0.793 - - - - - - - 0.793 - - C-X-C motif chemokine receptor 4 [Source:NCBI gene;Acc:395324]
77. ALMS1 ENSGALG00000044620 570 0.792 - - - - - - - - 0.792 - ALMS1, centrosome and basal body associated protein, transcript variant X1
78. CEP112 ENSGALG00000034989 123 0.791 - - - - - - - - 0.791 - centrosomal protein 112 [Source:NCBI gene;Acc:101749632]
79. LGALS3 ENSGALG00000012173 3306 0.791 - 0.791 - - - - - - - - galectin 3 [Source:NCBI gene;Acc:373917]
80. DCP1B 1306 0.79 - - - - - - - - 0.790 - decapping mRNA 1B
81. GHOX-7 GHOX-7 2555 0.789 - - - - - - - 0.789 - -
82. AAMP ENSGALG00000011445 2528 0.786 - - - - - - - - 0.786 - angio associated migratory cell protein [Source:NCBI gene;Acc:769880]
83. ADAM12 ENSGALG00000041255 796 0.785 - - 0.785 - - - - - - - ADAM metallopeptidase domain 12 [Source:NCBI gene;Acc:425843]
84. FGD5 ENSGALG00000008546 4031 0.781 - - - - - - - - 0.781 - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
85. KIAA1217 ENSGALG00000007766 144 0.78 - - - - - - - - 0.780 - KIAA1217 [Source:HGNC Symbol;Acc:HGNC:25428]
86. PDZRN4 ENSGALG00000009530 832 0.779 - - - - - - - - 0.779 - PDZ domain containing ring finger 4 [Source:HGNC Symbol;Acc:HGNC:30552]
87. PROK2 ENSGALG00000007785 55 0.779 - - - - - 0.779 - - - - prokineticin 2 [Source:HGNC Symbol;Acc:HGNC:18455]
88. RBBP8 ENSGALG00000014982 3255 0.778 - - - - - - - - 0.778 - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
89. NDP ENSGALG00000016222 1067 0.777 - 0.777 - - - - - - - - NDP, norrin cystine knot growth factor [Source:NCBI gene;Acc:418560]
90. CHD2 ENSGALG00000006949 1076 0.774 - - - - - - - - 0.774 - chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:415507]
91. PPARD ENSGALG00000002588 962 0.773 - - - - - - - - 0.773 - peroxisome proliferator activated receptor delta [Source:NCBI gene;Acc:395479]
92. LSAMP ENSGALG00000040620 2226 0.773 - - - - - - - 0.773 - - limbic system-associated membrane protein [Source:NCBI gene;Acc:395687]
93. PRDM15 ENSGALG00000019178 2729 0.773 - - - - - - - - 0.773 - PR/SET domain 15 [Source:HGNC Symbol;Acc:HGNC:13999]
94. MECOM ENSGALG00000032577 5062 0.772 - - - - - - - 0.772 - - MDS1 and EVI1 complex locus [Source:HGNC Symbol;Acc:HGNC:3498]
95. CEP250 ENSGALG00000026151 163 0.771 - - - - - - - - 0.771 - centrosomal protein 250 [Source:HGNC Symbol;Acc:HGNC:1859]
96. ZDHHC7 ENSGALG00000042522 1774 0.771 - - - - - - - - 0.771 - zinc finger DHHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:18459]
97. ENSGALG00000027002 ENSGALG00000027002 7570 0.771 - - - - - - - 0.771 - -
98. ZEB2 ENSGALG00000040465 315 0.771 - - - - - - - - 0.771 - Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
99. RAD17 ENSGALG00000015571 1374 0.77 - - - - - - - - 0.770 - RAD17 checkpoint clamp loader component [Source:NCBI gene;Acc:404778]
100. ABCC8 ENSGALG00000006172 41 0.767 - - - - - - - - 0.767 - ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]

There are 168 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA