Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PRPF8

Gene Name Gene ID Reads Annotation
PRPF8 ENSGALG00000002943 31189 pre-mRNA processing factor 8 [Source:HGNC Symbol;Acc:HGNC:17340]











Genes with expression patterns similar to PRPF8

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PRPF8 ENSGALG00000002943 31189 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - pre-mRNA processing factor 8 [Source:HGNC Symbol;Acc:HGNC:17340]
2. RCC2 ENSGALG00000031684 28067 1.571 - - - - 0.746 - 0.825 - - - regulator of chromosome condensation 2 [Source:HGNC Symbol;Acc:HGNC:30297]
3. NDUFAB1 ENSGALG00000006073 40467 1.503 - - - - 0.728 - 0.775 - - - NADH:ubiquinone oxidoreductase subunit AB1 [Source:HGNC Symbol;Acc:HGNC:7694]
4. PSMA6 ENSGALG00000010060 26517 1.485 - - - - - - 0.755 0.730 - - proteasome subunit alpha 6 [Source:NCBI gene;Acc:423326]
5. RPL36AL ENSGALG00000004952 205590 0.929 - - - - - - 0.929 - - - ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
6. RPL12 ENSGALG00000008806 229862 0.924 - - - - - - 0.924 - - - ribosomal protein L12 [Source:NCBI gene;Acc:417264]
7. RBMX ENSGALG00000006457 34009 0.883 - - - - - - 0.883 - - - RNA binding motif protein X-linked [Source:NCBI gene;Acc:422248]
8. HN1 HN1 34386 0.872 - - - - - - 0.872 - - -
9. RPS3A ENSGALG00000010077 292185 0.871 - - - - - - 0.871 - - - ribosomal protein S3A [Source:NCBI gene;Acc:422477]
10. IGF2BP3 ENSGALG00000010961 81524 0.858 - - - - - - 0.858 - - - insulin like growth factor 2 mRNA binding protein 3 [Source:NCBI gene;Acc:420617]
11. COPS4 ENSGALG00000011130 21515 0.854 - - - - - - 0.854 - - - COP9 signalosome subunit 4 [Source:NCBI gene;Acc:422594]
12. COX7C ENSGALG00000027963 84312 0.847 - - - - - - 0.847 - - - cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
13. ACO2 ENSGALG00000011950 30387 0.834 - - - - - - 0.834 - - - aconitase 2 [Source:NCBI gene;Acc:374009]
14. TOP2B ENSGALG00000011300 25048 0.831 - - - - - - 0.831 - - - DNA topoisomerase 2-beta [Source:NCBI gene;Acc:395966]
15. PSMC2 ENSGALG00000008236 25980 0.831 - - - - - - 0.831 - - - proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
16. PEBP1 ENSGALG00000007403 77502 0.829 - - - - - - 0.829 - - - phosphatidylethanolamine binding protein 1 [Source:NCBI gene;Acc:416990]
17. DKC1 ENSGALG00000005054 30350 0.825 - - - - - - 0.825 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
18. HMGB2 ENSGALG00000010745 89235 0.824 - - - - - - 0.824 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
19. PDIA6 ENSGALG00000016447 51308 0.809 - - - - - - 0.809 - - - protein disulfide isomerase family A member 6 [Source:HGNC Symbol;Acc:HGNC:30168]
20. MRPL20 ENSGALG00000001542 28764 0.809 - - - - - - 0.809 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
21. PSMB3 ENSGALG00000001597 22588 0.808 - - - - - - 0.808 - - - proteasome subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]
22. SSBP1 ENSGALG00000012876 34256 0.807 - - - - - - 0.807 - - - single stranded DNA binding protein 1 [Source:NCBI gene;Acc:418122]
23. EIF2S1 ENSGALG00000009565 63906 0.806 - - - - - - 0.806 - - - eukaryotic translation initiation factor 2 subunit alpha [Source:NCBI gene;Acc:423279]
24. NDUFS6 ENSGALG00000013191 15874 0.805 - - - - - - 0.805 - - - NADH:ubiquinone oxidoreductase subunit S6 [Source:HGNC Symbol;Acc:HGNC:7713]
25. PPIB ENSGALG00000002210 46778 0.804 - - - - - - 0.804 - - - peptidylprolyl isomerase B (cyclophilin B) [Source:NCBI gene;Acc:396447]
26. CNOT7 ENSGALG00000013649 23435 0.796 - - - - - - 0.796 - - - CCR4-NOT transcription complex subunit 7 [Source:NCBI gene;Acc:422733]
27. SIKE1 ENSGALG00000002147 20836 0.793 - - - - - - 0.793 - - - suppressor of IKBKE 1 [Source:NCBI gene;Acc:419887]
28. PTBP1 ENSGALG00000001962 66983 0.792 - - - - - - 0.792 - - - polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:420098]
29. STK4 ENSGALG00000004098 11366 0.792 - - - - - - 0.792 - - - serine/threonine kinase 4 [Source:NCBI gene;Acc:419187]
30. PRMT3 ENSGALG00000003958 14160 0.791 - - - - - - 0.791 - - - protein arginine methyltransferase 3 [Source:NCBI gene;Acc:422975]
31. UBR7 ENSGALG00000010842 16488 0.791 - - - - - - 0.791 - - - Gallus gallus ubiquitin protein ligase E3 component n-recognin 7 (putative) (UBR7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318461]
32. PPP1R7 ENSGALG00000031766 22187 0.791 - - - - - - 0.791 - - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
33. PSMB4 ENSGALG00000000905 46735 0.79 - - - - - - 0.790 - - - proteasome subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:9541]
34. FAM96B 14435 0.79 - - - - - - 0.790 - - - family with sequence similarity 96 member B
35. NDUFB10 ENSGALG00000005465 41984 0.789 - - - - - - 0.789 - - - NADH:ubiquinone oxidoreductase subunit B10 [Source:HGNC Symbol;Acc:HGNC:7696]
36. SMC4 ENSGALG00000009553 15715 0.788 - - - - - - 0.788 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
37. EWSR1 ENSGALG00000008149 13014 0.787 - - - - - - 0.787 - - - EWS RNA binding protein 1 [Source:NCBI gene;Acc:417022]
38. PTP4A2 ENSGALG00000003265 24826 0.787 - - - - - - 0.787 - - - protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:HGNC:9635]
39. PARP1 ENSGALG00000009228 39433 0.787 - - - - - - 0.787 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
40. RPL21 ENSGALG00000027035 244232 0.786 - - - - - - 0.786 - - - ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
41. SEC11A ENSGALG00000037553 32123 0.786 - - - - - - 0.786 - - - SEC11 homolog A, signal peptidase complex subunit [Source:NCBI gene;Acc:415334]
42. TTYH2 ENSGALG00000026940 15628 0.783 - - - - - - 0.783 - - - tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
43. TALDO1 ENSGALG00000037195 30673 0.783 - - - - - - 0.783 - - - transaldolase 1 [Source:NCBI gene;Acc:423019]
44. GLO1 ENSGALG00000010127 31662 0.78 - - - - - - 0.780 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
45. YWHAZ ENSGALG00000031387 84985 0.779 - - - - - - 0.779 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
46. MGST1 ENSGALG00000013098 17632 0.777 - - - - - - 0.777 - - - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
47. NUTF2 ENSGALG00000001602 32832 0.774 - - - - - - 0.774 - - - nuclear transport factor 2 [Source:NCBI gene;Acc:415655]
48. MORF4L1 ENSGALG00000008146 29940 0.773 - - - - - - 0.773 - - - mortality factor 4 like 1 [Source:NCBI gene;Acc:554283]
49. ENSGALG00000007509 ENSGALG00000007509 18441 0.772 - - - - - - 0.772 - - -
50. EIF4A2 ENSGALG00000008684 58507 0.772 - - - - - - 0.772 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
51. THRAP3 ENSGALG00000002144 21958 0.772 - - - - - - 0.772 - - - thyroid hormone receptor associated protein 3 [Source:NCBI gene;Acc:419623]
52. ENSGALG00000006463 ENSGALG00000006463 45151 0.772 - - - - - - 0.772 - - -
53. TXNDC17 ENSGALG00000027950 45004 0.77 - - - - - - 0.770 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
54. MAGOH 28688 0.77 - - - - - - 0.770 - - - mago homolog, exon junction complex core component
55. AZIN1 ENSGALG00000029295 11085 0.769 - - - - - - 0.769 - - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
56. STX2 ENSGALG00000002536 10438 0.768 - - - - - - 0.768 - - - syntaxin 2 [Source:NCBI gene;Acc:378895]
57. MRPL3 ENSGALG00000040873 21053 0.768 - - - - - - - 0.768 - - mitochondrial ribosomal protein L3 [Source:NCBI gene;Acc:420686]
58. MRPL19 ENSGALG00000016731 22670 0.766 - - - - - - 0.766 - - - mitochondrial ribosomal protein L19, transcript variant X1
59. DUT ENSGALG00000038032 34659 0.765 - - - - - - 0.765 - - - deoxyuridine triphosphatase [Source:NCBI gene;Acc:769338]
60. RBBP4 ENSGALG00000003522 72455 0.765 - - - - - - 0.765 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
61. PCNP ENSGALG00000015330 15750 0.764 - - - - - - 0.764 - - - PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
62. ENSGALG00000009044 ENSGALG00000009044 14492 0.764 - - - - - - 0.764 - - -
63. ZNF593 ENSGALG00000000542 79105 0.762 - - - - - - 0.762 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
64. RAD21 ENSGALG00000029523 25658 0.762 - - - - - - 0.762 - - - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
65. TUBB2C TUBB2C 44249 0.762 - - - - - - 0.762 - - -
66. TPMT ENSGALG00000012687 9537 0.761 - - - - - - 0.761 - - - thiopurine S-methyltransferase [Source:HGNC Symbol;Acc:HGNC:12014]
67. MRPL54 ENSGALG00000027611 39450 0.759 - - - - - - 0.759 - - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
68. PPIH ENSGALG00000004874 25558 0.759 - - - - - - 0.759 - - - peptidylprolyl isomerase H [Source:NCBI gene;Acc:419507]
69. RRM2 ENSGALG00000016442 40375 0.758 - - - - - - 0.758 - - - ribonucleotide reductase regulatory subunit M2
70. MRPL50 ENSGALG00000015543 11649 0.758 - - - - - - 0.758 - - - mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
71. LUC7L2 ENSGALG00000036238 11817 0.758 - - - - - - 0.758 - - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
72. PSMB1 ENSGALG00000011174 40689 0.756 - - - - - - 0.756 - - - proteasome subunit beta 1 [Source:NCBI gene;Acc:421551]
73. SSR3 ENSGALG00000028683 24334 0.756 - - - - - - 0.756 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
74. PDIA4 ENSGALG00000043006 22992 0.756 - - - - - - 0.756 - - - protein disulfide isomerase family A member 4 [Source:NCBI gene;Acc:420785]
75. PSMD3 ENSGALG00000033162 25615 0.756 - - - - - - 0.756 - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
76. SNRNP40 ENSGALG00000000615 32298 0.756 - - - - - - 0.756 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
77. MCM4 ENSGALG00000012915 13151 0.755 - - - - - - 0.755 - - - minichromosome maintenance complex component 4
78. KPNA3 ENSGALG00000017009 17330 0.755 - - - - - - 0.755 - - - karyopherin subunit alpha 3 [Source:NCBI gene;Acc:418870]
79. VMP1 ENSGALG00000005160 12859 0.755 - - - - - - 0.755 - - - vacuole membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:29559]
80. DNAJC9 ENSGALG00000002701 19249 0.755 - - - - - - 0.755 - - - DnaJ heat shock protein family (Hsp40) member C9 [Source:NCBI gene;Acc:423640]
81. EIF3B ENSGALG00000040999 49971 0.754 - - - - - - 0.754 - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
82. AIRC AIRC 15851 0.754 - - - - - - 0.754 - - -
83. FKBP12 FKBP12 64317 0.754 - - - - - - 0.754 - - -
84. HNRNPDL ENSGALG00000023199 112033 0.754 - - - - - - 0.754 - - - heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
85. CSE1L ENSGALG00000004707 20653 0.753 - - - - - - 0.753 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
86. CTBP1 ENSGALG00000039942 9383 0.753 - - - - - - 0.753 - - - C-terminal binding protein 1 [Source:NCBI gene;Acc:422904]
87. PRELID1 ENSGALG00000002990 55592 0.752 - - - - - - 0.752 - - - PRELI domain containing 1 [Source:NCBI gene;Acc:395819]
88. DEK ENSGALG00000012684 14179 0.752 - - - - - - 0.752 - - - DEK proto-oncogene [Source:NCBI gene;Acc:420828]
89. CLNS1A ENSGALG00000008574 25675 0.752 - - - - - - 0.752 - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
90. KIF2C ENSGALG00000010120 8999 0.752 - - - - - - 0.752 - - - kinesin family member 2C, transcript variant X1
91. SAR1A ENSGALG00000004431 28833 0.752 - - - - - - 0.752 - - - secretion associated Ras related GTPase 1A [Source:HGNC Symbol;Acc:HGNC:10534]
92. ID2 ENSGALG00000035016 22120 0.752 - - - - - - 0.752 - - - inhibitor of DNA binding 2, HLH protein [Source:NCBI gene;Acc:395852]
93. SOD1 ENSGALG00000015844 35836 0.751 - - - - - - 0.751 - - - superoxide dismutase 1, soluble [Source:NCBI gene;Acc:395938]
94. TMEM199 ENSGALG00000023757 10781 0.751 - - - - - - 0.751 - - - transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
95. GABPA ENSGALG00000015763 11567 0.751 - - - - - - 0.751 - - - GA binding protein transcription factor subunit alpha [Source:NCBI gene;Acc:418478]
96. GLRX3 ENSGALG00000010464 22578 0.751 - - - - - - 0.751 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
97. SLC25A3 ENSGALG00000011514 62606 0.75 - - - - - - 0.750 - - - solute carrier family 25 member 3 [Source:NCBI gene;Acc:417924]
98. BRD7 ENSGALG00000003786 26858 0.75 - - - - - - 0.750 - - - bromodomain containing 7 [Source:NCBI gene;Acc:415730]
99. SMARCA5 ENSGALG00000009913 20059 0.749 - - - - - - 0.749 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:HGNC:11101]
100. LLPH ENSGALG00000019358 20976 0.749 - - - - - - 0.749 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]

There are 206 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA