Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PRPF6

Gene Name Gene ID Reads Annotation
PRPF6 ENSGALG00000006001 8572 pre-mRNA processing factor 6 [Source:HGNC Symbol;Acc:HGNC:15860]











Genes with expression patterns similar to PRPF6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PRPF6 ENSGALG00000006001 8572 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pre-mRNA processing factor 6 [Source:HGNC Symbol;Acc:HGNC:15860]
2. ARHGAP19 ENSGALG00000007609 3655 2.275 - - - - - - 0.764 0.777 - 0.734 Rho GTPase activating protein 19 [Source:NCBI gene;Acc:423846]
3. C1orf198 ENSGALG00000026600 5651 1.558 - - - - - - 0.798 0.760 - - chromosome 1 open reading frame 198 [Source:HGNC Symbol;Acc:HGNC:25900]
4. HSCB ENSGALG00000005706 12953 1.55 - - - - - - 0.783 0.767 - - HscB mitochondrial iron-sulfur cluster cochaperone [Source:HGNC Symbol;Acc:HGNC:28913]
5. PSMD10 ENSGALG00000008287 11380 1.543 - - - - - - 0.730 0.813 - - proteasome 26S subunit, non-ATPase 10 [Source:NCBI gene;Acc:422351]
6. PEX10 ENSGALG00000001223 5704 1.52 - - - - - - 0.777 0.743 - - peroxisomal biogenesis factor 10 [Source:NCBI gene;Acc:419396]
7. COQ6 ENSGALG00000010197 3283 1.515 - - - - - - - 0.752 - 0.763 coenzyme Q6, monooxygenase [Source:HGNC Symbol;Acc:HGNC:20233]
8. TMEM39B ENSGALG00000003287 4125 1.497 - - - - - - 0.724 0.773 - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
9. COIL ENSGALG00000003158 7806 1.496 - - - - - - 0.724 0.772 - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
10. RIT1 ENSGALG00000014647 7174 1.492 - - - - - - 0.734 0.758 - - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
11. DSCR3 3583 1.466 - - - - - - - 0.742 - 0.724 DSCR3 arrestin fold containing, transcript variant X1
12. UBE3C ENSGALG00000006461 57 1.464 - - - - - 0.749 - - - 0.715 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
13. TIMM13 ENSGALG00000028937 32013 1.462 - - - - - - - 0.759 - 0.703 translocase of inner mitochondrial membrane 13 [Source:NCBI gene;Acc:100859352]
14. AXIN1 ENSGALG00000029402 2802 1.436 - - - - - - 0.727 0.709 - - axin 1 [Source:NCBI gene;Acc:395786]
15. WWC1 ENSGALG00000001826 4666 1.432 - - - - - - - 0.729 - 0.703 WW and C2 domain containing 1 [Source:NCBI gene;Acc:416167]
16. AZIN1 ENSGALG00000029295 11085 1.432 - - - - - - 0.708 0.724 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
17. SDF2L1 ENSGALG00000031982 6084 1.43 - - - - - - 0.730 0.700 - - stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
18. RAE1 ENSGALG00000007653 8930 0.893 - - - - - - 0.893 - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
19. COPA ENSGALG00000009153 11618 0.874 - - - - - - 0.874 - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
20. APLP2 ENSGALG00000001250 22253 0.863 - - - - - - 0.863 - - - amyloid beta precursor like protein 2 [Source:NCBI gene;Acc:419727]
21. RRP36 ENSGALG00000028056 7560 0.859 - - - - - - - 0.859 - - ribosomal RNA processing 36
22. ZCCHC6 ENSGALG00000012607 3655 0.859 - - - - - - 0.859 - - - zinc finger CCHC-type containing 6 [Source:NCBI gene;Acc:100857368]
23. PCBP4 ENSGALG00000027695 7937 0.858 - - - - - - - 0.858 - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
24. RANBP9 ENSGALG00000012696 4871 0.854 - - - - - - - 0.854 - - RAN binding protein 9 [Source:HGNC Symbol;Acc:HGNC:13727]
25. FBXW11 ENSGALG00000002229 5805 0.852 - - - - - - 0.852 - - - F-box and WD repeat domain containing 11 [Source:NCBI gene;Acc:416181]
26. DNM1L ENSGALG00000012929 6174 0.851 - - - - - - - 0.851 - - dynamin 1 like [Source:NCBI gene;Acc:418132]
27. APITD1 APITD1 11830 0.846 - - - - - - - 0.846 - -
28. HIF1A ENSGALG00000011870 9768 0.844 - - - - - - 0.844 - - - hypoxia inducible factor 1 subunit alpha [Source:NCBI gene;Acc:374177]
29. DCPS ENSGALG00000031143 10191 0.841 - - - - - - - 0.841 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
30. NAA35 ENSGALG00000012598 6409 0.841 - - - - - - 0.841 - - - N(alpha)-acetyltransferase 35, NatC auxiliary subunit [Source:NCBI gene;Acc:427461]
31. NDUFS5 ENSGALG00000003625 27698 0.84 - - - - - - - 0.840 - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
32. ATAD2 ENSGALG00000034348 4440 0.839 - - - - - - 0.839 - - - ATPase family, AAA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30123]
33. SCHIP1 ENSGALG00000039468 5912 0.836 - - - - - - 0.836 - - - schwannomin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:15678]
34. RPE ENSGALG00000002847 7644 0.832 - - - - - - - 0.832 - - ribulose-5-phosphate-3-epimerase, transcript variant X2
35. ARF6 ENSGALG00000026944 22014 0.832 - - - - - - 0.832 - - - ADP ribosylation factor 6 [Source:NCBI gene;Acc:428927]
36. PAM16 9684 0.831 - - - - - - 0.831 - - - presequence translocase associated motor 16 homolog, transcript variant X2
37. WSB2 ENSGALG00000008151 13246 0.831 - - - - - - - 0.831 - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
38. NET1 ENSGALG00000008437 9850 0.829 - - - - - - - - - 0.829 neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
39. SCFD1 ENSGALG00000009916 5756 0.829 - - - - - - 0.829 - - - sec1 family domain containing 1 [Source:NCBI gene;Acc:423307]
40. CHCHD1 ENSGALG00000028809 9955 0.828 - - - - - - 0.828 - - - coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23518]
41. APRT ENSGALG00000031000 7535 0.823 - - - - - - 0.823 - - - adenine phosphoribosyltransferase [Source:NCBI gene;Acc:100857155]
42. PSMD13 ENSGALG00000043684 14720 0.823 - - - - - - - 0.823 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
43. XPO1 ENSGALG00000029476 9526 0.822 - - - - - - 0.822 - - - exportin 1 [Source:NCBI gene;Acc:421192]
44. URM1 ENSGALG00000004971 17880 0.821 - - - - - - - 0.821 - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
45. UBR5 ENSGALG00000031282 12143 0.82 - - - - - - 0.820 - - - ubiquitin protein ligase E3 component n-recognin 5 [Source:HGNC Symbol;Acc:HGNC:16806]
46. MOB3A ENSGALG00000031729 9690 0.818 - - - - - - - 0.818 - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
47. TFDP2 ENSGALG00000025759 13407 0.818 - - - - - - - 0.818 - - transcription factor Dp-2 [Source:NCBI gene;Acc:424780]
48. VPS26A ENSGALG00000004174 9198 0.817 - - - - - - 0.817 - - - VPS26, retromer complex component A [Source:HGNC Symbol;Acc:HGNC:12711]
49. FAM207A ENSGALG00000007513 8748 0.817 - - - - - - - 0.817 - - family with sequence similarity 207 member A [Source:HGNC Symbol;Acc:HGNC:15811]
50. HARS ENSGALG00000035080 11602 0.816 - - - - - - - 0.816 - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
51. COL18A1 ENSGALG00000038311 11934 0.815 - - - - - - - 0.815 - - collagen type XVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2195]
52. EBAG9 ENSGALG00000036293 10058 0.811 - - - - - - - 0.811 - - estrogen receptor binding site associated, antigen, 9 [Source:NCBI gene;Acc:420276]
53. SH2D3C ENSGALG00000005036 5101 0.811 - - - - - - - 0.811 - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
54. VPS36 ENSGALG00000017026 3658 0.81 - - - - - - 0.810 - - - vacuolar protein sorting 36 homolog [Source:HGNC Symbol;Acc:HGNC:20312]
55. TIMM8A ENSGALG00000004963 14263 0.809 - - - - - - - 0.809 - - translocase of inner mitochondrial membrane 8A [Source:NCBI gene;Acc:422190]
56. PNRC2 ENSGALG00000004122 19228 0.809 - - - - - - 0.809 - - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
57. ENSGALG00000007514 ENSGALG00000007514 4866 0.809 - - - - - - - 0.809 - -
58. OAT ENSGALG00000031158 10249 0.807 - - - - - - 0.807 - - - ornithine aminotransferase [Source:NCBI gene;Acc:426430]
59. RNF11 ENSGALG00000010539 8617 0.807 - - - - - - - 0.807 - - ring finger protein 11 [Source:NCBI gene;Acc:424631]
60. TRAPPC6B ENSGALG00000010157 7567 0.806 - - - - - - - 0.806 - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
61. PUF60 ENSGALG00000039901 26902 0.803 - - - - - - - 0.803 - - poly(U) binding splicing factor 60 [Source:NCBI gene;Acc:426402]
62. MRPL22 ENSGALG00000003919 2760 0.803 - - - - - 0.803 - - - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
63. TFDP1 ENSGALG00000016823 17019 0.802 - - - - - - 0.802 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
64. MAU2 ENSGALG00000002969 10604 0.802 - - - - - - - 0.802 - - MAU2 sister chromatid cohesion factor [Source:HGNC Symbol;Acc:HGNC:29140]
65. PAPSS1 ENSGALG00000010542 5631 0.801 - - - - - - - 0.801 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]
66. PBRM1 ENSGALG00000037455 6450 0.801 - - - - - - - 0.801 - - polybromo 1 [Source:NCBI gene;Acc:396074]
67. PPFIA1 ENSGALG00000035774 5258 0.799 - - - - - - - 0.799 - - PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
68. UPF3B ENSGALG00000008618 12350 0.799 - - - - - - 0.799 - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
69. PDZD11 ENSGALG00000004198 11484 0.798 - - - - - - 0.798 - - - PDZ domain containing 11 [Source:NCBI gene;Acc:422153]
70. RMI1 ENSGALG00000012592 3750 0.798 - - - - - - - 0.798 - - RecQ mediated genome instability 1 [Source:NCBI gene;Acc:431669]
71. HIC1 ENSGALG00000042077 5827 0.797 - - - - - - - - - 0.797 HIC ZBTB transcriptional repressor 1 [Source:NCBI gene;Acc:396164]
72. GPS1 ENSGALG00000002827 8433 0.797 - - - - - - 0.797 - - - G protein pathway suppressor 1 [Source:NCBI gene;Acc:417382]
73. CACYBP ENSGALG00000004554 7320 0.797 - - - - - - 0.797 - - - calcyclin binding protein [Source:HGNC Symbol;Acc:HGNC:30423]
74. CYFIP1 ENSGALG00000016736 6701 0.796 - - - - - - 0.796 - - - cytoplasmic FMR1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:13759]
75. CETN1 ENSGALG00000026741 7243 0.795 - - - - - - 0.795 - - - centrin 1 [Source:NCBI gene;Acc:422668]
76. YME1L1 ENSGALG00000007492 8652 0.795 - - - - - - - 0.795 - - YME1 like 1 ATPase [Source:NCBI gene;Acc:428418]
77. CCNG2 ENSGALG00000010347 9122 0.794 - - - - - - - 0.794 - - cyclin G2 [Source:HGNC Symbol;Acc:HGNC:1593]
78. DYNC1I2 ENSGALG00000009551 5420 0.794 - - - - - - - 0.794 - - dynein cytoplasmic 1 intermediate chain 2 [Source:NCBI gene;Acc:424151]
79. CEP70 ENSGALG00000012087 7992 0.793 - - - - - - 0.793 - - - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
80. CACNA2D2 ENSGALG00000038242 2078 0.793 - - - - - - - - - 0.793 calcium voltage-gated channel auxiliary subunit alpha2delta 2 [Source:HGNC Symbol;Acc:HGNC:1400]
81. ADCY2 ENSGALG00000013060 164 0.793 - - - - - 0.793 - - - - adenylate cyclase 2 [Source:HGNC Symbol;Acc:HGNC:233]
82. POLR3E ENSGALG00000007008 4010 0.793 - - - - - - - 0.793 - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
83. NENF ENSGALG00000009821 4826 0.793 - - - - - - - 0.793 - - neudesin neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:30384]
84. HSDL2 ENSGALG00000015663 8966 0.792 - - - - - - 0.792 - - - hydroxysteroid dehydrogenase like 2 [Source:HGNC Symbol;Acc:HGNC:18572]
85. PSMF1 ENSGALG00000000259 5782 0.792 - - - - - - - 0.792 - - proteasome inhibitor subunit 1 [Source:NCBI gene;Acc:430115]
86. CCT7 ENSGALG00000016088 2824 0.792 - - - - - - - - - 0.792 chaperonin containing TCP1 subunit 7 [Source:NCBI gene;Acc:428806]
87. SRSF5 ENSGALG00000009421 8502 0.79 - - - - - - - 0.790 - - serine and arginine rich splicing factor 5 [Source:NCBI gene;Acc:423258]
88. ATP5A1 ATP5A1 32367 0.789 - - - - - - - 0.789 - -
89. TTLL7 ENSGALG00000008850 49 0.789 - - - - - 0.789 - - - - tubulin tyrosine ligase like 7 [Source:HGNC Symbol;Acc:HGNC:26242]
90. TMEM87A ENSGALG00000009018 8027 0.789 - - - - - - 0.789 - - - transmembrane protein 87A [Source:HGNC Symbol;Acc:HGNC:24522]
91. PCID2 ENSGALG00000016831 57 0.788 - - - - - 0.788 - - - - PCI domain containing 2 [Source:NCBI gene;Acc:418745]
92. LARS ENSGALG00000007494 13966 0.787 - - - - - - - 0.787 - - leucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:6512]
93. SRGAP1 ENSGALG00000009825 6753 0.787 - - - - - - 0.787 - - - SLIT-ROBO Rho GTPase activating protein 1 [Source:NCBI gene;Acc:417821]
94. CAMSAP2 ENSGALG00000002145 6109 0.786 - - - - - - 0.786 - - - calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
95. PPP2R2A ENSGALG00000000235 4263 0.785 - - - - - - - 0.785 - - protein phosphatase 2 regulatory subunit Balpha [Source:NCBI gene;Acc:419523]
96. SH3BGRL ENSGALG00000007128 18708 0.784 - - - - - - - 0.784 - - SH3 domain binding glutamate rich protein like [Source:NCBI gene;Acc:422277]
97. KIAA0408 ENSGALG00000030211 934 0.784 - - - - - 0.784 - - - - KIAA0408 [Source:HGNC Symbol;Acc:HGNC:21636]
98. gga-mir-6703 ENSGALG00000029026 124 0.783 - - - - - 0.783 - - - - gga-mir-6703 [Source:miRBase;Acc:MI0022525]
99. ZADH2 ENSGALG00000022882 11790 0.783 - - - - - - - 0.783 - - zinc binding alcohol dehydrogenase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28697]
100. WBSCR22 6082 0.782 - - - - - - - 0.782 - - Williams-Beuren syndrome chromosome region 22

There are 534 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA